797 lines
54 KiB
Plaintext
797 lines
54 KiB
Plaintext
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* * * * * * * * * * * * * * * * * * * * * * * * *
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* * *
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* * Program: LaGriT V3.3.3 Linux *
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* * Date Compile: 2023/12/20 *
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* * Run Time: 2023/Dec 21 12:46:05 *
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* * Manual: https://lagrit.lanl.gov *
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* * *
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* * * * * * * * * * * * * * * * * * * * * * * * *
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-----oOo-----
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LaGriT V3 LA-CC-15-069 https://github.com/lanl/LaGriT
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Copyright 2016. Triad National Security, LLC. All rights reserved. This
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program was produced under U.S. Government contract 89233218CNA000001
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for Los Alamos National Laboratory (LANL), which is operated by Triad
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National Security, LLC for the U.S. Department of Energy/National Nuclear
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Security Administration. All rights in the program are reserved by Triad
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National Security, LLC, and the U.S. Department of Energy/National Nuclear
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Security Administration. The Government is granted for itself and others
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acting on its behalf a nonexclusive, paid-up, irrevocable worldwide license
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in this material to reproduce, prepare derivative works, distribute copies
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to the public, perform publicly and display publicly, and to permit others to
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do so. This software is open source and available under the BSD-3 License.
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-----oOo-----
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Output log file: lagrit.out
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Command log file: lagrit.log
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# LaGriT V3.2+
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# Test pflotran and stor options
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# for writing geometric coef matrix
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#
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******* 2D ****************************************
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* 1 meter width
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cmo/create/motri///triplane
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createpts/xyz/2 2 1/0. 0. 0./1. 1. 0./1 1 1
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RZ GENERATED POINTS 1 TO 4
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cmo/setatt/motri/imt/1 0 0/1
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Warning: nelements = 0
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4 values reset for attribute imt1
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connect
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Coordinates of enclosing triangle are:
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-0.17500D+01-0.16000D+01 0.00000D+00
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0.27500D+01-0.17500D+01 0.00000D+00
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0.50500D+00 0.50000D+01 0.00000D+00
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Successfully eliminated all multimaterial connections.
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The mesh is now complete!
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LaGriT FINISH: connect
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recon/0
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RECON2D reconnection loop2d: 1
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RECON: done.
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finish
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LaGriT FINISH: recon 0 for connect 2d
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rmpoint compress
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0 points removed and 0 elements removed.
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RMPOINT: new point count is 4
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RMPOINT: new element count is 2
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resetpts/itp
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geniee
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finish
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dump avs tmp_tri_1x1m.inp motri 1 1 0 0
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cmo/modatt/-def-/-def-/ioflag/x
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finish
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quality
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epsilonl, epsilonaspect: 3.1401849E-13 3.0964614E-38
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--------------------------------------------
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elements with aspect ratio < .01: 0
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elements with aspect ratio b/w .01 and .02: 0
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elements with aspect ratio b/w .02 and .05: 0
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elements with aspect ratio b/w .05 and .1 : 0
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elements with aspect ratio b/w .1 and .2 : 0
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elements with aspect ratio b/w .2 and .5 : 0
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elements with aspect ratio b/w .5 and 1. : 2
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min aspect ratio = 0.8284E+00 max aspect ratio = 0.8284E+00
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epsilonvol: 4.4408921E-13
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---------------------------------------
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All elements have volume 5.0000000E-01
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-----------------------------------------------------------
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2 total elements evaluated.
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*****************
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dump/stor/out_tri_1x1m/motri
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***Construct Regular Sparse Matrix:2D***
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------------
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Matbldtri
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Number of Nodes = 4
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Max. Connection to a Node = 4
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Number of Area Coefficients = 14
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Minimum Voronoi area = 2.5000000E-01
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Maximum Voronoi area = 2.5000000E-01
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Minimum Voronoi edge length = 0.0000000E+00
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Maximum Voronoi edge length = 5.0000000E-01
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Total Voronoi area = 1.0000000E+00
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Total Triangle area = 1.0000000E+00
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Matbldtri writing FEHM stor format.
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*** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL ***
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2D Matrix Coefficient file written with name out_tri_1x1m.stor
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******************
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dump/pflotran/out_tri_1x1m/motri
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***Construct Regular Sparse Matrix:2D***
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------------
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Matbldtri
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Number of Nodes = 4
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Max. Connection to a Node = 4
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Number of Area Coefficients = 14
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Minimum Voronoi area = 2.5000000E-01
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Maximum Voronoi area = 2.5000000E-01
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Minimum Voronoi edge length = 0.0000000E+00
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Maximum Voronoi edge length = 5.0000000E-01
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Total Voronoi area = 1.0000000E+00
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Total Triangle area = 1.0000000E+00
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Matbldtri writing PFLOTRAN format.
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PFLOTRAN total CELL nodes = 4
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PFLOTRAN will filter zero coefs.
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PFLOTRAN coefficient from matbld Aij/Xij max = 5.0000000E-01
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PFLOTRAN filter = epsilon * abs(max Aij/Xij) : 1.0000000E-12 5.0000000E-01
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PFLOTRAN coefficients: epsilon for zero filter = 5.0000000E-13
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PFLOTRAN total matbld matrix coefficients = 14
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PFLOTRAN matrix i>j (written) = 5
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PFLOTRAN matrix i<=j (not written) = 9
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PFLOTRAN zero coefs < epsilon (not written) = 1
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PFLOTRAN total CONNECTIONS written = 4
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PFLOTRAN Warning: ij count differs from num written.
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PFLOTRAN coefficient Aij min = 5.0000000E-01
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PFLOTRAN coefficient Aij max = 5.0000000E-01
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*** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL ***
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2D Matrix Coefficient file written with name out_tri_1x1m.uge
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*****************
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dump/pflotran/out_tri_1x1m_0/motri/nofilter_zero
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***Construct Regular Sparse Matrix:2D***
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------------
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Matbldtri
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Number of Nodes = 4
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Max. Connection to a Node = 4
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Number of Area Coefficients = 14
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Minimum Voronoi area = 2.5000000E-01
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Maximum Voronoi area = 2.5000000E-01
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Minimum Voronoi edge length = 0.0000000E+00
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Maximum Voronoi edge length = 5.0000000E-01
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Total Voronoi area = 1.0000000E+00
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Total Triangle area = 1.0000000E+00
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Matbldtri writing PFLOTRAN format.
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PFLOTRAN total CELL nodes = 4
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PFLOTRAN will not filter zero coefs.
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PFLOTRAN coefficient from matbld Aij/Xij max = 5.0000000E-01
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PFLOTRAN total matbld matrix coefficients = 14
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PFLOTRAN matrix i>j (written) = 5
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PFLOTRAN matrix i<=j (not written) = 9
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PFLOTRAN zero coefs < epsilon (written) = 1
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PFLOTRAN total CONNECTIONS written = 5
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PFLOTRAN coefficient Aij min = 0.0000000E+00
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PFLOTRAN coefficient Aij max = 5.0000000E-01
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*** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL ***
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2D Matrix Coefficient file written with name out_tri_1x1m_0.uge
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*****************
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* 2 meter width
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cmo delete motri
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Released Mesh Object: motri
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cmo/create/motri///triplane
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createpts/xyz/2 2 1/0. 0. 0./2. 2. 0./1 1 1
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RZ GENERATED POINTS 1 TO 4
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cmo/setatt/motri/imt/1 0 0/1
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Warning: nelements = 0
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4 values reset for attribute imt1
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connect
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Coordinates of enclosing triangle are:
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-0.35000D+01-0.32000D+01 0.00000D+00
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0.55000D+01-0.35000D+01 0.00000D+00
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0.10100D+01 0.10000D+02 0.00000D+00
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Successfully eliminated all multimaterial connections.
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The mesh is now complete!
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LaGriT FINISH: connect
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recon/0
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RECON2D reconnection loop2d: 1
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RECON: done.
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finish
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LaGriT FINISH: recon 0 for connect 2d
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rmpoint compress
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0 points removed and 0 elements removed.
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RMPOINT: new point count is 4
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RMPOINT: new element count is 2
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resetpts/itp
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geniee
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finish
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dump avs tmp_tri_2x2m.inp motri 1 1 0 0
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cmo/modatt/-def-/-def-/ioflag/x
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finish
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quality
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epsilonl, epsilonaspect: 6.2803698E-13 2.4771691E-37
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--------------------------------------------
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elements with aspect ratio < .01: 0
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elements with aspect ratio b/w .01 and .02: 0
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elements with aspect ratio b/w .02 and .05: 0
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elements with aspect ratio b/w .05 and .1 : 0
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elements with aspect ratio b/w .1 and .2 : 0
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elements with aspect ratio b/w .2 and .5 : 0
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elements with aspect ratio b/w .5 and 1. : 2
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min aspect ratio = 0.8284E+00 max aspect ratio = 0.8284E+00
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epsilonvol: 1.7763568E-12
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---------------------------------------
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All elements have volume 2.0000000E+00
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-----------------------------------------------------------
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2 total elements evaluated.
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*****************
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dump/stor/out_tri_2x2m/motri
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***Construct Regular Sparse Matrix:2D***
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------------
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Matbldtri
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Number of Nodes = 4
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Max. Connection to a Node = 4
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Number of Area Coefficients = 14
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Minimum Voronoi area = 1.0000000E+00
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Maximum Voronoi area = 1.0000000E+00
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Minimum Voronoi edge length = 0.0000000E+00
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Maximum Voronoi edge length = 5.0000000E-01
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Total Voronoi area = 4.0000000E+00
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Total Triangle area = 4.0000000E+00
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Matbldtri writing FEHM stor format.
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*** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL ***
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2D Matrix Coefficient file written with name out_tri_2x2m.stor
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*****************
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dump/pflotran/out_tri_2x2m/motri
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***Construct Regular Sparse Matrix:2D***
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------------
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Matbldtri
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Number of Nodes = 4
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Max. Connection to a Node = 4
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Number of Area Coefficients = 14
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Minimum Voronoi area = 1.0000000E+00
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Maximum Voronoi area = 1.0000000E+00
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Minimum Voronoi edge length = 0.0000000E+00
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Maximum Voronoi edge length = 5.0000000E-01
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Total Voronoi area = 4.0000000E+00
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Total Triangle area = 4.0000000E+00
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Matbldtri writing PFLOTRAN format.
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PFLOTRAN total CELL nodes = 4
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PFLOTRAN will filter zero coefs.
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PFLOTRAN coefficient from matbld Aij/Xij max = 5.0000000E-01
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PFLOTRAN filter = epsilon * abs(max Aij/Xij) : 1.0000000E-12 5.0000000E-01
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PFLOTRAN coefficients: epsilon for zero filter = 5.0000000E-13
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PFLOTRAN total matbld matrix coefficients = 14
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PFLOTRAN matrix i>j (written) = 5
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PFLOTRAN matrix i<=j (not written) = 9
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PFLOTRAN zero coefs < epsilon (not written) = 1
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PFLOTRAN total CONNECTIONS written = 4
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PFLOTRAN Warning: ij count differs from num written.
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PFLOTRAN coefficient Aij min = 1.0000000E+00
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PFLOTRAN coefficient Aij max = 1.0000000E+00
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*** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL ***
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2D Matrix Coefficient file written with name out_tri_2x2m.uge
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*****************
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dump/pflotran/out_tri_2x2m_0/motri/nofilter_zero
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***Construct Regular Sparse Matrix:2D***
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------------
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Matbldtri
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Number of Nodes = 4
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Max. Connection to a Node = 4
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Number of Area Coefficients = 14
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Minimum Voronoi area = 1.0000000E+00
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Maximum Voronoi area = 1.0000000E+00
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Minimum Voronoi edge length = 0.0000000E+00
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Maximum Voronoi edge length = 5.0000000E-01
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Total Voronoi area = 4.0000000E+00
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Total Triangle area = 4.0000000E+00
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Matbldtri writing PFLOTRAN format.
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PFLOTRAN total CELL nodes = 4
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PFLOTRAN will not filter zero coefs.
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PFLOTRAN coefficient from matbld Aij/Xij max = 5.0000000E-01
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PFLOTRAN total matbld matrix coefficients = 14
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PFLOTRAN matrix i>j (written) = 5
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PFLOTRAN matrix i<=j (not written) = 9
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PFLOTRAN zero coefs < epsilon (written) = 1
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PFLOTRAN total CONNECTIONS written = 5
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PFLOTRAN coefficient Aij min = 0.0000000E+00
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PFLOTRAN coefficient Aij max = 1.0000000E+00
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*** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL ***
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2D Matrix Coefficient file written with name out_tri_2x2m_0.uge
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*****************
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* 3 x 4 nodes
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cmo delete motri
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Released Mesh Object: motri
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cmo/create/motri///triplane
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createpts/xyz/3 4 1/0. 0. 0./2. 2. 0./1 1 1
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RZ GENERATED POINTS 1 TO 12
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cmo/setatt/motri/imt/1 0 0/1
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Warning: nelements = 0
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12 values reset for attribute imt1
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connect
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Coordinates of enclosing triangle are:
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-0.35000D+01-0.32000D+01 0.00000D+00
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0.55000D+01-0.35000D+01 0.00000D+00
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0.10100D+01 0.10000D+02 0.00000D+00
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Successfully eliminated all multimaterial connections.
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The mesh is now complete!
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||
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LaGriT FINISH: connect
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recon/0
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RECON2D reconnection loop2d: 1
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RECON: done.
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||
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finish
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||
|
|
LaGriT FINISH: recon 0 for connect 2d
|
||
|
|
|
||
|
|
rmpoint compress
|
||
|
|
0 points removed and 0 elements removed.
|
||
|
|
RMPOINT: new point count is 12
|
||
|
|
RMPOINT: new element count is 12
|
||
|
|
resetpts/itp
|
||
|
|
geniee
|
||
|
|
finish
|
||
|
|
dump avs tmp_tri_3x4_pts.inp motri 1 1 0 0
|
||
|
|
cmo/modatt/-def-/-def-/ioflag/x
|
||
|
|
finish
|
||
|
|
quality
|
||
|
|
|
||
|
|
epsilonl, epsilonaspect: 6.2803698E-13 2.4771691E-37
|
||
|
|
--------------------------------------------
|
||
|
|
elements with aspect ratio < .01: 0
|
||
|
|
elements with aspect ratio b/w .01 and .02: 0
|
||
|
|
elements with aspect ratio b/w .02 and .05: 0
|
||
|
|
elements with aspect ratio b/w .05 and .1 : 0
|
||
|
|
elements with aspect ratio b/w .1 and .2 : 0
|
||
|
|
elements with aspect ratio b/w .2 and .5 : 0
|
||
|
|
elements with aspect ratio b/w .5 and 1. : 12
|
||
|
|
min aspect ratio = 0.7735E+00 max aspect ratio = 0.7735E+00
|
||
|
|
|
||
|
|
epsilonvol: 1.7763568E-12
|
||
|
|
---------------------------------------
|
||
|
|
All elements have volume 3.3333333E-01
|
||
|
|
-----------------------------------------------------------
|
||
|
|
12 total elements evaluated.
|
||
|
|
|
||
|
|
*****************
|
||
|
|
dump/stor/out_tri_3x4/motri
|
||
|
|
***Construct Regular Sparse Matrix:2D***
|
||
|
|
------------
|
||
|
|
Matbldtri
|
||
|
|
Number of Nodes = 12
|
||
|
|
Max. Connection to a Node = 7
|
||
|
|
Number of Area Coefficients = 58
|
||
|
|
Minimum Voronoi area = 1.6666667E-01
|
||
|
|
Maximum Voronoi area = 6.6666667E-01
|
||
|
|
Minimum Voronoi edge length = 0.0000000E+00
|
||
|
|
Maximum Voronoi edge length = 1.5000000E+00
|
||
|
|
Total Voronoi area = 4.0000000E+00
|
||
|
|
Total Triangle area = 4.0000000E+00
|
||
|
|
|
||
|
|
Matbldtri writing FEHM stor format.
|
||
|
|
|
||
|
|
*** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL ***
|
||
|
|
|
||
|
|
2D Matrix Coefficient file written with name out_tri_3x4.stor
|
||
|
|
|
||
|
|
*****************
|
||
|
|
dump/pflotran/out_tri_3x4/motri
|
||
|
|
***Construct Regular Sparse Matrix:2D***
|
||
|
|
------------
|
||
|
|
Matbldtri
|
||
|
|
Number of Nodes = 12
|
||
|
|
Max. Connection to a Node = 7
|
||
|
|
Number of Area Coefficients = 58
|
||
|
|
Minimum Voronoi area = 1.6666667E-01
|
||
|
|
Maximum Voronoi area = 6.6666667E-01
|
||
|
|
Minimum Voronoi edge length = 0.0000000E+00
|
||
|
|
Maximum Voronoi edge length = 1.5000000E+00
|
||
|
|
Total Voronoi area = 4.0000000E+00
|
||
|
|
Total Triangle area = 4.0000000E+00
|
||
|
|
|
||
|
|
Matbldtri writing PFLOTRAN format.
|
||
|
|
PFLOTRAN total CELL nodes = 12
|
||
|
|
PFLOTRAN will filter zero coefs.
|
||
|
|
PFLOTRAN coefficient from matbld Aij/Xij max = 1.5000000E+00
|
||
|
|
PFLOTRAN filter = epsilon * abs(max Aij/Xij) : 1.0000000E-12 1.5000000E+00
|
||
|
|
PFLOTRAN coefficients: epsilon for zero filter = 1.5000000E-12
|
||
|
|
PFLOTRAN total matbld matrix coefficients = 58
|
||
|
|
PFLOTRAN matrix i>j (written) = 23
|
||
|
|
PFLOTRAN matrix i<=j (not written) = 35
|
||
|
|
PFLOTRAN zero coefs < epsilon (not written) = 6
|
||
|
|
|
||
|
|
PFLOTRAN total CONNECTIONS written = 17
|
||
|
|
|
||
|
|
PFLOTRAN Warning: ij count differs from num written.
|
||
|
|
PFLOTRAN coefficient Aij min = 3.3333333E-01
|
||
|
|
PFLOTRAN coefficient Aij max = 1.0000000E+00
|
||
|
|
|
||
|
|
*** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL ***
|
||
|
|
|
||
|
|
2D Matrix Coefficient file written with name out_tri_3x4.uge
|
||
|
|
|
||
|
|
*****************
|
||
|
|
dump/pflotran/out_tri_3x4_0/motri/nofilter_zero
|
||
|
|
***Construct Regular Sparse Matrix:2D***
|
||
|
|
------------
|
||
|
|
Matbldtri
|
||
|
|
Number of Nodes = 12
|
||
|
|
Max. Connection to a Node = 7
|
||
|
|
Number of Area Coefficients = 58
|
||
|
|
Minimum Voronoi area = 1.6666667E-01
|
||
|
|
Maximum Voronoi area = 6.6666667E-01
|
||
|
|
Minimum Voronoi edge length = 0.0000000E+00
|
||
|
|
Maximum Voronoi edge length = 1.5000000E+00
|
||
|
|
Total Voronoi area = 4.0000000E+00
|
||
|
|
Total Triangle area = 4.0000000E+00
|
||
|
|
|
||
|
|
Matbldtri writing PFLOTRAN format.
|
||
|
|
PFLOTRAN total CELL nodes = 12
|
||
|
|
PFLOTRAN will not filter zero coefs.
|
||
|
|
PFLOTRAN coefficient from matbld Aij/Xij max = 1.5000000E+00
|
||
|
|
PFLOTRAN total matbld matrix coefficients = 58
|
||
|
|
PFLOTRAN matrix i>j (written) = 23
|
||
|
|
PFLOTRAN matrix i<=j (not written) = 35
|
||
|
|
PFLOTRAN zero coefs < epsilon (written) = 6
|
||
|
|
|
||
|
|
PFLOTRAN total CONNECTIONS written = 23
|
||
|
|
PFLOTRAN coefficient Aij min = 0.0000000E+00
|
||
|
|
PFLOTRAN coefficient Aij max = 1.0000000E+00
|
||
|
|
|
||
|
|
*** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL ***
|
||
|
|
|
||
|
|
2D Matrix Coefficient file written with name out_tri_3x4_0.uge
|
||
|
|
|
||
|
|
******* 3D ****************************************
|
||
|
|
* NOTE these hex meshes are connected into tets
|
||
|
|
* LaGriT does not write stor files for hex elements
|
||
|
|
* 1 meter width single
|
||
|
|
cmo delete mohex
|
||
|
|
Mesh Object release skipped, it does not exist: mohex
|
||
|
|
cmo/create/mohex
|
||
|
|
createpts/xyz/2 2 2/0. 0. 0./1. 1. 1./1 1 1
|
||
|
|
RZ GENERATED POINTS 1 TO 8
|
||
|
|
cmo/setatt/mohex/imt/1 0 0/1
|
||
|
|
Warning: nelements = 0
|
||
|
|
8 values reset for attribute imt1
|
||
|
|
|
||
|
|
connect
|
||
|
|
Coordinates of enclosing tetrahedron are:
|
||
|
|
-0.20000D+01 -0.75000D+00 -0.75000D+00
|
||
|
|
0.50000D+00 -0.75000D+00 0.42500D+01
|
||
|
|
0.30000D+01 -0.75000D+00 -0.75000D+00
|
||
|
|
0.50000D+00 0.42500D+01 0.50000D+00
|
||
|
|
|
||
|
|
Successfully eliminated all multimaterial connections.
|
||
|
|
|
||
|
|
The mesh is now complete!
|
||
|
|
|
||
|
|
LaGriT FINISH: connect
|
||
|
|
|
||
|
|
rmpoint compress
|
||
|
|
0 points removed and 0 elements removed.
|
||
|
|
RMPOINT: new point count is 8
|
||
|
|
RMPOINT: new element count is 6
|
||
|
|
resetpts/itp
|
||
|
|
geniee
|
||
|
|
finish
|
||
|
|
dump avs tmp_hex_1x1m.inp mohex 1 1 0 0
|
||
|
|
cmo/modatt/-def-/-def-/ioflag/x
|
||
|
|
finish
|
||
|
|
quality
|
||
|
|
|
||
|
|
epsilonl, epsilonaspect: 3.8459254E-13 5.6885628E-38
|
||
|
|
--------------------------------------------
|
||
|
|
elements with aspect ratio < .01: 0
|
||
|
|
elements with aspect ratio b/w .01 and .02: 0
|
||
|
|
elements with aspect ratio b/w .02 and .05: 0
|
||
|
|
elements with aspect ratio b/w .05 and .1 : 0
|
||
|
|
elements with aspect ratio b/w .1 and .2 : 0
|
||
|
|
elements with aspect ratio b/w .2 and .5 : 0
|
||
|
|
elements with aspect ratio b/w .5 and 1. : 6
|
||
|
|
min aspect ratio = 0.6230E+00 max aspect ratio = 0.7321E+00
|
||
|
|
|
||
|
|
epsilonvol: 2.2204460E-13
|
||
|
|
---------------------------------------
|
||
|
|
All elements have volume 1.6666667E-01
|
||
|
|
-----------------------------------------------------------
|
||
|
|
6 total elements evaluated.
|
||
|
|
|
||
|
|
*****************
|
||
|
|
dump/stor/out_hex_1x1m/mohex
|
||
|
|
|
||
|
|
*** Construct and Compress Sparse Matrix:3D ***
|
||
|
|
*** Compress Area Coefficient Values ***
|
||
|
|
|
||
|
|
AMatbld3d_stor: Matrix compress_eps: 0.1000000E-07
|
||
|
|
AMatbld3d_stor: Local epsilon: 0.1000000E-14
|
||
|
|
AMatbld3d_stor: *****Zero Negative Coefficients ******
|
||
|
|
AMatbld3d_stor: Number of 'zero' (< compress_eps) coefs 0
|
||
|
|
AMatbld3d_stor: npoints = 8 ncoefs = 32
|
||
|
|
AMatbld3d_stor: Number of unique coefs = 2
|
||
|
|
AMatbld3d_stor: Maximum num. connections to a node = 4
|
||
|
|
AMatbld3d_stor: Volume min = 1.2500000E-01
|
||
|
|
AMatbld3d_stor: Volume max = 1.2500000E-01
|
||
|
|
AMatbld3d_stor: Total Volume: 1.0000000E+00
|
||
|
|
AMatbld3d_stor: abs(Aij/xij) min = 0.0000000E+00
|
||
|
|
AMatbld3d_stor: abs(Aij/xij) max = 2.5000000E-01
|
||
|
|
AMatbld3d_stor: (Aij/xij) max = 0.0000000E+00
|
||
|
|
AMatbld3d_stor: (Aij/xij) min = -2.5000000E-01
|
||
|
|
AMatbld3d_stor Matrix coefficient values stored as scalar area/distance
|
||
|
|
AMatbld3d_stor Matrix compression used for graph and coefficient values
|
||
|
|
ascii STOR file written with name out_hex_1x1m.stor
|
||
|
|
|
||
|
|
*** SPARSE COEFFICIENT MATRIX _astor SUCCESSFUL ***
|
||
|
|
|
||
|
|
3D Matrix Coefficient file written with name out_hex_1x1m.stor
|
||
|
|
|
||
|
|
*****************
|
||
|
|
dump/pflotran/out_hex_1x1m/mohex
|
||
|
|
|
||
|
|
*** Construct and Compress Sparse Matrix:3D ***
|
||
|
|
*** Compress Area Coefficient Values ***
|
||
|
|
|
||
|
|
AMatbld3d_stor: Matrix compress_eps: 0.1000000E-07
|
||
|
|
AMatbld3d_stor: Local epsilon: 0.1000000E-14
|
||
|
|
AMatbld3d_stor: *****Zero Negative Coefficients ******
|
||
|
|
AMatbld3d_stor: Number of 'zero' (< compress_eps) coefs 0
|
||
|
|
AMatbld3d_stor: npoints = 8 ncoefs = 32
|
||
|
|
AMatbld3d_stor: Number of unique coefs = 2
|
||
|
|
AMatbld3d_stor: Maximum num. connections to a node = 4
|
||
|
|
PFLOTRAN total CELL nodes = 8
|
||
|
|
AMatbld3d_stor: Volume min = 1.2500000E-01
|
||
|
|
AMatbld3d_stor: Volume max = 1.2500000E-01
|
||
|
|
AMatbld3d_stor: Total Volume: 1.0000000E+00
|
||
|
|
AMatbld3d_stor: abs(Aij/xij) min = 0.0000000E+00
|
||
|
|
AMatbld3d_stor: abs(Aij/xij) max = 2.5000000E-01
|
||
|
|
AMatbld3d_stor: (Aij/xij) max = 0.0000000E+00
|
||
|
|
AMatbld3d_stor: (Aij/xij) min = -2.5000000E-01
|
||
|
|
PFLOTRAN will filter zero coefs.
|
||
|
|
PFLOTRAN coefficient from matbld Aij/Xij max = 0.0000000E+00
|
||
|
|
PFLOTRAN filter = epsilon * abs(max Aij/Xij) : 1.0000000E-12 0.0000000E+00
|
||
|
|
PFLOTRAN coefficients: epsilon for zero filter = 1.0000000E-12
|
||
|
|
PFLOTRAN total matbld matrix coefficients = 32
|
||
|
|
PFLOTRAN matrix i>j (written) = 12
|
||
|
|
PFLOTRAN matrix i<=j (not written) = 20
|
||
|
|
PFLOTRAN zero coefs < epsilon (not written) = 0
|
||
|
|
|
||
|
|
PFLOTRAN total CONNECTIONS written = 12
|
||
|
|
PFLOTRAN coefficient Aij min = 2.5000000E-01
|
||
|
|
PFLOTRAN coefficient Aij max = 2.5000000E-01
|
||
|
|
AMatbld3d_stor Matrix coefficient values stored as scalar area/distance
|
||
|
|
|
||
|
|
*** SPARSE COEFFICIENT MATRIX for PFLOTRAN SUCCESSFUL ***
|
||
|
|
|
||
|
|
3D Matrix Coefficient file written with name out_hex_1x1m.uge
|
||
|
|
|
||
|
|
*****************
|
||
|
|
dump/pflotran/out_hex_1x1m_0/mohex/nofilter_zero
|
||
|
|
|
||
|
|
*** Construct and Compress Sparse Matrix:3D ***
|
||
|
|
*** Compress Area Coefficient Values ***
|
||
|
|
|
||
|
|
AMatbld3d_stor: Matrix compress_eps: 0.1000000E-07
|
||
|
|
AMatbld3d_stor: Local epsilon: 0.1000000E-14
|
||
|
|
AMatbld3d_stor: *****Zero Negative Coefficients ******
|
||
|
|
AMatbld3d_stor: Number of 'zero' (< compress_eps) coefs 0
|
||
|
|
AMatbld3d_stor: npoints = 8 ncoefs = 32
|
||
|
|
AMatbld3d_stor: Number of unique coefs = 2
|
||
|
|
AMatbld3d_stor: Maximum num. connections to a node = 4
|
||
|
|
PFLOTRAN total CELL nodes = 8
|
||
|
|
AMatbld3d_stor: Volume min = 1.2500000E-01
|
||
|
|
AMatbld3d_stor: Volume max = 1.2500000E-01
|
||
|
|
AMatbld3d_stor: Total Volume: 1.0000000E+00
|
||
|
|
AMatbld3d_stor: abs(Aij/xij) min = 0.0000000E+00
|
||
|
|
AMatbld3d_stor: abs(Aij/xij) max = 2.5000000E-01
|
||
|
|
AMatbld3d_stor: (Aij/xij) max = 0.0000000E+00
|
||
|
|
AMatbld3d_stor: (Aij/xij) min = -2.5000000E-01
|
||
|
|
PFLOTRAN will not filter zero coefs.
|
||
|
|
PFLOTRAN coefficient from matbld Aij/Xij max = 0.0000000E+00
|
||
|
|
PFLOTRAN total matbld matrix coefficients = 32
|
||
|
|
PFLOTRAN matrix i>j (written) = 12
|
||
|
|
PFLOTRAN matrix i<=j (not written) = 20
|
||
|
|
PFLOTRAN zero coefs < epsilon (written) = 0
|
||
|
|
|
||
|
|
PFLOTRAN total CONNECTIONS written = 12
|
||
|
|
PFLOTRAN coefficient Aij min = 2.5000000E-01
|
||
|
|
PFLOTRAN coefficient Aij max = 2.5000000E-01
|
||
|
|
AMatbld3d_stor Matrix coefficient values stored as scalar area/distance
|
||
|
|
|
||
|
|
*** SPARSE COEFFICIENT MATRIX for PFLOTRAN SUCCESSFUL ***
|
||
|
|
|
||
|
|
3D Matrix Coefficient file written with name out_hex_1x1m_0.uge
|
||
|
|
|
||
|
|
*****************
|
||
|
|
****************
|
||
|
|
* Sample slanted box mesh from Satish for testing
|
||
|
|
* Note differences for voronoi Aij on boundaries
|
||
|
|
* matbld voronoi volumes do not go beyond the mesh boundary
|
||
|
|
* so an edge node can have half a voronoi volume
|
||
|
|
read input_sample_tet.inp motet
|
||
|
|
read/avs/input_sample_tet.inp/motet
|
||
|
|
cmo/addatt/motet/id_in/VINT/scalar/nnodes/linear/permanent/gxaf/0.0
|
||
|
|
finish
|
||
|
|
geniee
|
||
|
|
finish
|
||
|
|
cmo/status/brief
|
||
|
|
|
||
|
|
The current-mesh-object(CMO) is: motet
|
||
|
|
|
||
|
|
1 Mesh Object name: motri
|
||
|
|
number of nodes = 12 number of elements = 12
|
||
|
|
dimensions geometry = 2 element type = tri
|
||
|
|
dimensions topology = 2 3 nodes 3 faces 3 edges
|
||
|
|
boundary flag = 16000000 status = inactive
|
||
|
|
|
||
|
|
2 Mesh Object name: mohex
|
||
|
|
number of nodes = 8 number of elements = 6
|
||
|
|
dimensions geometry = 3 element type = tet
|
||
|
|
dimensions topology = 3 4 nodes 4 faces 6 edges
|
||
|
|
boundary flag = 16000000 status = inactive
|
||
|
|
|
||
|
|
3 Mesh Object name: motet
|
||
|
|
number of nodes = 60 number of elements = 144
|
||
|
|
dimensions geometry = 3 element type = tet
|
||
|
|
dimensions topology = 3 4 nodes 4 faces 6 edges
|
||
|
|
boundary flag = 16000000 status = active
|
||
|
|
|
||
|
|
|
||
|
|
finish
|
||
|
|
finish
|
||
|
|
*****************
|
||
|
|
dump/stor/out_sample_tet/motet
|
||
|
|
|
||
|
|
*** Construct and Compress Sparse Matrix:3D ***
|
||
|
|
*** Compress Area Coefficient Values ***
|
||
|
|
|
||
|
|
AMatbld3d_stor: Matrix compress_eps: 0.1000000E-07
|
||
|
|
AMatbld3d_stor: Local epsilon: 0.1000000E-14
|
||
|
|
AMatbld3d_stor: *****Zero Negative Coefficients ******
|
||
|
|
AMatbld3d_stor: Number of 'zero' (< compress_eps) coefs 0
|
||
|
|
AMatbld3d_stor: npoints = 60 ncoefs = 570
|
||
|
|
AMatbld3d_stor: Number of unique coefs = 163
|
||
|
|
AMatbld3d_stor: Maximum num. connections to a node = 15
|
||
|
|
AMatbld3d_stor: Volume min = 1.9214006E+02
|
||
|
|
AMatbld3d_stor: Volume max = 3.1199559E+03
|
||
|
|
AMatbld3d_stor: Total Volume: 6.6240000E+04
|
||
|
|
AMatbld3d_stor: abs(Aij/xij) min = 0.0000000E+00
|
||
|
|
AMatbld3d_stor: abs(Aij/xij) max = 2.1147826E+01
|
||
|
|
AMatbld3d_stor: (Aij/xij) max = 0.0000000E+00
|
||
|
|
AMatbld3d_stor: (Aij/xij) min = -2.1147826E+01
|
||
|
|
AMatbld3d_stor Matrix coefficient values stored as scalar area/distance
|
||
|
|
AMatbld3d_stor Matrix compression used for graph and coefficient values
|
||
|
|
ascii STOR file written with name out_sample_tet.stor
|
||
|
|
|
||
|
|
*** SPARSE COEFFICIENT MATRIX _astor SUCCESSFUL ***
|
||
|
|
|
||
|
|
3D Matrix Coefficient file written with name out_sample_tet.stor
|
||
|
|
|
||
|
|
*****************
|
||
|
|
dump pflotran out_sample_tet motet
|
||
|
|
|
||
|
|
*** Construct and Compress Sparse Matrix:3D ***
|
||
|
|
*** Compress Area Coefficient Values ***
|
||
|
|
|
||
|
|
AMatbld3d_stor: Matrix compress_eps: 0.1000000E-07
|
||
|
|
AMatbld3d_stor: Local epsilon: 0.1000000E-14
|
||
|
|
AMatbld3d_stor: *****Zero Negative Coefficients ******
|
||
|
|
AMatbld3d_stor: Number of 'zero' (< compress_eps) coefs 0
|
||
|
|
AMatbld3d_stor: npoints = 60 ncoefs = 570
|
||
|
|
AMatbld3d_stor: Number of unique coefs = 163
|
||
|
|
AMatbld3d_stor: Maximum num. connections to a node = 15
|
||
|
|
PFLOTRAN total CELL nodes = 60
|
||
|
|
AMatbld3d_stor: Volume min = 1.9214006E+02
|
||
|
|
AMatbld3d_stor: Volume max = 3.1199559E+03
|
||
|
|
AMatbld3d_stor: Total Volume: 6.6240000E+04
|
||
|
|
AMatbld3d_stor: abs(Aij/xij) min = 0.0000000E+00
|
||
|
|
AMatbld3d_stor: abs(Aij/xij) max = 2.1147826E+01
|
||
|
|
AMatbld3d_stor: (Aij/xij) max = 0.0000000E+00
|
||
|
|
AMatbld3d_stor: (Aij/xij) min = -2.1147826E+01
|
||
|
|
PFLOTRAN will filter zero coefs.
|
||
|
|
PFLOTRAN coefficient from matbld Aij/Xij max = 0.0000000E+00
|
||
|
|
PFLOTRAN filter = epsilon * abs(max Aij/Xij) : 1.0000000E-12 0.0000000E+00
|
||
|
|
PFLOTRAN coefficients: epsilon for zero filter = 1.0000000E-12
|
||
|
|
PFLOTRAN total matbld matrix coefficients = 570
|
||
|
|
PFLOTRAN matrix i>j (written) = 255
|
||
|
|
PFLOTRAN matrix i<=j (not written) = 315
|
||
|
|
PFLOTRAN zero coefs < epsilon (not written) = 0
|
||
|
|
|
||
|
|
PFLOTRAN total CONNECTIONS written = 255
|
||
|
|
PFLOTRAN coefficient Aij min = 3.2063536E+00
|
||
|
|
PFLOTRAN coefficient Aij max = 2.2305694E+02
|
||
|
|
AMatbld3d_stor Matrix coefficient values stored as scalar area/distance
|
||
|
|
|
||
|
|
*** SPARSE COEFFICIENT MATRIX for PFLOTRAN SUCCESSFUL ***
|
||
|
|
|
||
|
|
3D Matrix Coefficient file written with name out_sample_tet.uge
|
||
|
|
|
||
|
|
*****************
|
||
|
|
cmo/printatt/motet/-all- minmax
|
||
|
|
ATTRIBUTE NAME MIN MAX DIFFERENCE LENGTH
|
||
|
|
-def- 0.000000000E+00 0.000000000E+00 0.000000000E+00 60
|
||
|
|
scalar 1 1 0 1
|
||
|
|
vector 3 3 0 1
|
||
|
|
nnodes 60 60 0 1
|
||
|
|
nedges 0 0 0 1
|
||
|
|
nfaces 0 0 0 1
|
||
|
|
nelements 144 144 0 1
|
||
|
|
mbndry 16000000 16000000 0 1
|
||
|
|
ndimensions_topo 3 3 0 1
|
||
|
|
ndimensions_geom 3 3 0 1
|
||
|
|
nodes_per_element 4 4 0 1
|
||
|
|
edges_per_element 6 6 0 1
|
||
|
|
faces_per_element 4 4 0 1
|
||
|
|
isetwd 0 0 0 60
|
||
|
|
ialias 0 0 0 60
|
||
|
|
imt1 1 1 0 60
|
||
|
|
itp1 0 10 10 60
|
||
|
|
icr1 0 0 0 60
|
||
|
|
isn1 0 0 0 60
|
||
|
|
xic 1.000000000E+00 6.000000000E+01 5.900000000E+01 60
|
||
|
|
yic 5.000000000E+00 5.300000000E+01 4.800000000E+01 60
|
||
|
|
zic 6.500000000E+00 4.100000000E+01 3.450000000E+01 60
|
||
|
|
xtetwd 0 0 0 144
|
||
|
|
itetclr 1 1 0 144
|
||
|
|
itettyp 5 5 0 144
|
||
|
|
itetoff 0 572 572 144
|
||
|
|
jtetoff 0 572 572 144
|
||
|
|
itet 1 60 59 144x4
|
||
|
|
jtet 1 16000000 15999999 144x4
|
||
|
|
epsilon 1.000000004E-15 1.000000004E-15 0.000000000E+00 1
|
||
|
|
epsilonl 1.854471291E-11 1.854471291E-11 0.000000000E+00 1
|
||
|
|
epsilona 1.548816631E-09 1.548816631E-09 0.000000000E+00 1
|
||
|
|
epsilonv 2.169464608E-08 2.169464608E-08 0.000000000E+00 1
|
||
|
|
ipointi 1 1 0 1
|
||
|
|
ipointj 60 60 0 1
|
||
|
|
idebug 0 0 0 1
|
||
|
|
itypconv_sm 1 1 0 1
|
||
|
|
maxiter_sm 25 25 0 1
|
||
|
|
tolconv_sm 1.000000000E+00 1.000000000E+00 0.000000000E+00 1
|
||
|
|
nnfreq 1 1 0 1
|
||
|
|
ivoronoi 1 1 0 1
|
||
|
|
iopt2to2 2 2 0 1
|
||
|
|
xmin 1.000000000E+00 1.000000000E+00 0.000000000E+00 1
|
||
|
|
ymin 5.000000000E+00 5.000000000E+00 0.000000000E+00 1
|
||
|
|
zmin 6.500000000E+00 6.500000000E+00 0.000000000E+00 1
|
||
|
|
xmax 6.000000000E+01 6.000000000E+01 0.000000000E+00 1
|
||
|
|
ymax 5.300000000E+01 5.300000000E+01 0.000000000E+00 1
|
||
|
|
zmax 4.100000000E+01 4.100000000E+01 0.000000000E+00 1
|
||
|
|
kdtree_level 0 0 0 1
|
||
|
|
max_number_sets 64 64 0 1
|
||
|
|
number_of_psets 0 0 0 1
|
||
|
|
number_of_eltsets 0 0 0 1
|
||
|
|
number_of_fsets 0 0 0 1
|
||
|
|
id_in 1 60 59 60
|
||
|
|
|
||
|
|
finish
|
||
|
|
LaGriT successfully completed
|