* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Program: LaGriT V3.3.3 Linux * * * Date Compile: 2023/12/20 * * * Run Time: 2023/Dec 21 12:46:05 * * * Manual: https://lagrit.lanl.gov * * * * * * * * * * * * * * * * * * * * * * * * * * * * * -----oOo----- LaGriT V3 LA-CC-15-069 https://github.com/lanl/LaGriT Copyright 2016. Triad National Security, LLC. All rights reserved. This program was produced under U.S. Government contract 89233218CNA000001 for Los Alamos National Laboratory (LANL), which is operated by Triad National Security, LLC for the U.S. Department of Energy/National Nuclear Security Administration. All rights in the program are reserved by Triad National Security, LLC, and the U.S. Department of Energy/National Nuclear Security Administration. The Government is granted for itself and others acting on its behalf a nonexclusive, paid-up, irrevocable worldwide license in this material to reproduce, prepare derivative works, distribute copies to the public, perform publicly and display publicly, and to permit others to do so. This software is open source and available under the BSD-3 License. -----oOo----- Output log file: lagrit.out Command log file: lagrit.log # LaGriT V3.2+ # Test pflotran and stor options # for writing geometric coef matrix # ******* 2D **************************************** * 1 meter width cmo/create/motri///triplane createpts/xyz/2 2 1/0. 0. 0./1. 1. 0./1 1 1 RZ GENERATED POINTS 1 TO 4 cmo/setatt/motri/imt/1 0 0/1 Warning: nelements = 0 4 values reset for attribute imt1 connect Coordinates of enclosing triangle are: -0.17500D+01-0.16000D+01 0.00000D+00 0.27500D+01-0.17500D+01 0.00000D+00 0.50500D+00 0.50000D+01 0.00000D+00 Successfully eliminated all multimaterial connections. The mesh is now complete! LaGriT FINISH: connect recon/0 RECON2D reconnection loop2d: 1 RECON: done. finish LaGriT FINISH: recon 0 for connect 2d rmpoint compress 0 points removed and 0 elements removed. RMPOINT: new point count is 4 RMPOINT: new element count is 2 resetpts/itp geniee finish dump avs tmp_tri_1x1m.inp motri 1 1 0 0 cmo/modatt/-def-/-def-/ioflag/x finish quality epsilonl, epsilonaspect: 3.1401849E-13 3.0964614E-38 -------------------------------------------- elements with aspect ratio < .01: 0 elements with aspect ratio b/w .01 and .02: 0 elements with aspect ratio b/w .02 and .05: 0 elements with aspect ratio b/w .05 and .1 : 0 elements with aspect ratio b/w .1 and .2 : 0 elements with aspect ratio b/w .2 and .5 : 0 elements with aspect ratio b/w .5 and 1. : 2 min aspect ratio = 0.8284E+00 max aspect ratio = 0.8284E+00 epsilonvol: 4.4408921E-13 --------------------------------------- All elements have volume 5.0000000E-01 ----------------------------------------------------------- 2 total elements evaluated. ***************** dump/stor/out_tri_1x1m/motri ***Construct Regular Sparse Matrix:2D*** ------------ Matbldtri Number of Nodes = 4 Max. Connection to a Node = 4 Number of Area Coefficients = 14 Minimum Voronoi area = 2.5000000E-01 Maximum Voronoi area = 2.5000000E-01 Minimum Voronoi edge length = 0.0000000E+00 Maximum Voronoi edge length = 5.0000000E-01 Total Voronoi area = 1.0000000E+00 Total Triangle area = 1.0000000E+00 Matbldtri writing FEHM stor format. *** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL *** 2D Matrix Coefficient file written with name out_tri_1x1m.stor ****************** dump/pflotran/out_tri_1x1m/motri ***Construct Regular Sparse Matrix:2D*** ------------ Matbldtri Number of Nodes = 4 Max. Connection to a Node = 4 Number of Area Coefficients = 14 Minimum Voronoi area = 2.5000000E-01 Maximum Voronoi area = 2.5000000E-01 Minimum Voronoi edge length = 0.0000000E+00 Maximum Voronoi edge length = 5.0000000E-01 Total Voronoi area = 1.0000000E+00 Total Triangle area = 1.0000000E+00 Matbldtri writing PFLOTRAN format. PFLOTRAN total CELL nodes = 4 PFLOTRAN will filter zero coefs. PFLOTRAN coefficient from matbld Aij/Xij max = 5.0000000E-01 PFLOTRAN filter = epsilon * abs(max Aij/Xij) : 1.0000000E-12 5.0000000E-01 PFLOTRAN coefficients: epsilon for zero filter = 5.0000000E-13 PFLOTRAN total matbld matrix coefficients = 14 PFLOTRAN matrix i>j (written) = 5 PFLOTRAN matrix i<=j (not written) = 9 PFLOTRAN zero coefs < epsilon (not written) = 1 PFLOTRAN total CONNECTIONS written = 4 PFLOTRAN Warning: ij count differs from num written. PFLOTRAN coefficient Aij min = 5.0000000E-01 PFLOTRAN coefficient Aij max = 5.0000000E-01 *** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL *** 2D Matrix Coefficient file written with name out_tri_1x1m.uge ***************** dump/pflotran/out_tri_1x1m_0/motri/nofilter_zero ***Construct Regular Sparse Matrix:2D*** ------------ Matbldtri Number of Nodes = 4 Max. Connection to a Node = 4 Number of Area Coefficients = 14 Minimum Voronoi area = 2.5000000E-01 Maximum Voronoi area = 2.5000000E-01 Minimum Voronoi edge length = 0.0000000E+00 Maximum Voronoi edge length = 5.0000000E-01 Total Voronoi area = 1.0000000E+00 Total Triangle area = 1.0000000E+00 Matbldtri writing PFLOTRAN format. PFLOTRAN total CELL nodes = 4 PFLOTRAN will not filter zero coefs. PFLOTRAN coefficient from matbld Aij/Xij max = 5.0000000E-01 PFLOTRAN total matbld matrix coefficients = 14 PFLOTRAN matrix i>j (written) = 5 PFLOTRAN matrix i<=j (not written) = 9 PFLOTRAN zero coefs < epsilon (written) = 1 PFLOTRAN total CONNECTIONS written = 5 PFLOTRAN coefficient Aij min = 0.0000000E+00 PFLOTRAN coefficient Aij max = 5.0000000E-01 *** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL *** 2D Matrix Coefficient file written with name out_tri_1x1m_0.uge ***************** * 2 meter width cmo delete motri Released Mesh Object: motri cmo/create/motri///triplane createpts/xyz/2 2 1/0. 0. 0./2. 2. 0./1 1 1 RZ GENERATED POINTS 1 TO 4 cmo/setatt/motri/imt/1 0 0/1 Warning: nelements = 0 4 values reset for attribute imt1 connect Coordinates of enclosing triangle are: -0.35000D+01-0.32000D+01 0.00000D+00 0.55000D+01-0.35000D+01 0.00000D+00 0.10100D+01 0.10000D+02 0.00000D+00 Successfully eliminated all multimaterial connections. The mesh is now complete! LaGriT FINISH: connect recon/0 RECON2D reconnection loop2d: 1 RECON: done. finish LaGriT FINISH: recon 0 for connect 2d rmpoint compress 0 points removed and 0 elements removed. RMPOINT: new point count is 4 RMPOINT: new element count is 2 resetpts/itp geniee finish dump avs tmp_tri_2x2m.inp motri 1 1 0 0 cmo/modatt/-def-/-def-/ioflag/x finish quality epsilonl, epsilonaspect: 6.2803698E-13 2.4771691E-37 -------------------------------------------- elements with aspect ratio < .01: 0 elements with aspect ratio b/w .01 and .02: 0 elements with aspect ratio b/w .02 and .05: 0 elements with aspect ratio b/w .05 and .1 : 0 elements with aspect ratio b/w .1 and .2 : 0 elements with aspect ratio b/w .2 and .5 : 0 elements with aspect ratio b/w .5 and 1. : 2 min aspect ratio = 0.8284E+00 max aspect ratio = 0.8284E+00 epsilonvol: 1.7763568E-12 --------------------------------------- All elements have volume 2.0000000E+00 ----------------------------------------------------------- 2 total elements evaluated. ***************** dump/stor/out_tri_2x2m/motri ***Construct Regular Sparse Matrix:2D*** ------------ Matbldtri Number of Nodes = 4 Max. Connection to a Node = 4 Number of Area Coefficients = 14 Minimum Voronoi area = 1.0000000E+00 Maximum Voronoi area = 1.0000000E+00 Minimum Voronoi edge length = 0.0000000E+00 Maximum Voronoi edge length = 5.0000000E-01 Total Voronoi area = 4.0000000E+00 Total Triangle area = 4.0000000E+00 Matbldtri writing FEHM stor format. *** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL *** 2D Matrix Coefficient file written with name out_tri_2x2m.stor ***************** dump/pflotran/out_tri_2x2m/motri ***Construct Regular Sparse Matrix:2D*** ------------ Matbldtri Number of Nodes = 4 Max. Connection to a Node = 4 Number of Area Coefficients = 14 Minimum Voronoi area = 1.0000000E+00 Maximum Voronoi area = 1.0000000E+00 Minimum Voronoi edge length = 0.0000000E+00 Maximum Voronoi edge length = 5.0000000E-01 Total Voronoi area = 4.0000000E+00 Total Triangle area = 4.0000000E+00 Matbldtri writing PFLOTRAN format. PFLOTRAN total CELL nodes = 4 PFLOTRAN will filter zero coefs. PFLOTRAN coefficient from matbld Aij/Xij max = 5.0000000E-01 PFLOTRAN filter = epsilon * abs(max Aij/Xij) : 1.0000000E-12 5.0000000E-01 PFLOTRAN coefficients: epsilon for zero filter = 5.0000000E-13 PFLOTRAN total matbld matrix coefficients = 14 PFLOTRAN matrix i>j (written) = 5 PFLOTRAN matrix i<=j (not written) = 9 PFLOTRAN zero coefs < epsilon (not written) = 1 PFLOTRAN total CONNECTIONS written = 4 PFLOTRAN Warning: ij count differs from num written. PFLOTRAN coefficient Aij min = 1.0000000E+00 PFLOTRAN coefficient Aij max = 1.0000000E+00 *** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL *** 2D Matrix Coefficient file written with name out_tri_2x2m.uge ***************** dump/pflotran/out_tri_2x2m_0/motri/nofilter_zero ***Construct Regular Sparse Matrix:2D*** ------------ Matbldtri Number of Nodes = 4 Max. Connection to a Node = 4 Number of Area Coefficients = 14 Minimum Voronoi area = 1.0000000E+00 Maximum Voronoi area = 1.0000000E+00 Minimum Voronoi edge length = 0.0000000E+00 Maximum Voronoi edge length = 5.0000000E-01 Total Voronoi area = 4.0000000E+00 Total Triangle area = 4.0000000E+00 Matbldtri writing PFLOTRAN format. PFLOTRAN total CELL nodes = 4 PFLOTRAN will not filter zero coefs. PFLOTRAN coefficient from matbld Aij/Xij max = 5.0000000E-01 PFLOTRAN total matbld matrix coefficients = 14 PFLOTRAN matrix i>j (written) = 5 PFLOTRAN matrix i<=j (not written) = 9 PFLOTRAN zero coefs < epsilon (written) = 1 PFLOTRAN total CONNECTIONS written = 5 PFLOTRAN coefficient Aij min = 0.0000000E+00 PFLOTRAN coefficient Aij max = 1.0000000E+00 *** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL *** 2D Matrix Coefficient file written with name out_tri_2x2m_0.uge ***************** * 3 x 4 nodes cmo delete motri Released Mesh Object: motri cmo/create/motri///triplane createpts/xyz/3 4 1/0. 0. 0./2. 2. 0./1 1 1 RZ GENERATED POINTS 1 TO 12 cmo/setatt/motri/imt/1 0 0/1 Warning: nelements = 0 12 values reset for attribute imt1 connect Coordinates of enclosing triangle are: -0.35000D+01-0.32000D+01 0.00000D+00 0.55000D+01-0.35000D+01 0.00000D+00 0.10100D+01 0.10000D+02 0.00000D+00 Successfully eliminated all multimaterial connections. The mesh is now complete! LaGriT FINISH: connect recon/0 RECON2D reconnection loop2d: 1 RECON: done. finish LaGriT FINISH: recon 0 for connect 2d rmpoint compress 0 points removed and 0 elements removed. RMPOINT: new point count is 12 RMPOINT: new element count is 12 resetpts/itp geniee finish dump avs tmp_tri_3x4_pts.inp motri 1 1 0 0 cmo/modatt/-def-/-def-/ioflag/x finish quality epsilonl, epsilonaspect: 6.2803698E-13 2.4771691E-37 -------------------------------------------- elements with aspect ratio < .01: 0 elements with aspect ratio b/w .01 and .02: 0 elements with aspect ratio b/w .02 and .05: 0 elements with aspect ratio b/w .05 and .1 : 0 elements with aspect ratio b/w .1 and .2 : 0 elements with aspect ratio b/w .2 and .5 : 0 elements with aspect ratio b/w .5 and 1. : 12 min aspect ratio = 0.7735E+00 max aspect ratio = 0.7735E+00 epsilonvol: 1.7763568E-12 --------------------------------------- All elements have volume 3.3333333E-01 ----------------------------------------------------------- 12 total elements evaluated. ***************** dump/stor/out_tri_3x4/motri ***Construct Regular Sparse Matrix:2D*** ------------ Matbldtri Number of Nodes = 12 Max. Connection to a Node = 7 Number of Area Coefficients = 58 Minimum Voronoi area = 1.6666667E-01 Maximum Voronoi area = 6.6666667E-01 Minimum Voronoi edge length = 0.0000000E+00 Maximum Voronoi edge length = 1.5000000E+00 Total Voronoi area = 4.0000000E+00 Total Triangle area = 4.0000000E+00 Matbldtri writing FEHM stor format. *** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL *** 2D Matrix Coefficient file written with name out_tri_3x4.stor ***************** dump/pflotran/out_tri_3x4/motri ***Construct Regular Sparse Matrix:2D*** ------------ Matbldtri Number of Nodes = 12 Max. Connection to a Node = 7 Number of Area Coefficients = 58 Minimum Voronoi area = 1.6666667E-01 Maximum Voronoi area = 6.6666667E-01 Minimum Voronoi edge length = 0.0000000E+00 Maximum Voronoi edge length = 1.5000000E+00 Total Voronoi area = 4.0000000E+00 Total Triangle area = 4.0000000E+00 Matbldtri writing PFLOTRAN format. PFLOTRAN total CELL nodes = 12 PFLOTRAN will filter zero coefs. PFLOTRAN coefficient from matbld Aij/Xij max = 1.5000000E+00 PFLOTRAN filter = epsilon * abs(max Aij/Xij) : 1.0000000E-12 1.5000000E+00 PFLOTRAN coefficients: epsilon for zero filter = 1.5000000E-12 PFLOTRAN total matbld matrix coefficients = 58 PFLOTRAN matrix i>j (written) = 23 PFLOTRAN matrix i<=j (not written) = 35 PFLOTRAN zero coefs < epsilon (not written) = 6 PFLOTRAN total CONNECTIONS written = 17 PFLOTRAN Warning: ij count differs from num written. PFLOTRAN coefficient Aij min = 3.3333333E-01 PFLOTRAN coefficient Aij max = 1.0000000E+00 *** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL *** 2D Matrix Coefficient file written with name out_tri_3x4.uge ***************** dump/pflotran/out_tri_3x4_0/motri/nofilter_zero ***Construct Regular Sparse Matrix:2D*** ------------ Matbldtri Number of Nodes = 12 Max. Connection to a Node = 7 Number of Area Coefficients = 58 Minimum Voronoi area = 1.6666667E-01 Maximum Voronoi area = 6.6666667E-01 Minimum Voronoi edge length = 0.0000000E+00 Maximum Voronoi edge length = 1.5000000E+00 Total Voronoi area = 4.0000000E+00 Total Triangle area = 4.0000000E+00 Matbldtri writing PFLOTRAN format. PFLOTRAN total CELL nodes = 12 PFLOTRAN will not filter zero coefs. PFLOTRAN coefficient from matbld Aij/Xij max = 1.5000000E+00 PFLOTRAN total matbld matrix coefficients = 58 PFLOTRAN matrix i>j (written) = 23 PFLOTRAN matrix i<=j (not written) = 35 PFLOTRAN zero coefs < epsilon (written) = 6 PFLOTRAN total CONNECTIONS written = 23 PFLOTRAN coefficient Aij min = 0.0000000E+00 PFLOTRAN coefficient Aij max = 1.0000000E+00 *** SPARSE COEFFICIENT MATRIX for 2D SUCCESSFUL *** 2D Matrix Coefficient file written with name out_tri_3x4_0.uge ******* 3D **************************************** * NOTE these hex meshes are connected into tets * LaGriT does not write stor files for hex elements * 1 meter width single cmo delete mohex Mesh Object release skipped, it does not exist: mohex cmo/create/mohex createpts/xyz/2 2 2/0. 0. 0./1. 1. 1./1 1 1 RZ GENERATED POINTS 1 TO 8 cmo/setatt/mohex/imt/1 0 0/1 Warning: nelements = 0 8 values reset for attribute imt1 connect Coordinates of enclosing tetrahedron are: -0.20000D+01 -0.75000D+00 -0.75000D+00 0.50000D+00 -0.75000D+00 0.42500D+01 0.30000D+01 -0.75000D+00 -0.75000D+00 0.50000D+00 0.42500D+01 0.50000D+00 Successfully eliminated all multimaterial connections. The mesh is now complete! LaGriT FINISH: connect rmpoint compress 0 points removed and 0 elements removed. RMPOINT: new point count is 8 RMPOINT: new element count is 6 resetpts/itp geniee finish dump avs tmp_hex_1x1m.inp mohex 1 1 0 0 cmo/modatt/-def-/-def-/ioflag/x finish quality epsilonl, epsilonaspect: 3.8459254E-13 5.6885628E-38 -------------------------------------------- elements with aspect ratio < .01: 0 elements with aspect ratio b/w .01 and .02: 0 elements with aspect ratio b/w .02 and .05: 0 elements with aspect ratio b/w .05 and .1 : 0 elements with aspect ratio b/w .1 and .2 : 0 elements with aspect ratio b/w .2 and .5 : 0 elements with aspect ratio b/w .5 and 1. : 6 min aspect ratio = 0.6230E+00 max aspect ratio = 0.7321E+00 epsilonvol: 2.2204460E-13 --------------------------------------- All elements have volume 1.6666667E-01 ----------------------------------------------------------- 6 total elements evaluated. ***************** dump/stor/out_hex_1x1m/mohex *** Construct and Compress Sparse Matrix:3D *** *** Compress Area Coefficient Values *** AMatbld3d_stor: Matrix compress_eps: 0.1000000E-07 AMatbld3d_stor: Local epsilon: 0.1000000E-14 AMatbld3d_stor: *****Zero Negative Coefficients ****** AMatbld3d_stor: Number of 'zero' (< compress_eps) coefs 0 AMatbld3d_stor: npoints = 8 ncoefs = 32 AMatbld3d_stor: Number of unique coefs = 2 AMatbld3d_stor: Maximum num. connections to a node = 4 AMatbld3d_stor: Volume min = 1.2500000E-01 AMatbld3d_stor: Volume max = 1.2500000E-01 AMatbld3d_stor: Total Volume: 1.0000000E+00 AMatbld3d_stor: abs(Aij/xij) min = 0.0000000E+00 AMatbld3d_stor: abs(Aij/xij) max = 2.5000000E-01 AMatbld3d_stor: (Aij/xij) max = 0.0000000E+00 AMatbld3d_stor: (Aij/xij) min = -2.5000000E-01 AMatbld3d_stor Matrix coefficient values stored as scalar area/distance AMatbld3d_stor Matrix compression used for graph and coefficient values ascii STOR file written with name out_hex_1x1m.stor *** SPARSE COEFFICIENT MATRIX _astor SUCCESSFUL *** 3D Matrix Coefficient file written with name out_hex_1x1m.stor ***************** dump/pflotran/out_hex_1x1m/mohex *** Construct and Compress Sparse Matrix:3D *** *** Compress Area Coefficient Values *** AMatbld3d_stor: Matrix compress_eps: 0.1000000E-07 AMatbld3d_stor: Local epsilon: 0.1000000E-14 AMatbld3d_stor: *****Zero Negative Coefficients ****** AMatbld3d_stor: Number of 'zero' (< compress_eps) coefs 0 AMatbld3d_stor: npoints = 8 ncoefs = 32 AMatbld3d_stor: Number of unique coefs = 2 AMatbld3d_stor: Maximum num. connections to a node = 4 PFLOTRAN total CELL nodes = 8 AMatbld3d_stor: Volume min = 1.2500000E-01 AMatbld3d_stor: Volume max = 1.2500000E-01 AMatbld3d_stor: Total Volume: 1.0000000E+00 AMatbld3d_stor: abs(Aij/xij) min = 0.0000000E+00 AMatbld3d_stor: abs(Aij/xij) max = 2.5000000E-01 AMatbld3d_stor: (Aij/xij) max = 0.0000000E+00 AMatbld3d_stor: (Aij/xij) min = -2.5000000E-01 PFLOTRAN will filter zero coefs. PFLOTRAN coefficient from matbld Aij/Xij max = 0.0000000E+00 PFLOTRAN filter = epsilon * abs(max Aij/Xij) : 1.0000000E-12 0.0000000E+00 PFLOTRAN coefficients: epsilon for zero filter = 1.0000000E-12 PFLOTRAN total matbld matrix coefficients = 32 PFLOTRAN matrix i>j (written) = 12 PFLOTRAN matrix i<=j (not written) = 20 PFLOTRAN zero coefs < epsilon (not written) = 0 PFLOTRAN total CONNECTIONS written = 12 PFLOTRAN coefficient Aij min = 2.5000000E-01 PFLOTRAN coefficient Aij max = 2.5000000E-01 AMatbld3d_stor Matrix coefficient values stored as scalar area/distance *** SPARSE COEFFICIENT MATRIX for PFLOTRAN SUCCESSFUL *** 3D Matrix Coefficient file written with name out_hex_1x1m.uge ***************** dump/pflotran/out_hex_1x1m_0/mohex/nofilter_zero *** Construct and Compress Sparse Matrix:3D *** *** Compress Area Coefficient Values *** AMatbld3d_stor: Matrix compress_eps: 0.1000000E-07 AMatbld3d_stor: Local epsilon: 0.1000000E-14 AMatbld3d_stor: *****Zero Negative Coefficients ****** AMatbld3d_stor: Number of 'zero' (< compress_eps) coefs 0 AMatbld3d_stor: npoints = 8 ncoefs = 32 AMatbld3d_stor: Number of unique coefs = 2 AMatbld3d_stor: Maximum num. connections to a node = 4 PFLOTRAN total CELL nodes = 8 AMatbld3d_stor: Volume min = 1.2500000E-01 AMatbld3d_stor: Volume max = 1.2500000E-01 AMatbld3d_stor: Total Volume: 1.0000000E+00 AMatbld3d_stor: abs(Aij/xij) min = 0.0000000E+00 AMatbld3d_stor: abs(Aij/xij) max = 2.5000000E-01 AMatbld3d_stor: (Aij/xij) max = 0.0000000E+00 AMatbld3d_stor: (Aij/xij) min = -2.5000000E-01 PFLOTRAN will not filter zero coefs. PFLOTRAN coefficient from matbld Aij/Xij max = 0.0000000E+00 PFLOTRAN total matbld matrix coefficients = 32 PFLOTRAN matrix i>j (written) = 12 PFLOTRAN matrix i<=j (not written) = 20 PFLOTRAN zero coefs < epsilon (written) = 0 PFLOTRAN total CONNECTIONS written = 12 PFLOTRAN coefficient Aij min = 2.5000000E-01 PFLOTRAN coefficient Aij max = 2.5000000E-01 AMatbld3d_stor Matrix coefficient values stored as scalar area/distance *** SPARSE COEFFICIENT MATRIX for PFLOTRAN SUCCESSFUL *** 3D Matrix Coefficient file written with name out_hex_1x1m_0.uge ***************** **************** * Sample slanted box mesh from Satish for testing * Note differences for voronoi Aij on boundaries * matbld voronoi volumes do not go beyond the mesh boundary * so an edge node can have half a voronoi volume read input_sample_tet.inp motet read/avs/input_sample_tet.inp/motet cmo/addatt/motet/id_in/VINT/scalar/nnodes/linear/permanent/gxaf/0.0 finish geniee finish cmo/status/brief The current-mesh-object(CMO) is: motet 1 Mesh Object name: motri number of nodes = 12 number of elements = 12 dimensions geometry = 2 element type = tri dimensions topology = 2 3 nodes 3 faces 3 edges boundary flag = 16000000 status = inactive 2 Mesh Object name: mohex number of nodes = 8 number of elements = 6 dimensions geometry = 3 element type = tet dimensions topology = 3 4 nodes 4 faces 6 edges boundary flag = 16000000 status = inactive 3 Mesh Object name: motet number of nodes = 60 number of elements = 144 dimensions geometry = 3 element type = tet dimensions topology = 3 4 nodes 4 faces 6 edges boundary flag = 16000000 status = active finish finish ***************** dump/stor/out_sample_tet/motet *** Construct and Compress Sparse Matrix:3D *** *** Compress Area Coefficient Values *** AMatbld3d_stor: Matrix compress_eps: 0.1000000E-07 AMatbld3d_stor: Local epsilon: 0.1000000E-14 AMatbld3d_stor: *****Zero Negative Coefficients ****** AMatbld3d_stor: Number of 'zero' (< compress_eps) coefs 0 AMatbld3d_stor: npoints = 60 ncoefs = 570 AMatbld3d_stor: Number of unique coefs = 163 AMatbld3d_stor: Maximum num. connections to a node = 15 AMatbld3d_stor: Volume min = 1.9214006E+02 AMatbld3d_stor: Volume max = 3.1199559E+03 AMatbld3d_stor: Total Volume: 6.6240000E+04 AMatbld3d_stor: abs(Aij/xij) min = 0.0000000E+00 AMatbld3d_stor: abs(Aij/xij) max = 2.1147826E+01 AMatbld3d_stor: (Aij/xij) max = 0.0000000E+00 AMatbld3d_stor: (Aij/xij) min = -2.1147826E+01 AMatbld3d_stor Matrix coefficient values stored as scalar area/distance AMatbld3d_stor Matrix compression used for graph and coefficient values ascii STOR file written with name out_sample_tet.stor *** SPARSE COEFFICIENT MATRIX _astor SUCCESSFUL *** 3D Matrix Coefficient file written with name out_sample_tet.stor ***************** dump pflotran out_sample_tet motet *** Construct and Compress Sparse Matrix:3D *** *** Compress Area Coefficient Values *** AMatbld3d_stor: Matrix compress_eps: 0.1000000E-07 AMatbld3d_stor: Local epsilon: 0.1000000E-14 AMatbld3d_stor: *****Zero Negative Coefficients ****** AMatbld3d_stor: Number of 'zero' (< compress_eps) coefs 0 AMatbld3d_stor: npoints = 60 ncoefs = 570 AMatbld3d_stor: Number of unique coefs = 163 AMatbld3d_stor: Maximum num. connections to a node = 15 PFLOTRAN total CELL nodes = 60 AMatbld3d_stor: Volume min = 1.9214006E+02 AMatbld3d_stor: Volume max = 3.1199559E+03 AMatbld3d_stor: Total Volume: 6.6240000E+04 AMatbld3d_stor: abs(Aij/xij) min = 0.0000000E+00 AMatbld3d_stor: abs(Aij/xij) max = 2.1147826E+01 AMatbld3d_stor: (Aij/xij) max = 0.0000000E+00 AMatbld3d_stor: (Aij/xij) min = -2.1147826E+01 PFLOTRAN will filter zero coefs. PFLOTRAN coefficient from matbld Aij/Xij max = 0.0000000E+00 PFLOTRAN filter = epsilon * abs(max Aij/Xij) : 1.0000000E-12 0.0000000E+00 PFLOTRAN coefficients: epsilon for zero filter = 1.0000000E-12 PFLOTRAN total matbld matrix coefficients = 570 PFLOTRAN matrix i>j (written) = 255 PFLOTRAN matrix i<=j (not written) = 315 PFLOTRAN zero coefs < epsilon (not written) = 0 PFLOTRAN total CONNECTIONS written = 255 PFLOTRAN coefficient Aij min = 3.2063536E+00 PFLOTRAN coefficient Aij max = 2.2305694E+02 AMatbld3d_stor Matrix coefficient values stored as scalar area/distance *** SPARSE COEFFICIENT MATRIX for PFLOTRAN SUCCESSFUL *** 3D Matrix Coefficient file written with name out_sample_tet.uge ***************** cmo/printatt/motet/-all- minmax ATTRIBUTE NAME MIN MAX DIFFERENCE LENGTH -def- 0.000000000E+00 0.000000000E+00 0.000000000E+00 60 scalar 1 1 0 1 vector 3 3 0 1 nnodes 60 60 0 1 nedges 0 0 0 1 nfaces 0 0 0 1 nelements 144 144 0 1 mbndry 16000000 16000000 0 1 ndimensions_topo 3 3 0 1 ndimensions_geom 3 3 0 1 nodes_per_element 4 4 0 1 edges_per_element 6 6 0 1 faces_per_element 4 4 0 1 isetwd 0 0 0 60 ialias 0 0 0 60 imt1 1 1 0 60 itp1 0 10 10 60 icr1 0 0 0 60 isn1 0 0 0 60 xic 1.000000000E+00 6.000000000E+01 5.900000000E+01 60 yic 5.000000000E+00 5.300000000E+01 4.800000000E+01 60 zic 6.500000000E+00 4.100000000E+01 3.450000000E+01 60 xtetwd 0 0 0 144 itetclr 1 1 0 144 itettyp 5 5 0 144 itetoff 0 572 572 144 jtetoff 0 572 572 144 itet 1 60 59 144x4 jtet 1 16000000 15999999 144x4 epsilon 1.000000004E-15 1.000000004E-15 0.000000000E+00 1 epsilonl 1.854471291E-11 1.854471291E-11 0.000000000E+00 1 epsilona 1.548816631E-09 1.548816631E-09 0.000000000E+00 1 epsilonv 2.169464608E-08 2.169464608E-08 0.000000000E+00 1 ipointi 1 1 0 1 ipointj 60 60 0 1 idebug 0 0 0 1 itypconv_sm 1 1 0 1 maxiter_sm 25 25 0 1 tolconv_sm 1.000000000E+00 1.000000000E+00 0.000000000E+00 1 nnfreq 1 1 0 1 ivoronoi 1 1 0 1 iopt2to2 2 2 0 1 xmin 1.000000000E+00 1.000000000E+00 0.000000000E+00 1 ymin 5.000000000E+00 5.000000000E+00 0.000000000E+00 1 zmin 6.500000000E+00 6.500000000E+00 0.000000000E+00 1 xmax 6.000000000E+01 6.000000000E+01 0.000000000E+00 1 ymax 5.300000000E+01 5.300000000E+01 0.000000000E+00 1 zmax 4.100000000E+01 4.100000000E+01 0.000000000E+00 1 kdtree_level 0 0 0 1 max_number_sets 64 64 0 1 number_of_psets 0 0 0 1 number_of_eltsets 0 0 0 1 number_of_fsets 0 0 0 1 id_in 1 60 59 60 finish LaGriT successfully completed