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v0.4.5 ... main

Author SHA1 Message Date
kojix2
cd638f7ec1
Enable workflow_dispatch for test 2024-12-26 09:02:26 +09:00
kojix2
9aabd4a877 v0.4.6 2024-07-20 15:42:36 +09:00
kojix2
48f4af10c3 Add csv to gemspec
csv  is not part of the default gems since Ruby 3.4.0
2024-07-20 15:36:48 +09:00
kojix2
b0b03053af Add Ruby 3.4 to CI 2024-07-20 15:30:16 +09:00
kojix2
2a8c621be6 Update GitHub Actions versions in ci.yml and doc.yml 2024-07-20 15:29:02 +09:00
kojix2
4c45143edb
Update README.md
Adjust the order of installation commands
2024-06-25 14:01:30 +09:00
Naser Aleisa
ef6794e32f docs: add nix command to installation 2024-06-25 13:58:23 +09:00
kojix2
7cad6753ca Remove Ruby 2.5 from GitHub Actions testing
CRuby < 2.6 does not support macos-arm64
2024-06-09 23:51:22 +09:00
Gabor Szarnyas
9b239cef89 Fix typo: baplot -> barplot 2024-06-09 23:45:48 +09:00
kojix2
6451ab40d4
Update FUNDING.yml 2024-02-10 09:27:42 +09:00
kojix2
575a780321
Added Ruby 3.3 to CI and removed 2.4 2023-12-26 14:42:00 +09:00
muxator
666df42e07
readme: fix typo for "-o" option (#47)
If you want to output to "standard input" -> "standard output"
2023-11-15 19:39:42 +09:00
kojix2
a2d04dafa3
Update README.md
How to install with Anaconda
2023-04-28 06:11:36 +09:00
kojix2
7d595d7ede
Update README.md 2023-04-10 11:08:01 +09:00
kojix2
99bdbb06d1
Add examples that work offline to the README (#42)
Fix #41
Reported by @zhangwenda0518 Thanks!
2023-04-09 16:07:48 +09:00
gemmaro
60f9cb32dd
Added Guix installation (#40)
Guix issue tracker: https://issues.guix.gnu.org/62161
2023-04-06 17:23:15 +09:00
TO226
1a3a80568d Fix a missing link 2023-02-26 11:28:47 +09:00
kojix2
3ee329908b
Update README.md
YouPlot is available via homebrew
Reported by @zachvalenta (#33) Thanks!
2023-02-13 14:35:49 +09:00
7 changed files with 70 additions and 14 deletions

1
.github/FUNDING.yml vendored
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@ -1,2 +1 @@
github: kojix2
ko_fi: kojix2

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@ -1,15 +1,15 @@
name: test
on: [push, pull_request]
on: [push, pull_request, workflow_dispatch]
jobs:
build:
name: ${{ matrix.os }} Ruby ${{ matrix.ruby }}
runs-on: ${{ matrix.os }}-latest
strategy:
matrix:
os: [ 'ubuntu', 'macos' ]
ruby: [ '2.4', '2.5', '2.6', '2.7', '3.0', '3.1', '3.2' ]
os: ["ubuntu", "macos"]
ruby: ["2.6", "2.7", "3.0", "3.1", "3.2", "3.3", "3.4"]
steps:
- uses: actions/checkout@v3
- uses: actions/checkout@v4
- uses: ruby/setup-ruby@v1
with:
ruby-version: ${{ matrix.ruby }}

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@ -10,14 +10,14 @@ jobs:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: actions/checkout@v4
- uses: ruby/setup-ruby@v1
with:
ruby-version: ruby
- name: Generate document
run: gem install -N yard && yard doc
- name: Publish Documentation on GitHub Pages
uses: peaceiris/actions-gh-pages@v3
uses: peaceiris/actions-gh-pages@v4
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_dir: ./doc

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@ -1,7 +1,7 @@
<div align="center">
<img src="logo.svg">
<hr>
<img alt="Build Status" src="https://github.com/red-data-tools/YouPlot/workflows/test/badge.svg">
<a href="https://github.com/red-data-tools/YouPlot/actions/workflows/ci.yml"><img alt="Build Status" src="https://github.com/red-data-tools/YouPlot/workflows/test/badge.svg"></a>
<a href="https://rubygems.org/gems/youplot/"><img alt="Gem Version" src="https://badge.fury.io/rb/youplot.svg"></a>
<a href="https://zenodo.org/badge/latestdoi/283230219"><img alt="DOI" src="https://zenodo.org/badge/283230219.svg"></a>
<a href="https://rubydoc.info/gems/youplot/"><img alt="Docs Stable" src="https://img.shields.io/badge/docs-stable-blue.svg"></a>
@ -15,6 +15,24 @@
## Installation
```
brew install youplot
```
```
gem install youplot
```
```
nix shell nixpkgs#youplot
```
```
guix install youplot
```
```
conda install -c conda-forge ruby
conda install -c conda-forge compilers
gem install youplot
```
@ -37,13 +55,20 @@ curl -sL https://git.io/ISLANDScsv \
<img alt="barplot" src="https://user-images.githubusercontent.com/5798442/101999903-d36a2d00-3d24-11eb-9361-b89116f44122.png">
</p>
```sh
# For offline user: Sorts files in a directory by size and shows a bar graph.
ls -l | awk '{print $9, $5}' | sort -nk 2 | uplot bar -d ' '
```
### histogram
```sh
echo -e "from numpy import random;" \
"n = random.randn(10000);" \
"print('\\\n'.join(str(i) for i in n))" \
| python \
| python3 \
| uplot hist --nbins 20
```
@ -63,6 +88,14 @@ curl -sL https://git.io/AirPassengers \
<img alt="lineplot" src="https://user-images.githubusercontent.com/5798442/101999825-24c5ec80-3d24-11eb-99f4-c642e8d221bc.png">
</p>
```sh
# For offline users: Calculates sin values (0-2*pi) and plots a sine wave.
python3 -c '
from math import sin, pi
data = "\n".join(f"{i*pi/50}\t{sin(i*pi/50)}" for i in range(101))
print(data)' | uplot line
```
### scatter
```sh
@ -75,6 +108,12 @@ curl -sL https://git.io/IRIStsv \
<img alt="scatter" src="https://user-images.githubusercontent.com/5798442/101999827-27284680-3d24-11eb-9903-551857eaa69c.png">
</p>
```sh
# For offline users
cat test/fixtures/iris.csv | cut -f1-4 -d, | uplot scatter -H -d, -t IRIS
```
### density
```sh
@ -87,6 +126,11 @@ curl -sL https://git.io/IRIStsv \
<img alt="density" src="https://user-images.githubusercontent.com/5798442/101999828-2abbcd80-3d24-11eb-902c-2f44266fa6ae.png">
</p>
```sh
# For offline users
cat test/fixtures/iris.csv | cut -f1-4 -d, | uplot density -H -d, -t IRIS
```
### boxplot
```sh
@ -99,8 +143,21 @@ curl -sL https://git.io/IRIStsv \
<img alt="boxplot" src="https://user-images.githubusercontent.com/5798442/101999830-2e4f5480-3d24-11eb-8891-728c18bf5b35.png">
</p>
```sh
# For offline users
cat test/fixtures/iris.csv | cut -f1-4 -d, | uplot boxplot -H -d, -t IRIS
```
### count
Count processes by user ID.
```sh
ps aux | awk '{print $1}' | uplot count
```
Count the number of chromosomes where genes are located.
```sh
cat gencode.v35.annotation.gff3 \
| grep -v '#' | grep 'gene' | cut -f1 \
@ -111,7 +168,6 @@ cat gencode.v35.annotation.gff3 \
<img alt="count" src="https://user-images.githubusercontent.com/5798442/101999832-30b1ae80-3d24-11eb-96fe-e5000bed1f5c.png">
</p>
In this example, YouPlot counts the number of chromosomes where genes are located.
* [GENCODE - Human Release](https://www.gencodegenes.org/human/)
Note: `count` is not very fast because it runs in a Ruby script.
@ -157,7 +213,7 @@ The following sub-commands are available.
* `-o`
* By default, the plot is output to **standard error output**.
* If you want to output to standard input, Use hyphen ` -o -` or no argument `uplot s -o | `.
* If you want to output to standard output, Use hyphen ` -o -` or no argument `uplot s -o | `.
### Output the input data

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@ -189,7 +189,7 @@ module YouPlot
scatter s draw a scatter plot
density d draw a density plot
boxplot box draw a horizontal boxplot
count c draw a baplot based on the number of
count c draw a barplot based on the number of
occurrences (slow)
colors color show the list of available colors

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@ -1,5 +1,5 @@
# frozen_string_literal: true
module YouPlot
VERSION = '0.4.5'
VERSION = '0.4.6'
end

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@ -12,12 +12,13 @@ Gem::Specification.new do |spec|
spec.description = 'A command line tool for Unicode Plotting'
spec.homepage = 'https://github.com/red-data-tools/YouPlot'
spec.license = 'MIT'
spec.required_ruby_version = Gem::Requirement.new('>= 2.4.0')
spec.required_ruby_version = Gem::Requirement.new('>= 2.5.0')
spec.files = Dir['*.{md,txt}', '{lib,exe}/**/*']
spec.bindir = 'exe'
spec.executables = %w[uplot youplot]
spec.require_paths = ['lib']
spec.add_dependency 'csv'
spec.add_dependency 'unicode_plot', '>= 0.0.5'
end