add profile support
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16
job.sh
16
job.sh
@ -1,10 +1,15 @@
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#!/bin/bash
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#!/bin/bash
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# tet-file needs both .node and .ele files generated by Tetgen. No file extension is needed
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# tet-file needs both .node and .ele files generated by Tetgen. No file extension is needed
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# mag-file: magnetization vectors. format1: <filename> format2: (<magz-x>,<magz-y>,<magz-z>)
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# mag-file: magnetization vectors.
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# mag-file: line format: <magz-x> <magz-y> <magz-z>
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# mag-file format:
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# site-file format: 1. <filename> 2. <xmin>/<xmax>/<ymin>/<ymax>/<z>/<xnum>/<ynum>
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# 1. <filename>. Line format: <magz-x> <magz-y> <magz-z>
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# site-file line format: <x> <y> <z>
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# 2: (<magz-x>,<magz-y>,<magz-z>)
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# site-file: observation positions.
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# site-file format:
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# 1. <filename>. Line format: <x> <y> <z>
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# 2. <xmin>/<xmax>/<ymin>/<ymax>/<z>/<xnum>/<ynum>
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# 3. (<x1>,<y1>,<z1>)/(<x2>,<y2>,<z2>)/<num>
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# obs-file needs only the output file's name with no file extension
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# obs-file needs only the output file's name with no file extension
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# available calculating types: potential, gradient and tensor
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# available calculating types: potential, gradient and tensor
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@ -19,7 +24,8 @@ echo "======================"
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cat <<- EOF > ${logfile}
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cat <<- EOF > ${logfile}
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tet-file = data/prism/prism.1
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tet-file = data/prism/prism.1
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mag-file = (0,0,200)
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mag-file = (0,0,200)
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site-file = -30/30/-30/30/10/81/81
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#site-file = -30/30/-30/30/10/81/81
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site-file = (-30,-30,10)/(30,30,10)/51
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obs-file = data/prism/prism
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obs-file = data/prism/prism
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cal-type = potential gradient tensor
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cal-type = potential gradient tensor
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EOF
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EOF
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3
log.txt
3
log.txt
@ -1,5 +1,6 @@
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tet-file = data/prism/prism.1
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tet-file = data/prism/prism.1
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mag-file = (0,0,200)
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mag-file = (0,0,200)
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site-file = -30/30/-30/30/10/81/81
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#site-file = -30/30/-30/30/10/81/81
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site-file = (-30,-30,10)/(30,30,10)/51
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obs-file = data/prism/prism
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obs-file = data/prism/prism
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cal-type = potential gradient tensor
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cal-type = potential gradient tensor
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@ -55,6 +55,20 @@ void magtet::init_site(std::string para)
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return;
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return;
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}
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}
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// try to use the para inthe format (<x1>,<y1>,<z1>)/(<x2>,<y2>,<z2>)/<num>
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std::string p1_str, p2_str;
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gctl::point3dc p1, p2;
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int pnum;
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if (-1 != gctl::parse_string_to_value(para, '/', p1_str, p2_str, pnum))
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{
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p1.str(p1_str);
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p2.str(p2_str);
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gctl::linespace(p1, p2, pnum, site_);
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site_num_ = site_.size();
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return;
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}
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// try to use the para in the format <xmin>/<xmax>/<ymin>/<ymax>/<z>/<xsize>/<ysize>
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// try to use the para in the format <xmin>/<xmax>/<ymin>/<ymax>/<z>/<xsize>/<ysize>
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double xmin, xmax, ymin, ymax, z;
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double xmin, xmax, ymin, ymax, z;
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int xsize, ysize;
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int xsize, ysize;
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@ -501,18 +515,18 @@ int main(int argc, char const *argv[])
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{
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{
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if (argc == 1)
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if (argc == 1)
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{
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{
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std::clog << "Magnetic gradient tensors of homologous tetrahedrons.\n";
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std::cout << "tet-file needs both .node and .ele files generated by Tetgen. No file extension is needed\n";
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std::clog << "Usage: ./magtet <para-file>\n";
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std::cout << "mag-file: magnetization vectors.\n";
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std::clog << "Option format:\n";
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std::cout << "mag-file format:\n";
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std::clog << "<option> = <value>\n";
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std::cout << "1. <filename>. Line format: <magz-x> <magz-y> <magz-z>\n";
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std::clog << "Available options:\n";
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std::cout << "2: (<magz-x>,<magz-y>,<magz-z>)\n";
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std::clog << "tet-file: 3D model file. this option needs both .node and .ele files generated by Tetgen. No file extension is needed\n";
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std::cout << "site-file: observation positions.\n";
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std::clog << "mag-file: magnetization vectors. format1: <filename> format2: (<magz-x>,<magz-y>,<magz-z>)\n";
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std::cout << "site-file format:\n";
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std::clog << "mag-file: line format: <magz-x> <magz-y> <magz-z>\n";
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std::cout << "1. <filename>. Line format: <x> <y> <z>\n";
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std::clog << "site-file: observation points. format1: <filename> format2: <xmin>/<xmax>/<ymin>/<ymax>/<z>/<xnum>/<ynum>\n";
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std::cout << "2. <xmin>/<xmax>/<ymin>/<ymax>/<z>/<xnum>/<ynum>\n";
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std::clog << "site-file: line format: <x> <y> <z>\n";
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std::cout << "3. (<x1>,<y1>,<z1>)/(<x2>,<y2>,<z2>)/<num>\n";
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std::clog << "obs-file: output observation files. No file extension is needed\n";
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std::cout << "obs-file needs only the output file's name with no file extension\n";
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std::clog << "cal-type: available calculating types: potential, gradient and tensor\n";
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std::cout << "available calculating types: potential, gradient and tensor\n";
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return -1;
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return -1;
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}
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}
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