# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)


from spack import *


class Seqan(CMakePackage):
    """SeqAn is an open source C++ library of efficient algorithms and data
    structures for the analysis of sequences with the focus on biological data.
    Our library applies a unique generic design that guarantees high
    performance, generality, extensibility, and integration with other
    libraries. SeqAn is easy to use and simplifies the development of new
    software tools with a minimal loss of performance"""

    homepage = "https://www.seqan.de"
    url      = "https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz"

    version('2.4.0', 'd899821e295fed0a22e08099f40cbc17')

    depends_on('cmake@3.4.0:', type='build')
    depends_on('python@2.7.0:', type='build')
    depends_on('py-nose', type='build')
    depends_on('py-sphinx', type='build')
    depends_on('boost', type=('build', 'link'))
    depends_on('zlib', type=('build', 'link'))
    depends_on('bzip2', type=('build', 'link'))

    conflicts('%intel@:16.0.4')
    conflicts('%gcc@:4.9.4')
    conflicts('%llvm@:3.5.1')
