spack/var/spack/repos/builtin/packages/r-nmf/package.py

##############################################################################
# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *


class RNmf(RPackage):
    """Provides a framework to perform Non-negative Matrix Factorization (NMF).
    The package implements a set of already published algorithms and seeding
    methods, and provides a framework to test, develop and plug new/custom
    algorithms. Most of the built-in algorithms have been optimized in C++, and
    the main interface function provides an easy way of performing parallel
    computations on multicore machines.."""

    homepage = "http://renozao.github.io/NMF"
    url      = "https://cran.r-project.org/src/contrib/NMF_0.20.6.tar.gz"
    list_url = "https://cran.r-project.org/src/contrib/Archive/NMF"

    version('0.20.6', '81df07b3bf710a611db5af24730ff3d0')

    depends_on('r-pkgmaker', type=('build', 'run'))
    depends_on('r-registry', type=('build', 'run'))
    depends_on('r-rngtools', type=('build', 'run'))
    depends_on('r-cluster', type=('build', 'run'))
    depends_on('r-stringr', type=('build', 'run'))
    depends_on('r-digest', type=('build', 'run'))
    depends_on('r-gridbase', type=('build', 'run'))
    depends_on('r-colorspace', type=('build', 'run'))
    depends_on('r-rcolorbrewer', type=('build', 'run'))
    depends_on('r-foreach', type=('build', 'run'))
    depends_on('r-doparallel', type=('build', 'run'))
    depends_on('r-ggplot2', type=('build', 'run'))
    depends_on('r-reshape2', type=('build', 'run'))