2019-12-31 14:36:56 +08:00
|
|
|
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
|
2018-10-08 04:52:23 +08:00
|
|
|
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
2017-08-23 02:48:23 +08:00
|
|
|
#
|
2018-10-08 04:52:23 +08:00
|
|
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
|
|
|
|
|
2017-08-23 02:48:23 +08:00
|
|
|
from spack import *
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
class Probconsrna(Package):
|
|
|
|
|
"""Experimental version of PROBCONS with parameters estimated via
|
|
|
|
|
unsupervised training on BRAliBASE """
|
|
|
|
|
|
|
|
|
|
homepage = "http://probcons.stanford.edu/"
|
|
|
|
|
url = "http://probcons.stanford.edu/probconsRNA.tar.gz"
|
|
|
|
|
|
2019-10-11 13:44:41 +08:00
|
|
|
version('2005-6-7', sha256='7fe4494bd423db1d5f33f5ece2c70f9f66a0d9112e28d3eaa7dfdfe7fa66eba8')
|
2017-08-23 02:48:23 +08:00
|
|
|
|
|
|
|
|
def install(self, build, prefix):
|
|
|
|
|
mkdirp(prefix.bin)
|
|
|
|
|
install('compare', prefix.bin)
|
|
|
|
|
install('makegnuplot', prefix.bin)
|
|
|
|
|
install('probcons', prefix.bin)
|
|
|
|
|
# needed for tcoffee
|
|
|
|
|
install('probcons', prefix.bin.probconsRNA)
|
|
|
|
|
install('project', prefix.bin)
|
