spack/var/spack/repos/builtin/packages/r-affycomp/package.py

# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack import *


class RAffycomp(RPackage):
    """The package contains functions that can be used to compare
    expression measures for Affymetrix Oligonucleotide Arrays."""

    homepage = "https://www.bioconductor.org/packages/affycomp/"
    git      = "https://git.bioconductor.org/packages/affycomp.git"

    version('1.52.0', commit='1b97a1cb21ec93bf1e5c88d5d55b988059612790')

    depends_on('r@3.4.0:3.4.9', when='@1.52.0')
    depends_on('r-biobase', type=('build', 'run'))
copyright: update license headers for 2013-2019 copyright. 2019-01-01 14:04:23 +08:00			`# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other`
relicense: replace LGPL headers with Apache-2.0/MIT SPDX headers - remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only 2018-10-08 04:52:23 +08:00			`# Spack Project Developers. See the top-level COPYRIGHT file for details.`
r-affycomp: Create new package. (#5642) 2017-10-07 10:13:57 +08:00			`#`
relicense: replace LGPL headers with Apache-2.0/MIT SPDX headers - remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only 2018-10-08 04:52:23 +08:00			`# SPDX-License-Identifier: (Apache-2.0 OR MIT)`

r-affycomp: Create new package. (#5642) 2017-10-07 10:13:57 +08:00			`from spack import *`


			`class RAffycomp(RPackage):`
			`"""The package contains functions that can be used to compare`
			`expression measures for Affymetrix Oligonucleotide Arrays."""`

			`homepage = "https://www.bioconductor.org/packages/affycomp/"`
Add top-level attributes for git R (Bioconductor) packages 2018-07-24 10:56:48 +08:00			`git = "https://git.bioconductor.org/packages/affycomp.git"`
r-affycomp: Create new package. (#5642) 2017-10-07 10:13:57 +08:00
Add top-level attributes for git R (Bioconductor) packages 2018-07-24 10:56:48 +08:00			`version('1.52.0', commit='1b97a1cb21ec93bf1e5c88d5d55b988059612790')`
r-affycomp: Create new package. (#5642) 2017-10-07 10:13:57 +08:00
bioconductor update (#5786) * r-a4: Add r dependency and update url. * r-a4base: Add r dependency and update url. * r-a4classif: update url and add r dependency. * r-a4core: Update url and add r dependency. * r-a4preproc: Update url and add r dependency. * r-a4reporting: Update url and add r dependency. * r-abaenrichment: Update url and add r dependency. * r-absseq: Update url and add r dependency. * r-acgh: Update url and add r dependency. * r-acme: Update url and add r dependency. * r-adsplit: Update url and add r dependency. * r-affxparser: Update url and add r dependency. * r-affycomp: Update url and add r dependency. * r-affycompatible: Update url and add r dependency. * r-affycontam: Update url and add r dependency. * r-annaffy: Update url and add r dependency. * r-annotate: Update url and add r dependency. * r-annotate: Update url and add r dependency. * r-annotationdbi: Update url and add r dependency. * r-genefilter: Update url and add r dependency. * r-mlinterfaces: Update url and add r dependency. * r-limma: Update url and add r dependency. * r-multtest: Update url and add r dependency. * r-a4classif: Correct format. * r-affycomp: Correct error. 2017-10-24 17:19:19 +08:00			`depends_on('r@3.4.0:3.4.9', when='@1.52.0')`
r-affycomp: Create new package. (#5642) 2017-10-07 10:13:57 +08:00			`depends_on('r-biobase', type=('build', 'run'))`