2019-01-01 14:04:23 +08:00
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# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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2018-10-08 04:52:23 +08:00
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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2017-06-29 03:14:12 +08:00
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#
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2018-10-08 04:52:23 +08:00
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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2017-06-29 03:14:12 +08:00
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from spack import *
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class AllpathsLg(AutotoolsPackage):
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"""ALLPATHS-LG is our original short read assembler and it works on both
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small and large (mammalian size) genomes."""
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homepage = "http://www.broadinstitute.org/software/allpaths-lg/blog/"
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url = "ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/LATEST_VERSION.tar.gz"
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version('52488', 'bde9008e236d87708a48eb83af6d6d5b')
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# compiles with gcc 4.7.0 to 4.9.4)
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conflicts('%gcc@:4.6.4,5.1.0:')
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conflicts('%cce')
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conflicts('%clang')
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conflicts('%intel')
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conflicts('%nag')
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conflicts('%pgi')
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conflicts('%xl')
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conflicts('%xl_r')
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