26 lines
1010 B
Python
26 lines
1010 B
Python
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# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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import os
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class PhrapCrossmatchSwat(MakefilePackage):
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"""phrap is a program for assembling shotgun DNA sequence data.
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cross_match is a general purpose utility for comparing any two DNA
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sequence sets using a 'banded' version of swat.
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swat is a program for searching one or more DNA or protein query
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sequences, or a query profile, against a sequence database"""
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homepage = "http://www.phrap.org/phredphrapconsed.html"
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url = "file://{0}/phrap-crossmatch-swat-1.090518.tar.gz".format(os.getcwd())
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version('1.090518', sha256='81f50c4410e8604cdefcc34ef6dc7b037be3bb45b94c439611a5590c1cf83665')
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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for b in ['phrap', 'cross_match', 'swat']:
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install(b, prefix.bin)
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