spack/var/spack/repos/builtin/packages/glimmer/package.py

# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack import *


class Glimmer(MakefilePackage):
    """Glimmer is a system for finding genes in microbial DNA, especially the
    genomes of bacteria, archaea, and viruses."""

    homepage = "https://ccb.jhu.edu/software/glimmer"

    version('3.02b', sha256='ecf28e03d0a675aed7360ca34ca7f19993f5c3ea889273e657ced9fa7d1e2bf6')

    build_directory = 'src'

    def url_for_version(self, version):
        url = "https://ccb.jhu.edu/software/glimmer/glimmer{0}.tar.gz"
        return url.format(version.joined)

    def install(self, spec, prefix):
        install_tree('bin', prefix.bin)
copyrights: update all files with license headers for 2021 - [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files - [x] update all licensed files to say 2013-2021 using `spack license update-copyright-year` - [x] appease mypy with some additions to package.py that needed for oneapi.py 2021-01-02 15:10:28 +08:00			`# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other`
relicense: replace LGPL headers with Apache-2.0/MIT SPDX headers - remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only 2018-10-08 04:52:23 +08:00			`# Spack Project Developers. See the top-level COPYRIGHT file for details.`
glimmer: Create new package (#7208) 2018-02-12 05:22:34 +08:00			`#`
relicense: replace LGPL headers with Apache-2.0/MIT SPDX headers - remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only 2018-10-08 04:52:23 +08:00			`# SPDX-License-Identifier: (Apache-2.0 OR MIT)`

glimmer: Create new package (#7208) 2018-02-12 05:22:34 +08:00			`from spack import *`


			`class Glimmer(MakefilePackage):`
			`"""Glimmer is a system for finding genes in microbial DNA, especially the`
			`genomes of bacteria, archaea, and viruses."""`

			`homepage = "https://ccb.jhu.edu/software/glimmer"`

checksums: use sha256 checksums everywhere We'd like to use a consistent checksum scheme everywhere so that we can: a) incorporate archive checksums into our specs and have a consistent hashing algorithm across all specs. b) index mirrors with a consistent type of checksum, and not one that is dependent on how spack packages are written. - [x] convert existing md5, sha224, sha512, sha1 checksums to sha256 2019-10-11 13:44:41 +08:00			`version('3.02b', sha256='ecf28e03d0a675aed7360ca34ca7f19993f5c3ea889273e657ced9fa7d1e2bf6')`
glimmer: Create new package (#7208) 2018-02-12 05:22:34 +08:00
			`build_directory = 'src'`

			`def url_for_version(self, version):`
			`url = "https://ccb.jhu.edu/software/glimmer/glimmer{0}.tar.gz"`
			`return url.format(version.joined)`

			`def install(self, spec, prefix):`
			`install_tree('bin', prefix.bin)`