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r-bsgenome: package update (#7792)

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This commit is contained in:
Matteo Guglielmi
2018-04-17 19:54:04 +02:00
committed by Adam J. Stewart
parent 7171f31425
commit 025e608fd5
1 changed files with 12 additions and 8 deletions
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var/spack/repos/builtin/packages/r-bsgenome/package.py
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@@ -33,15 +33,19 @@ class RBsgenome(RPackage):
url = "https://git.bioconductor.org/packages/BSgenome" url = "https://git.bioconductor.org/packages/BSgenome"
list_url = homepage list_url = homepage
version('1.46.0', git='https://git.bioconductor.org/packages/BSgenome', commit='bdfbd6d09820993585b8231ddea5e11c99008dc5')
version('1.44.2', git='https://git.bioconductor.org/packages/BSgenome', commit='105b00588a758d5ec7c347a7dff2756aea4516a0') version('1.44.2', git='https://git.bioconductor.org/packages/BSgenome', commit='105b00588a758d5ec7c347a7dff2756aea4516a0')
depends_on('r-biocgenerics', type=('build', 'run')) depends_on('r-biocgenerics@0.13.8:', type=('build', 'run'))
depends_on('r-s4vectors', type=('build', 'run')) depends_on('r-s4vectors@0.9.36:', type=('build', 'run'))
depends_on('r-iranges', type=('build', 'run')) depends_on('r-iranges@2.1.33:', type=('build', 'run'), when='@1.44.2')
depends_on('r-genomeinfodb', type=('build', 'run')) depends_on('r-iranges@2.11.16:', type=('build', 'run'), when='@1.46.0')
depends_on('r-genomicranges', type=('build', 'run')) depends_on('r-genomeinfodb@1.11.4:', type=('build', 'run'), when='@1.44.2')
depends_on('r-biostrings', type=('build', 'run')) depends_on('r-genomeinfodb@1.13.1:', type=('build', 'run'), when='@1.46.0')
depends_on('r-rtracklayer', type=('build', 'run')) depends_on('r-genomicranges@1.27.6:', type=('build', 'run'), when='@1.44.2')
depends_on('r-genomicranges@1.29.14:', type=('build', 'run'), when='@1.46.0')
depends_on('r-biostrings@2.35.3:', type=('build', 'run'))
depends_on('r-rtracklayer@1.25.8:', type=('build', 'run'))
depends_on('r-rsamtools', type=('build', 'run')) depends_on('r-rsamtools', type=('build', 'run'))
depends_on('r-xvector', type=('build', 'run')) depends_on('r-xvector', type=('build', 'run'))
depends_on('r@3.4.0:3.4.9', when='@1.44.2') depends_on('r@3.4.0:3.4.9', when='@1.44.2:')