Update the MRNet package with the latest source and patch related to the krell tools needs. Also, reorder the list of version to match with the spack standard: newest to oldest.
This commit is contained in:
Jim Galarowicz
154
var/spack/repos/builtin/packages/mrnet/krell-5.0.1.patch
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154
var/spack/repos/builtin/packages/mrnet/krell-5.0.1.patch
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@@ -0,0 +1,154 @@
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--- mrnet-3093918/include/mrnet/Types.h 2015-12-10 09:32:24.000000000 -0800
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+++ mrnet_top_of_tree/include/mrnet/Types.h 2016-03-16 12:29:33.986132302 -0700
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@@ -23,7 +23,7 @@
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#ifndef MRNET_VERSION_MAJOR
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# define MRNET_VERSION_MAJOR 5
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# define MRNET_VERSION_MINOR 0
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-# define MRNET_VERSION_REV 0
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+# define MRNET_VERSION_REV 1
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#endif
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namespace MRN
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--- mrnet-3093918/include/mrnet_lightweight/Types.h 2015-12-10 09:32:24.000000000 -0800
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+++ mrnet_top_of_tree/include/mrnet_lightweight/Types.h 2016-03-16 12:29:33.987132302 -0700
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@@ -30,7 +30,7 @@
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#ifndef MRNET_VERSION_MAJOR
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#define MRNET_VERSION_MAJOR 5
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#define MRNET_VERSION_MINOR 0
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-#define MRNET_VERSION_REV 0
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+#define MRNET_VERSION_REV 1
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#endif
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void get_Version(int* major,
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int* minor,
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--- mrnet-3093918/src/lightweight/SerialGraph.c 2015-12-10 09:32:24.000000000 -0800
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+++ mrnet_top_of_tree/src/lightweight/SerialGraph.c 2016-03-16 12:29:33.995132302 -0700
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@@ -59,7 +59,7 @@
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mrn_dbg_func_begin();
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- sprintf(hoststr, "[%s:%hu:%u:", ihostname, iport, irank);
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+ sprintf(hoststr, "[%s:%05hu:%u:", ihostname, iport, irank);
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mrn_dbg(5, mrn_printf(FLF, stderr, "looking for SubTreeRoot: '%s'\n", hoststr));
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byte_array = sg->byte_array;
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@@ -110,7 +110,7 @@
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mrn_dbg_func_begin();
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- len = (size_t) sprintf(hoststr, "[%s:%hu:%u:0]", ihostname, iport, irank);
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+ len = (size_t) sprintf(hoststr, "[%s:%05hu:%u:0]", ihostname, iport, irank);
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mrn_dbg(5, mrn_printf(FLF, stderr, "adding sub tree leaf: %s\n", hoststr));
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len += strlen(sg->byte_array) + 1;
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@@ -139,7 +139,7 @@
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mrn_dbg_func_begin();
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- len = (size_t) sprintf(hoststr, "[%s:%hu:%u:1", ihostname, iport, irank);
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+ len = (size_t) sprintf(hoststr, "[%s:%05hu:%u:1", ihostname, iport, irank);
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mrn_dbg(5, mrn_printf(FLF, stderr, "adding sub tree root: %s\n", hoststr));
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len += strlen(sg->byte_array) + 1;
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@@ -360,8 +360,8 @@
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char old_hoststr[256];
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char new_hoststr[256];
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- sprintf(old_hoststr, "[%s:%hu:%u:", hostname, UnknownPort, irank);
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- sprintf(new_hoststr, "[%s:%hu:%u:", hostname, port, irank);
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+ sprintf(old_hoststr, "[%s:%05hu:%u:", hostname, UnknownPort, irank);
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+ sprintf(new_hoststr, "[%s:%05hu:%u:", hostname, port, irank);
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old_byte_array = sg->byte_array;
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new_byte_array = (char*) malloc( strlen(old_byte_array) + 10 );
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--- mrnet-3093918/xplat/src/lightweight/SocketUtils.c 2015-12-10 09:32:24.000000000 -0800
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+++ mrnet_top_of_tree/xplat/src/lightweight/SocketUtils.c 2016-03-16 12:29:34.006132303 -0700
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@@ -15,7 +15,7 @@
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#else
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const XPlat_Socket InvalidSocket = INVALID_SOCKET;
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#endif
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-const XPlat_Port InvalidPort = (XPlat_Port)-1;
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+const XPlat_Port InvalidPort = (XPlat_Port)0;
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static bool_t SetTcpNoDelay( XPlat_Socket sock )
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{
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--- mrnet-3093918/conf/configure.in 2015-12-10 09:32:24.000000000 -0800
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+++ mrnet_top_of_tree/conf/configure.in 2016-03-16 12:45:54.573196781 -0700
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@@ -107,6 +107,18 @@
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AC_SUBST(PURIFY)
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+AC_ARG_WITH(expat,
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+ [AS_HELP_STRING([--with-expat=PATH],
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+ [Absolute path to installation of EXPAT libraries (note: specify the path to the directory containing "include" and "lib" sub-directories)])],
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+ [EXPAT_DIR="${withval}"],
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+ [EXPAT_DIR=""])
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+
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+if test "x$EXPAT_DIR" = "x" ; then
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+ EXPAT_LIB=""
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+else
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+ EXPAT_LIB="-L$EXPAT_DIR/lib"
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+fi
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+
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dnl === Checks for header files.
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AC_CHECK_HEADERS([assert.h errno.h fcntl.h limits.h netdb.h signal.h stddef.h stdlib.h stdio.h string.h unistd.h arpa/inet.h netinet/in.h sys/ioctl.h sys/socket.h sys/sockio.h sys/time.h])
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AC_HEADER_STDBOOL
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@@ -432,7 +444,7 @@
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CRAYXT_ATH_LIBS_SO="$CRAYXT_ATH_LIBS -lalps"
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CRAYXT_ATH_LIBS="$CRAYXT_ATH_LIBS -Wl,-Bstatic -lalps -lxmlrpc -Wl,-Bdynamic"
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CRAYXE_ATH_LIBS_SO="$CRAYXE_ATH_LIBS -lalps"
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- CRAYXE_ATH_LIBS="$CRAYXE_ATH_LIBS -Wl,-Bstatic -lalps -lxmlrpc-epi -lexpat -Wl,-Bdynamic"
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+ CRAYXE_ATH_LIBS="$CRAYXE_ATH_LIBS -Wl,-Bstatic -lalps -lxmlrpc-epi $EXPAT_LIB -lexpat -Wl,-Bdynamic"
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AC_CHECK_LIB( [alps], [alps_launch_tool_helper],
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[HAVE_ATH_LIBS="yes"; EXTRA_LIBS="$CRAYXT_ATH_LIBS $EXTRA_LIBS"; EXTRA_LIBS_SO="$CRAYXT_ATH_LIBS_SO $EXTRA_LIBS_SO"],
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--- mrnet-3093918/configure 2015-12-10 09:32:24.000000000 -0800
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+++ mrnet_top_of_tree/configure 2016-03-16 13:47:20.386439143 -0700
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@@ -742,6 +742,7 @@
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enable_debug
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enable_ltwt_threadsafe
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with_purify
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+with_expat
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'
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ac_precious_vars='build_alias
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host_alias
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@@ -1399,6 +1400,9 @@
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containing "include" and "lib" sub-directories)
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--with-launchmon=PATH Absolute path to installation of LaunchMON
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--with-purify Use purify for memory debugging
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+ --with-expat=PATH Absolute path to installation of EXPAT libraries
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+ (note: specify the path to the directory containing
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+ "include" and "lib" sub-directories)
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Some influential environment variables:
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CC C compiler command
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@@ -3541,6 +3545,21 @@
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+# Check whether --with-expat was given.
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+if test "${with_expat+set}" = set; then :
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+ withval=$with_expat; EXPAT_DIR="${withval}"
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+else
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+ EXPAT_DIR=""
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+fi
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+
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+
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+if test "x$EXPAT_DIR" = "x" ; then
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+ EXPAT_LIB=""
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+else
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+ EXPAT_LIB="-L$EXPAT_DIR/lib"
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+fi
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+
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+
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ac_ext=cpp
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ac_cpp='$CXXCPP $CPPFLAGS'
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ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
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@@ -5473,7 +5492,7 @@
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CRAYXT_ATH_LIBS_SO="$CRAYXT_ATH_LIBS -lalps"
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CRAYXT_ATH_LIBS="$CRAYXT_ATH_LIBS -Wl,-Bstatic -lalps -lxmlrpc -Wl,-Bdynamic"
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CRAYXE_ATH_LIBS_SO="$CRAYXE_ATH_LIBS -lalps"
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- CRAYXE_ATH_LIBS="$CRAYXE_ATH_LIBS -Wl,-Bstatic -lalps -lxmlrpc-epi -lexpat -Wl,-Bdynamic"
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+ CRAYXE_ATH_LIBS="$CRAYXE_ATH_LIBS -Wl,-Bstatic -lalps -lxmlrpc-epi $EXPAT_LIB -lexpat -Wl,-Bdynamic"
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{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for alps_launch_tool_helper in -lalps" >&5
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$as_echo_n "checking for alps_launch_tool_helper in -lalps... " >&6; }
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@@ -3,16 +3,25 @@
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class Mrnet(Package):
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"""The MRNet Multi-Cast Reduction Network."""
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homepage = "http://paradyn.org/mrnet"
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url = "ftp://ftp.cs.wisc.edu/paradyn/mrnet/mrnet_4.0.0.tar.gz"
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url = "ftp://ftp.cs.wisc.edu/paradyn/mrnet/mrnet_5.0.1.tar.gz"
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list_url = "http://ftp.cs.wisc.edu/paradyn/mrnet"
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version('4.0.0', 'd00301c078cba57ef68613be32ceea2f')
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version('4.1.0', '5a248298b395b329e2371bf25366115c')
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version('5.0.1', '17f65738cf1b9f9b95647ff85f69ecdd')
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version('4.1.0', '5a248298b395b329e2371bf25366115c')
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version('4.0.0', 'd00301c078cba57ef68613be32ceea2f')
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# Add a patch that brings mrnet-5.0.1 up to date with the current development tree
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# The development tree contains fixes needed for the krell based tools
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variant('krellpatch', default=False, description="Build MRNet with krell openspeedshop based patch.")
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patch('krell-5.0.1.patch', when='@5.0.1+krellpatch')
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variant('lwthreads', default=False, description="Also build the MRNet LW threadsafe libraries")
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parallel = False
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depends_on("boost")
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#depends_on("boost")
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depends_on("boost@1.53.0")
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def install(self, spec, prefix):
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# Build the MRNet LW thread safe libraries when the krelloptions variant is present
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