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New packages: py-pymc3 and py-arviz (#15226)

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This PR adds py-pymc3 and py-arviz as a dependency.
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Glenn Johnson 2020-02-27 11:51:15 -06:00 committed by GitHub
parent 0d2f8e314b
commit 130a77f322
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var/spack/repos/builtin/packages/py-arviz/package.py Normal file
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# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyArviz(PythonPackage):
"""ArviZ (pronounced "AR-vees") is a Python package for exploratory
analysis of Bayesian models. Includes functions for posterior analysis,
model checking, comparison and diagnostics."""
homepage = "http://github.com/arviz-devs/arviz"
url = "https://pypi.io/packages/source/a/arviz/arviz-0.6.1.tar.gz"
version('0.6.1', sha256='435edf8db49c41a8fa198f959e7581063006c49a4efdef4755bb778db6fd4f72')
depends_on('py-setuptools', type='build')
depends_on('py-matplotlib@3.0:', type=('build', 'run'))
depends_on('py-numpy@1.12:', type=('build', 'run'))
depends_on('py-scipy@0.19:', type=('build', 'run'))
depends_on('py-packaging', type=('build', 'run'))
depends_on('py-pandas@0.23:', type=('build', 'run'))
depends_on('py-xarray@0.11:', type=('build', 'run'))
depends_on('py-netcdf4', type=('build', 'run'))

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# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyPymc3(PythonPackage):
"""PyMC3 is a Python package for Bayesian statistical modeling and
Probabilistic Machine Learning focusing on advanced Markov chain Monte
Carlo (MCMC) and variational inference (VI) algorithms. Its flexibility and
extensibility make it applicable to a large suite of problems."""
homepage = "http://github.com/pymc-devs/pymc3"
url = "https://pypi.io/packages/source/p/pymc3/pymc3-3.8.tar.gz"
version('3.8', sha256='1bb2915e4a29877c681ead13932b0b7d276f7f496e9c3f09ba96b977c99caf00')
depends_on('python@3.5.4:', type=('build', 'run'))
depends_on('py-setuptools', type='build')
depends_on('py-arviz@0.4.1:', type=('build', 'run'))
depends_on('py-theano@1.0.4:', type=('build', 'run'))
depends_on('py-numpy@1.13.0:', type=('build', 'run'))
depends_on('py-scipy@0.18.1:', type=('build', 'run'))
depends_on('py-pandas@0.18.0:', type=('build', 'run'))
depends_on('py-patsy@0.4.0:', type=('build', 'run'))
depends_on('py-tqdm@4.8.4:', type=('build', 'run'))
depends_on('py-h5py@2.7.0:', type=('build', 'run'))