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soapdenovo2: strip optimization flags from injected flags (#38846)

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* soapdenovo2: strip optimization flags from injected flags
* soapdenovo2: add maintainer
* soapdenovo2: only append on cflags
* soapdenovo2: clean up some wording and implementation
This commit is contained in:
snehring 2023-07-17 15:33:37 -05:00 committed by GitHub
parent e6235a8ff9
commit 1730bcaa31
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GPG Key ID: 4AEE18F83AFDEB23
1 changed files with 10 additions and 5 deletions
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15
var/spack/repos/builtin/packages/soapdenovo2/package.py
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@ -3,6 +3,8 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import re
from spack.package import *
@ -15,16 +17,19 @@ class Soapdenovo2(MakefilePackage):
homepage = "https://github.com/aquaskyline/SOAPdenovo2"
url = "https://github.com/aquaskyline/SOAPdenovo2/archive/r240.tar.gz"
maintainers("snehring")
version("242", sha256="a0043ceb41bc17a1c3fd2b8abe4f9029a60ad3edceb2b15af3c2cfabd36aa11b")
version("240", sha256="cc9e9f216072c0bbcace5efdead947e1c3f41f09baec5508c7b90f933a090909")
def flag_handler(self, name, flags):
if self.spec.satisfies("%gcc@10:"):
if name == "cflags" or name == "CFLAGS":
flags.append("-fcommon")
if name == "cxxflags" or name == "CXXFLAGS":
flags.append("-fcommon")
if name.lower() == "cflags" and self.spec.satisfies("%gcc@10:"):
flags.append("-fcommon")
if name.lower() in ["cflags", "cxxflags", "cppflags"]:
opt_flag = re.compile("-O.*")
# This package cannot compile with any optimization flag other
# than the -O3 specified in the makefile
flags = [f for f in flags if not opt_flag.match(f)]
return (flags, None, None)
def install(self, spec, prefix):