feat: add metacarpa@1.0.1 to spack (#44339)

* feat: add metacarpa@1.0.1 to spack
* fix: style issue
* Update copyright year
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Harry Sharma 2024-05-24 03:43:13 +01:00 committed by GitHub
parent 35ad6f52c1
commit 1d670ae744
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@ -0,0 +1,41 @@
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
from spack.pkg.builtin.boost import Boost
class Metacarpa(MakefilePackage):
"""
METACARPA is designed for meta-analysing genetic
association studies with overlapping or related samples,
when details of the overlap or relatedness are unknown.
It implements and expands a method first described by Province and Borecki.
"""
homepage = "https://www.sanger.ac.uk/tool/metacarpa/"
url = "https://github.com/hmgu-itg/metacarpa/archive/refs/tags/1.0.1.tar.gz"
version("1.0.1", sha256="7d8fc774a88bf75a53ef8f74462924abba9b99fccbaa9979654c01e4379fab91")
depends_on("boost@1.60.0")
depends_on(Boost.with_default_variants)
depends_on("cmake")
build_system = "Makefile"
build_directory = "src"
def edit(self, spec, prefix):
makefile = FileFilter("src/Makefile")
makefile.filter(r"^IDIR.*", "IDIR=" + spec["boost"].prefix.include)
makefile.filter(r"^LDIR.*", "LDIR=" + spec["boost"].prefix.lib)
def install(self, spec, prefix):
mkdirp(prefix.src)
install_tree("src", prefix.src)
mkdirp(prefix.bin)
install("src/metacarpa", prefix.bin)