Add new r-condop package (#14050)
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var/spack/repos/builtin/packages/r-condop/package.py
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var/spack/repos/builtin/packages/r-condop/package.py
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# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RCondop(RPackage):
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"""CONDOP: Condition-Dependent Operon Predictions.
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An implementation of the computational strategy for the comprehensive
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analysis of condition-dependent operon maps in prokaryotes proposed by
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Fortino et al. (2014) <doi:10.1186/1471-2105-15-145>. It uses RNA-seq
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transcriptome profiles to improve prokaryotic operon map inference."""
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homepage = "https://cloud.r-project.org/package=CONDOP"
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url = "https://cloud.r-project.org/src/contrib/CONDOP_1.0.tar.gz"
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list_url = "https://cloud.r-project.org/src/contrib/Archive/CONDOP"
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version('1.0', sha256='3a855880f5c6b33f949c7e6de53c8e014b4d72b7024a93878b344d3e52b5296a')
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depends_on('r-mclust', type=('build', 'run'))
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depends_on('r-earth', type=('build', 'run'))
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depends_on('r-plyr', type=('build', 'run'))
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depends_on('r-seqinr', type=('build', 'run'))
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depends_on('r-randomforest', type=('build', 'run'))
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depends_on('r-rminer', type=('build', 'run'))
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depends_on('r-genomicranges', type=('build', 'run'))
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depends_on('r-genomeinfodb', type=('build', 'run'))
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depends_on('r-s4vectors', type=('build', 'run'))
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depends_on('r-iranges', type=('build', 'run'))
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