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r-annotationdbi: new package (#5408)

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* r-annotationdbi: Create New Package.

* r-iranges: Create new package.

* r-s4vectors: Create new package.

* r-annotationdbi: Create new package.

* r-s4vectors: Delete file.

* r-annotationdbi: Correct format.

* r-iranges: Correct format.
This commit is contained in:
lingnanyuan
2017-09-25 17:37:31 -05:00
committed by Christoph Junghans
parent f94b23a249
commit 23235cf3e3
2 changed files with 89 additions and 0 deletions
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var/spack/repos/builtin/packages/r-annotationdbi/package.py Normal file
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##############################################################################
# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
#
#
from spack import *
class RAnnotationdbi(RPackage):
"""Provides user interface and database connection code for
annotation data packages using SQLite data storage."""
homepage = "https://www.bioconductor.org/packages/AnnotationDbi/"
url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/AnnotationDbi_1.38.2.tar.gz"
list_url = homepage
version('1.38.2', 'aea4a5cd1f752b59cb9f4a8dcca05734')
depends_on('r-biocgenerics', type=('build', 'run'))
depends_on('r-biobase', type=('build', 'run'))
depends_on('r-iranges', type=('build', 'run'))
depends_on('r-dbi', type=('build', 'run'))
depends_on('r-rsqlite', type=('build', 'run'))