zhangyiss/spack
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

cryoef: new package (#50486)

Browse Source
This commit is contained in:
Daniele Colombo 2025-05-21 02:05:34 +02:00 committed by GitHub
parent 22a7419235
commit 2a028144ba
No known key found for this signature in database
GPG Key ID: B5690EEEBB952194
1 changed files with 30 additions and 0 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

30
var/spack/repos/spack_repo/builtin/packages/cryoef/package.py Normal file
View File

@ -0,0 +1,30 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Cryoef(MakefilePackage):
"""An open-source software package for robust analysis of the orientation distribution
of cryoelectron microscopy data."""
homepage = "https://www.mrc-lmb.cam.ac.uk/crusso/cryoEF"
url = "https://www.mrc-lmb.cam.ac.uk/crusso/cryoEF/cryoEF_v1.1.0.tar.gz"
version("1.1.0", sha256="655ed8543a0226754bdeb6e0dd4efc0467f15dc4c9c963c44ef7b8d3d0e41b62")
depends_on("c", type="build")
depends_on("cxx", type="build")
depends_on("fftw-api@3")
def patch(self):
filter_file(
"-lfftw3", f"-lfftw3 {self.spec['fftw-api'].libs.ld_flags} -no-pie", "Makefile"
)
def install(self, spec, prefix):
install_tree("TestData", prefix.TestData)
install_tree("bin", prefix.bin)
install_tree("lib", prefix.lib)
install("PlotOD.py", prefix.bin)