'with_or_without' accepts bool variants
Fixes #4112 This commit extends the support of the AutotoolsPackage methods `with_or_without` and `enable_or_disable` to bool-valued variants. It also defines for those functions a convenience short-cut if the activation parameter is the prefix of a spec (like in `--with-{pkg}={prefix}`). This commit also includes: * Updates to viennarna and adios accordingly: they have been modified to use `enable_or_disable` and `with_or_without` * Improved docstrings in `autotools.py`. Raise `KeyError` if name is not a variant.
This commit is contained in:
parent
f502de4725
commit
32117c22de
@ -291,49 +291,161 @@ def check(self):
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self._if_make_target_execute('test')
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self._if_make_target_execute('check')
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def _activate_or_not(self, active, inactive, name, active_parameters=None):
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def _activate_or_not(
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self,
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name,
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activation_word,
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deactivation_word,
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activation_value=None
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):
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"""This function contains the current implementation details of
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:py:meth:`~.AutotoolsPackage.with_or_without` and
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:py:meth:`~.AutotoolsPackage.enable_or_disable`.
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Args:
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name (str): name of the variant that is being processed
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activation_word (str): the default activation word ('with' in the
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case of ``with_or_without``)
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deactivation_word (str): the default deactivation word ('without'
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in the case of ``with_or_without``)
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activation_value (callable): callable that accepts a single
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value. This value is either one of the allowed values for a
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multi-valued variant or the name of a bool-valued variant.
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Returns the parameter to be used when the value is activated.
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The special value 'prefix' can also be assigned and will return
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``spec[name].prefix`` as activation parameter.
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Examples:
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Given a package with:
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.. code-block:: python
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variant('foo', values=('x', 'y'), description='')
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variant('bar', default=True, description='')
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calling this function like:
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.. code-block:: python
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_activate_or_not(
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'foo', 'with', 'without', activation_value='prefix'
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)
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_activate_or_not('bar', 'with', 'without')
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will generate the following configuration options:
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.. code-block:: console
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--with-x=<prefix-to-x> --without-y --with-bar
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for ``<spec-name> foo=x +bar``
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Returns:
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list of strings that corresponds to the activation/deactivation
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of the variant that has been processed
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Raises:
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KeyError: if name is not among known variants
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"""
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spec = self.spec
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args = []
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if activation_value == 'prefix':
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activation_value = lambda x: spec[x].prefix
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# Defensively look that the name passed as argument is among
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# variants
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if name not in self.variants:
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msg = '"{0}" is not a variant of "{1}"'
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raise KeyError(msg.format(name, self.name))
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# Create a list of pairs. Each pair includes a configuration
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# option and whether or not that option is activated
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if set(self.variants[name].values) == set((True, False)):
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# BoolValuedVariant carry information about a single option.
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# Nonetheless, for uniformity of treatment we'll package them
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# in an iterable of one element.
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condition = '+{name}'.format(name=name)
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options = [(name, condition in spec)]
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else:
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condition = '{name}={value}'
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options = [
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(value, condition.format(name=name, value=value) in spec)
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for value in self.variants[name].values
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]
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# For each allowed value in the list of values
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for value in self.variants[name].values:
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# Check if the value is active in the current spec
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condition = '{name}={value}'.format(name=name, value=value)
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activated = condition in spec
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for option_value, activated in options:
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# Search for an override in the package for this value
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override_name = '{0}_or_{1}_{2}'.format(active, inactive, value)
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override_name = '{0}_or_{1}_{2}'.format(
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activation_word, deactivation_word, option_value
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)
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line_generator = getattr(self, override_name, None)
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# If not available use a sensible default
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if line_generator is None:
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def _default_generator(is_activated):
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if is_activated:
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line = '--{0}-{1}'.format(active, value)
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if active_parameters is not None and active_parameters(value): # NOQA=ignore=E501
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line += '={0}'.format(active_parameters(value))
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line = '--{0}-{1}'.format(
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activation_word, option_value
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)
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if activation_value is not None and activation_value(option_value): # NOQA=ignore=E501
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line += '={0}'.format(
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activation_value(option_value)
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)
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return line
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return '--{0}-{1}'.format(inactive, value)
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return '--{0}-{1}'.format(deactivation_word, option_value)
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line_generator = _default_generator
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args.append(line_generator(activated))
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return args
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def with_or_without(self, name, active_parameters=None):
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"""Inspects the multi-valued variant 'name' and returns the configure
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arguments that activate / deactivate the selected feature.
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def with_or_without(self, name, activation_value=None):
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"""Inspects a variant and returns the arguments that activate
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or deactivate the selected feature(s) for the configure options.
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:param str name: name of a valid multi-valued variant
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:param callable active_parameters: if present accepts a single value
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and returns the parameter to be used leading to an entry of the
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type '--with-{name}={parameter}
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This function works on all type of variants. For bool-valued variants
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it will return by default ``--with-{name}`` or ``--without-{name}``.
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For other kinds of variants it will cycle over the allowed values and
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return either ``--with-{value}`` or ``--without-{value}``.
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If activation_value is given, then for each possible value of the
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variant, the option ``--with-{value}=activation_value(value)`` or
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``--without-{value}`` will be added depending on whether or not
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``variant=value`` is in the spec.
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Args:
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name (str): name of a valid multi-valued variant
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activation_value (callable): callable that accepts a single
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value and returns the parameter to be used leading to an entry
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of the type ``--with-{name}={parameter}``.
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The special value 'prefix' can also be assigned and will return
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``spec[name].prefix`` as activation parameter.
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Returns:
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list of arguments to configure
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"""
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return self._activate_or_not(name, 'with', 'without', activation_value)
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def enable_or_disable(self, name, activation_value=None):
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"""Same as :py:meth:`~.AutotoolsPackage.with_or_without` but substitute
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``with`` with ``enable`` and ``without`` with ``disable``.
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Args:
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name (str): name of a valid multi-valued variant
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activation_value (callable): if present accepts a single value
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and returns the parameter to be used leading to an entry of the
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type ``--enable-{name}={parameter}``
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The special value 'prefix' can also be assigned and will return
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``spec[name].prefix`` as activation parameter.
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Returns:
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list of arguments to configure
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"""
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return self._activate_or_not(
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'with', 'without', name, active_parameters
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)
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def enable_or_disable(self, name, active_parameters=None):
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"""Inspects the multi-valued variant 'name' and returns the configure
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arguments that activate / deactivate the selected feature.
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"""
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return self._activate_or_not(
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'enable', 'disable', name, active_parameters
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name, 'enable', 'disable', activation_value
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)
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run_after('install')(PackageBase._run_default_install_time_test_callbacks)
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@ -53,20 +53,23 @@ def test_with_or_without(self):
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pkg = spack.repo.get(s)
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# Called without parameters
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l = pkg.with_or_without('foo')
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assert '--with-bar' in l
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assert '--without-baz' in l
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assert '--no-fee' in l
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options = pkg.with_or_without('foo')
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assert '--with-bar' in options
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assert '--without-baz' in options
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assert '--no-fee' in options
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def activate(value):
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return 'something'
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l = pkg.with_or_without('foo', active_parameters=activate)
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assert '--with-bar=something' in l
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assert '--without-baz' in l
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assert '--no-fee' in l
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options = pkg.with_or_without('foo', activation_value=activate)
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assert '--with-bar=something' in options
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assert '--without-baz' in options
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assert '--no-fee' in options
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l = pkg.enable_or_disable('foo')
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assert '--enable-bar' in l
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assert '--disable-baz' in l
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assert '--disable-fee' in l
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options = pkg.enable_or_disable('foo')
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assert '--enable-bar' in options
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assert '--disable-baz' in options
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assert '--disable-fee' in options
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options = pkg.with_or_without('bvv')
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assert '--with-bvv' in options
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@ -50,6 +50,8 @@ class A(AutotoolsPackage):
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multi=False
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)
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variant('bvv', default=True, description='The good old BV variant')
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depends_on('b', when='foobar=bar')
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def with_or_without_fee(self, activated):
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@ -61,9 +61,14 @@ class Adios(AutotoolsPackage):
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# transports and serial file converters
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variant('hdf5', default=False, description='Enable parallel HDF5 transport and serial bp2h5 converter')
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variant('netcdf', default=False, description='Enable netcdf support')
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variant('flexpath', default=False, description='Enable flexpath transport')
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variant('dataspaces', default=False, description='Enable dataspaces transport')
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variant('staging', default=False, description='Enable dataspaces and flexpath staging transports')
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variant(
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'staging',
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default=None,
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values=('flexpath', 'dataspaces'),
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multi=True,
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description='Enable dataspaces and/or flexpath staging transports'
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)
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depends_on('autoconf', type='build')
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depends_on('automake', type='build')
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@ -100,15 +105,27 @@ class Adios(AutotoolsPackage):
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patch('adios_1100.patch', when='@:1.10.0^hdf5@1.10:')
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def validate(self, spec):
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"""
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Checks if incompatible variants have been activated at the same time
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:param spec: spec of the package
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:raises RuntimeError: in case of inconsistencies
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"""Checks if incompatible variants have been activated at the same time
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Args:
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spec: spec of the package
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Raises:
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RuntimeError: in case of inconsistencies
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"""
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if '+fortran' in spec and not self.compiler.fc:
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msg = 'cannot build a fortran variant without a fortran compiler'
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raise RuntimeError(msg)
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def with_or_without_hdf5(self, activated):
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if activated:
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return '--with-phdf5={0}'.format(
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self.spec['hdf5'].prefix
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)
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return '--without-phdf5'
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def configure_args(self):
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spec = self.spec
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self.validate(spec)
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@ -118,66 +135,31 @@ def configure_args(self):
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'CFLAGS={0}'.format(self.compiler.pic_flag)
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]
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if '+shared' in spec:
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extra_args.append('--enable-shared')
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extra_args += self.enable_or_disable('shared')
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extra_args += self.enable_or_disable('fortran')
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if '+mpi' in spec:
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env['MPICC'] = spec['mpi'].mpicc
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env['MPICXX'] = spec['mpi'].mpicxx
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extra_args.append('--with-mpi=%s' % spec['mpi'].prefix)
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else:
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extra_args.append('--without-mpi')
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if '+infiniband' in spec:
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extra_args.append('--with-infiniband')
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else:
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extra_args.append('--with-infiniband=no')
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if '+fortran' in spec:
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extra_args.append('--enable-fortran')
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else:
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extra_args.append('--disable-fortran')
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extra_args += self.with_or_without('mpi', activation='prefix')
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extra_args += self.with_or_without('infiniband')
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# Transforms
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if '+zlib' in spec:
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extra_args.append('--with-zlib=%s' % spec['zlib'].prefix)
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else:
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extra_args.append('--without-zlib')
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if '+bzip2' in spec:
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extra_args.append('--with-bzip2=%s' % spec['bzip2'].prefix)
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else:
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extra_args.append('--without-bzip2')
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if '+szip' in spec:
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extra_args.append('--with-szip=%s' % spec['szip'].prefix)
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else:
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extra_args.append('--without-szip')
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if '+zfp' in spec:
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extra_args.append('--with-zfp=%s' % spec['zfp'].prefix)
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else:
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extra_args.append('--without-zfp')
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if '+sz' in spec:
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extra_args.append('--with-sz=%s' % spec['sz'].prefix)
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else:
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extra_args.append('--without-sz')
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variants = ['zlib', 'bzip2', 'szip', 'zfp', 'sz']
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# External I/O libraries
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if '+hdf5' in spec:
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extra_args.append('--with-phdf5=%s' % spec['hdf5'].prefix)
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else:
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extra_args.append('--without-phdf5')
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if '+netcdf' in spec:
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extra_args.append('--with-netcdf=%s' % spec['netcdf'].prefix)
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else:
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extra_args.append('--without-netcdf')
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variants += ['hdf5', 'netcdf']
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for x in variants:
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extra_args += self.with_or_without(x, activation='prefix')
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# Staging transports
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if '+flexpath' in spec or '+staging' in spec:
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extra_args.append('--with-flexpath=%s' % spec['libevpath'].prefix)
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else:
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extra_args.append('--without-flexpath')
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if '+dataspaces' in spec or '+staging' in spec:
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extra_args.append('--with-dataspaces=%s'
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% spec['dataspaces'].prefix)
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else:
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extra_args.append('--without-dataspaces')
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def with_staging(name):
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if name == 'flexpath':
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return spec['libevpath'].prefix
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return spec[name].prefix
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extra_args += self.with_or_without('staging', activation=with_staging)
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return extra_args
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@ -27,8 +27,9 @@
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class Viennarna(AutotoolsPackage):
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"""The ViennaRNA Package consists of a C code library and several
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stand-alone programs for the prediction and comparison of RNA secondary
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structures."""
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stand-alone programs for the prediction and comparison of RNA secondary
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structures.
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"""
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homepage = "https://www.tbi.univie.ac.at/RNA/"
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url = "https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_3_x/ViennaRNA-2.3.5.tar.gz"
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@ -49,19 +50,12 @@ def url_for_version(self, version):
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return url.format(version.up_to(2).underscored, version)
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def configure_args(self):
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args = []
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if '+sse' in self.spec:
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args.append('--enable-sse')
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else:
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args.append('--disable-sse')
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if '~python' in self.spec:
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args.append('--without-python')
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else:
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args.append('--with-python')
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if '~perl' in self.spec:
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args.append('--without-perl')
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else:
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args.append('--with-perl')
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args = self.enable_or_disable('sse')
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args += self.with_or_without('python')
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args += self.with_or_without('perl')
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if 'python@3:' in self.spec:
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args.append('--with-python3')
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return args
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