diff --git a/var/spack/repos/builtin/packages/trimmomatic/trimmomatic.sh b/var/spack/repos/builtin/packages/trimmomatic/trimmomatic.sh index 55068f6a078..88990aa3ec8 100644 --- a/var/spack/repos/builtin/packages/trimmomatic/trimmomatic.sh +++ b/var/spack/repos/builtin/packages/trimmomatic/trimmomatic.sh @@ -1,3 +1,3 @@ #!/bin/sh # convenience wrapper for the trimmomatic.jar file -java -jar trimmomatic.jar "$@" +java $JAVA_ARGS $JAVA_OPTS -jar trimmomatic.jar "$@"