mvapich: add new package in preparation for v3.0 (#34276)
* Add new file for MVAPICH 3.0a release Creating this as a new package since it requires some new configuration options and because we are moving to the name "MVAPICH" and droping the 2 (following a similar move by MPICH). Co-authored-by: Nat Shineman <shineman.5@osu.edu> Co-authored-by: Matthew Lieber <lieber.31@osu.edu>
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var/spack/repos/builtin/packages/mvapich/package.py
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293
var/spack/repos/builtin/packages/mvapich/package.py
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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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import os.path
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import re
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import sys
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from spack.package import *
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class Mvapich(AutotoolsPackage):
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"""Mvapich is a High-Performance MPI Library for clusters with diverse
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networks (InfiniBand, Omni-Path, Ethernet/iWARP, and RoCE) and computing
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platforms (x86 (Intel and AMD), ARM and OpenPOWER)"""
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homepage = "https://mvapich.cse.ohio-state.edu/userguide/userguide_spack/"
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url = "https://mvapich.cse.ohio-state.edu/download/mvapich/mv2/mvapich2-3.0a.tar.gz"
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list_url = "https://mvapich.cse.ohio-state.edu/downloads/"
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maintainers = ["natshineman", "harisubramoni", "ndcontini"]
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executables = ["^mpiname$", "^mpichversion$"]
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# Prefer the latest stable release
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version("3.0a", "71f6593bfbfe9a9f6f5c750904461f007bf74bec479544e4da375b7d4a56b2ac")
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provides("mpi")
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provides("mpi@:3.1")
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variant("wrapperrpath", default=True, description="Enable wrapper rpath")
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variant("debug", default=False, description="Enable debug info and error messages at run-time")
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variant("cuda", default=False, description="Enable CUDA extension")
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variant("regcache", default=True, description="Enable memory registration cache")
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# Accepted values are:
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# single - No threads (MPI_THREAD_SINGLE)
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# funneled - Only the main thread calls MPI (MPI_THREAD_FUNNELED)
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# serialized - User serializes calls to MPI (MPI_THREAD_SERIALIZED)
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# multiple - Fully multi-threaded (MPI_THREAD_MULTIPLE)
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# runtime - Alias to "multiple"
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variant(
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"threads",
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default="multiple",
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values=("single", "funneled", "serialized", "multiple"),
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multi=False,
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description="Control the level of thread support",
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)
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# 32 is needed when job size exceeds 32768 cores
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variant(
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"ch3_rank_bits",
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default="32",
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values=("16", "32"),
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multi=False,
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description="Number of bits allocated to the rank field (16 or 32)",
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)
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variant(
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"process_managers",
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description="List of the process managers to activate",
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values=disjoint_sets(("auto",), ("slurm",), ("hydra", "gforker", "remshell"))
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.prohibit_empty_set()
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.with_error("'slurm' or 'auto' cannot be activated along with " "other process managers")
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.with_default("auto")
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.with_non_feature_values("auto"),
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)
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variant(
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"netmod",
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description="Select the netmod to be enabled for this build."
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"For IB/RoCE systems, use the ucx netmod, for interconnects supported "
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"by libfabrics, use the ofi netmod. For more info, visit the "
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"homepage url.",
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default="ofi",
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values=(
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"ofi",
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"ucx",
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),
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multi=False,
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)
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variant(
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"alloca", default=False, description="Use alloca to allocate temporary memory if available"
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)
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variant(
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"file_systems",
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description="List of the ROMIO file systems to activate",
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values=auto_or_any_combination_of("lustre", "gpfs", "nfs", "ufs"),
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)
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depends_on("findutils", type="build")
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depends_on("bison", type="build")
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depends_on("pkgconfig", type="build")
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depends_on("zlib")
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depends_on("libpciaccess", when=(sys.platform != "darwin"))
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depends_on("libxml2")
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depends_on("cuda", when="+cuda")
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depends_on("libfabric", when="netmod=ofi")
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depends_on("slurm", when="process_managers=slurm")
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depends_on("ucx", when="netmod=ucx")
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filter_compiler_wrappers("mpicc", "mpicxx", "mpif77", "mpif90", "mpifort", relative_root="bin")
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@classmethod
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def determine_version(cls, exe):
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if exe.endswith("mpichversion"):
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output = Executable(exe)(output=str, error=str)
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match = re.search(r"^MVAPICH2 Version:\s*(\S+)", output)
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elif exe.endswith("mpiname"):
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output = Executable(exe)("-a", output=str, error=str)
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match = re.search(r"^MVAPICH2 (\S+)", output)
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return match.group(1) if match else None
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@property
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def libs(self):
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query_parameters = self.spec.last_query.extra_parameters
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libraries = ["libmpi"]
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if "cxx" in query_parameters:
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libraries = ["libmpicxx"] + libraries
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return find_libraries(libraries, root=self.prefix, shared=True, recursive=True)
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@property
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def process_manager_options(self):
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spec = self.spec
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other_pms = []
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for x in ("hydra", "gforker", "remshell"):
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if "process_managers={0}".format(x) in spec:
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other_pms.append(x)
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opts = []
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if len(other_pms) > 0:
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opts = ["--with-pm=%s" % ":".join(other_pms)]
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# See: http://slurm.schedmd.com/mpi_guide.html#mvapich2
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if "process_managers=slurm" in spec:
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opts = [
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"--with-pm=slurm",
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"--with-pmi=simple",
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"--with-slurm={0}".format(spec["slurm"].prefix),
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"CFLAGS=-I{0}/include/slurm".format(spec["slurm"].prefix),
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]
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return opts
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@property
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def network_options(self):
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opts = []
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# From here on I can suppose that only one variant has been selected
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if "netmod=ofi" in self.spec:
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opts = ["--with-device=ch4:ofi"]
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elif "netmod=ucx" in self.spec:
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opts = ["--with-device=ch4:ucx"]
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return opts
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@property
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def file_system_options(self):
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spec = self.spec
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fs = []
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for x in ("lustre", "gpfs", "nfs", "ufs"):
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if "file_systems={0}".format(x) in spec:
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fs.append(x)
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opts = []
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if len(fs) > 0:
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opts.append("--with-file-system=%s" % "+".join(fs))
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return opts
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def flag_handler(self, name, flags):
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if name == "fflags":
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# https://bugzilla.redhat.com/show_bug.cgi?id=1795817
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if self.spec.satisfies("%gcc@10:"):
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if flags is None:
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flags = []
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flags.append("-fallow-argument-mismatch")
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return (flags, None, None)
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def setup_build_environment(self, env):
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# mvapich2 configure fails when F90 and F90FLAGS are set
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env.unset("F90")
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env.unset("F90FLAGS")
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def setup_run_environment(self, env):
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env.set("MPI_ROOT", self.prefix)
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# Because MPI functions as a compiler, we need to treat it as one and
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# add its compiler paths to the run environment.
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self.setup_compiler_environment(env)
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def setup_dependent_build_environment(self, env, dependent_spec):
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self.setup_compiler_environment(env)
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# use the Spack compiler wrappers under MPI
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env.set("MPICH_CC", spack_cc)
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env.set("MPICH_CXX", spack_cxx)
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env.set("MPICH_F77", spack_f77)
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env.set("MPICH_F90", spack_fc)
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env.set("MPICH_FC", spack_fc)
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def setup_compiler_environment(self, env):
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# For Cray MPIs, the regular compiler wrappers *are* the MPI wrappers.
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# Cray MPIs always have cray in the module name, e.g. "cray-mvapich"
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if self.spec.satisfies("platform=cray"):
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env.set("MPICC", spack_cc)
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env.set("MPICXX", spack_cxx)
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env.set("MPIF77", spack_fc)
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env.set("MPIF90", spack_fc)
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else:
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env.set("MPICC", join_path(self.prefix.bin, "mpicc"))
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env.set("MPICXX", join_path(self.prefix.bin, "mpicxx"))
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env.set("MPIF77", join_path(self.prefix.bin, "mpif77"))
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env.set("MPIF90", join_path(self.prefix.bin, "mpif90"))
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def setup_dependent_package(self, module, dependent_spec):
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# For Cray MPIs, the regular compiler wrappers *are* the MPI wrappers.
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# Cray MPIs always have cray in the module name, e.g. "cray-mvapich"
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if self.spec.satisfies("platform=cray"):
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self.spec.mpicc = spack_cc
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self.spec.mpicxx = spack_cxx
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self.spec.mpifc = spack_fc
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self.spec.mpif77 = spack_f77
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else:
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self.spec.mpicc = join_path(self.prefix.bin, "mpicc")
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self.spec.mpicxx = join_path(self.prefix.bin, "mpicxx")
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self.spec.mpifc = join_path(self.prefix.bin, "mpif90")
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self.spec.mpif77 = join_path(self.prefix.bin, "mpif77")
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self.spec.mpicxx_shared_libs = [
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os.path.join(self.prefix.lib, "libmpicxx.{0}".format(dso_suffix)),
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os.path.join(self.prefix.lib, "libmpi.{0}".format(dso_suffix)),
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]
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@run_before("configure")
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def die_without_fortran(self):
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# Until we can pass variants such as +fortran through virtual
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# dependencies depends_on('mpi'), require Fortran compiler to
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# avoid delayed build errors in dependents.
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if (self.compiler.f77 is None) or (self.compiler.fc is None):
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raise InstallError("Mvapich2 requires both C and Fortran compilers!")
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def configure_args(self):
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spec = self.spec
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args = [
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"--enable-shared",
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"--enable-romio",
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"--disable-silent-rules",
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"--disable-new-dtags",
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"--enable-fortran=all",
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"--enable-threads={0}".format(spec.variants["threads"].value),
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"--with-ch3-rank-bits={0}".format(spec.variants["ch3_rank_bits"].value),
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"--enable-wrapper-rpath={0}".format("no" if "~wrapperrpath" in spec else "yes"),
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]
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args.extend(self.enable_or_disable("alloca"))
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if "+debug" in self.spec:
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args.extend(
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[
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"--disable-fast",
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"--enable-error-checking=runtime",
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"--enable-error-messages=all",
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# Permits debugging with TotalView
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"--enable-g=dbg",
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"--enable-debuginfo",
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]
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)
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else:
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args.append("--enable-fast=all")
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if "+cuda" in self.spec:
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args.extend(["--enable-cuda", "--with-cuda={0}".format(spec["cuda"].prefix)])
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else:
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args.append("--disable-cuda")
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if "+regcache" in self.spec:
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args.append("--enable-registration-cache")
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else:
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args.append("--disable-registration-cache")
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args.extend(self.process_manager_options)
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args.extend(self.network_options)
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args.extend(self.file_system_options)
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return args
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