Merge pull request #1118 from epfl-scitas/packages/swift_durham

swift : added new package

var/spack/repos/builtin/packages/autoconf/package.py

@@ -24,18 +24,36 @@
 ##############################################################################
 from spack import *
 
+
 class Autoconf(Package):
-    """Autoconf -- system configuration part of autotools"""
+    """
-    homepage = "https://www.gnu.org/software/autoconf/"
+    Autoconf -- system configuration part of autotools
-    url      = "http://ftp.gnu.org/gnu/autoconf/autoconf-2.69.tar.gz"
+    """
+    homepage = 'https://www.gnu.org/software/autoconf/'
+    url = 'http://ftp.gnu.org/gnu/autoconf/autoconf-2.69.tar.gz'
 
     version('2.69', '82d05e03b93e45f5a39b828dc9c6c29b')
     version('2.62', '6c1f3b3734999035d77da5024aab4fbd')
 
-    depends_on("m4")
+    depends_on('m4')
+
+    def _make_executable(self, name):
+        return Executable(join_path(self.prefix.bin, name))
+
+    def setup_dependent_package(self, module, dependent_spec):
+        # Autoconf is very likely to be a build dependency,
+        # so we add the tools it provides to the dependent module
+        executables = ['autoconf',
+                       'autoheader',
+                       'autom4te',
+                       'autoreconf',
+                       'autoscan',
+                       'autoupdate',
+                       'ifnames']
+        for name in executables:
+            setattr(module, name, self._make_executable(name))
 
     def install(self, spec, prefix):
         configure("--prefix=%s" % prefix)
-
         make()
         make("install")

var/spack/repos/builtin/packages/automake/package.py

@@ -24,10 +24,13 @@
 ##############################################################################
 from spack import *
 
+
 class Automake(Package):
-    """Automake -- make file builder part of autotools"""
+    """
-    homepage = "http://www.gnu.org/software/automake/"
+    Automake -- make file builder part of autotools
-    url      = "http://ftp.gnu.org/gnu/automake/automake-1.14.tar.gz"
+    """
+    homepage = 'http://www.gnu.org/software/automake/'
+    url      = 'http://ftp.gnu.org/gnu/automake/automake-1.14.tar.gz'
 
     version('1.15',   '716946a105ca228ab545fc37a70df3a3')
     version('1.14.1', 'd052a3e884631b9c7892f2efce542d75')
@@ -35,8 +38,17 @@ class Automake(Package):
 
     depends_on('autoconf')
 
+    def _make_executable(self, name):
+        return Executable(join_path(self.prefix.bin, name))
+
+    def setup_dependent_package(self, module, dependent_spec):
+        # Automake is very likely to be a build dependency,
+        # so we add the tools it provides to the dependent module
+        executables = ['aclocal', 'automake']
+        for name in executables:
+            setattr(module, name, self._make_executable(name))
+
     def install(self, spec, prefix):
         configure("--prefix=%s" % prefix)
-
         make()
         make("install")

var/spack/repos/builtin/packages/libtool/package.py

@@ -24,18 +24,30 @@
 ##############################################################################
 from spack import *
 
-class Libtool(Package):
-    """libtool -- library building part of autotools"""
-    homepage = "https://www.gnu.org/software/libtool/"
-    url      = "http://ftpmirror.gnu.org/libtool/libtool-2.4.2.tar.gz"
 
-    version('2.4.6' , 'addf44b646ddb4e3919805aa88fa7c5e')
+class Libtool(Package):
-    version('2.4.2' , 'd2f3b7d4627e69e13514a40e72a24d50')
+    """
+    libtool -- library building part of autotools
+    """
+    homepage = 'https://www.gnu.org/software/libtool/'
+    url = 'http://ftpmirror.gnu.org/libtool/libtool-2.4.2.tar.gz'
+
+    version('2.4.6', 'addf44b646ddb4e3919805aa88fa7c5e')
+    version('2.4.2', 'd2f3b7d4627e69e13514a40e72a24d50')
 
     depends_on('m4')
 
+    def _make_executable(self, name):
+        return Executable(join_path(self.prefix.bin, name))
+
+    def setup_dependent_package(self, module, dependent_spec):
+        # Automake is very likely to be a build dependency,
+        # so we add the tools it provides to the dependent module
+        executables = ['libtoolize', 'libtool']
+        for name in executables:
+            setattr(module, name, self._make_executable(name))
+
     def install(self, spec, prefix):
         configure("--prefix=%s" % prefix)
-
         make()
         make("install")

var/spack/repos/builtin/packages/swiftsim/package.py

@@ -0,0 +1,79 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+
+from spack import *
+
+import spack.environment
+import llnl.util.tty as tty
+
+# Needed to be able to download from the Durham gitlab repository
+tty.warn('Setting "GIT_SSL_NO_VERIFY=1"')
+tty.warn('This is needed to clone SWIFT repository')
+gitlab_env = spack.environment.EnvironmentModifications()
+gitlab_env.set('GIT_SSL_NO_VERIFY', 1)
+gitlab_env.apply_modifications()
+
+
+class Swiftsim(Package):
+    """
+    SPH With Inter-dependent Fine-grained Tasking (SWIFT) provides
+    astrophysicists with a state of the art framework to perform
+    particle based simulations.
+    """
+
+    homepage = 'http://icc.dur.ac.uk/swift/'
+    url = 'http://gitlab.cosma.dur.ac.uk/swift/swiftsim/repository/archive.tar.gz?ref=v0.3.0'
+
+    version('0.3.0', git='https://gitlab.cosma.dur.ac.uk/swift/swiftsim.git', tag='v0.3.0')
+
+    variant('mpi', default=True, description='Enable distributed memory parallelism')
+
+    # Build dependencies
+    depends_on('autoconf')
+    depends_on('automake')
+    depends_on('libtool')
+    depends_on('m4')
+    # link-time / run-time dependencies
+    depends_on('mpi', when='+mpi')
+    depends_on('metis')
+    depends_on('hdf5~mpi', when='~mpi')
+    depends_on('hdf5+mpi', when='+mpi')
+
+    def install(self, spec, prefix):
+        # Generate configure from configure.ac
+        # and Makefile.am
+        libtoolize()
+        aclocal()
+        autoconf()
+        autogen = Executable('./autogen.sh')
+        autogen()
+
+        # Configure and install
+        options = ['--prefix=%s' % prefix,
+                   '--enable-mpi' if '+mpi' in spec else '--disable-mpi',
+                   '--enable-optimization']
+        configure(*options)
+        make()
+        make("install")