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Standardize package names: lower-case, not Mixed_CASE (#2475)

Browse Source 
* Rename packages

* Upcasing depends_on() in packages.

* Downcased extends('r')

* Fixed erroneously changed URL that had slipped through.

* Fixed typo

* Fixed link from documentation into package source code.

* Fixed another doc problem.

* Changed underscores to dashes in package names.

* Added test to enforce lowercase, no-underscore naming convention.

* Fix r-xgboost

* Downcase more instances of 'R' in package auto-creation.

* Fix test.

* Converted unit test packages to use dashes not underscores

* Downcase `r` in the docs.

* Update module_file_support.rst

Fix r->R for class R.
This commit is contained in:
Elizabeth Fischer
2017-01-04 21:24:07 -05:00
committed by Todd Gamblin
parent 4e653254c5
commit 3dd4a01a5e
205 changed files with 215 additions and 204 deletions
Download Patch File Download Diff File Expand all files Collapse all files

0
var/spack/repos/builtin.mock/packages/direct_mpich/package.py → var/spack/repos/builtin.mock/packages/direct-mpich/package.py
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2
var/spack/repos/builtin.mock/packages/indirect_mpich/package.py → var/spack/repos/builtin.mock/packages/indirect-mpich/package.py
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@@ -36,7 +36,7 @@ class IndirectMpich(Package):
version(1.0, 'foobarbaz')
depends_on('mpi')
depends_on('direct_mpich')
depends_on('direct-mpich')
def install(self, spec, prefix):
pass

0
var/spack/repos/builtin.mock/packages/simple_inheritance/package.py → var/spack/repos/builtin.mock/packages/simple-inheritance/package.py
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0
var/spack/repos/builtin.mock/packages/trivial_install_test_package/package.py → var/spack/repos/builtin.mock/packages/trivial-install-test-package/package.py
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2
var/spack/repos/builtin/packages/cleverleaf/package.py
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@@ -40,7 +40,7 @@ class Cleverleaf(Package):
version('develop', git='https://github.com/UK-MAC/CleverLeaf_ref.git',
branch='develop')
depends_on("SAMRAI@3.8.0:")
depends_on("samrai@3.8.0:")
depends_on("hdf5+mpi")
depends_on("boost")
depends_on('cmake', type='build')

0
var/spack/repos/builtin/packages/etsf_io/package.py → var/spack/repos/builtin/packages/etsf-io/package.py
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0
var/spack/repos/builtin/packages/fastx_toolkit/package.py → var/spack/repos/builtin/packages/fastx-toolkit/package.py
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0
var/spack/repos/builtin/packages/globus_toolkit/package.py → var/spack/repos/builtin/packages/globus-toolkit/package.py
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2
var/spack/repos/builtin/packages/gource/package.py
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@@ -47,7 +47,7 @@ class Gource(Package):
depends_on('libpng')
depends_on('pcre')
depends_on('sdl2')
depends_on('sdl2_image')
depends_on('sdl2-image')
def install(self, spec, prefix):
make_args = ['--prefix=%s' % prefix,

2
var/spack/repos/builtin/packages/ImageMagick/package.py → var/spack/repos/builtin/packages/image-magick/package.py
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@@ -25,7 +25,7 @@
from spack import *
class Imagemagick(Package):
class ImageMagick(Package):
"""ImageMagick is a software suite to create, edit, compose,
or convert bitmap images."""

2
var/spack/repos/builtin/packages/julia/package.py
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@@ -222,7 +222,7 @@ def install(self, spec, prefix):
if "+plot" in spec:
julia("-e", 'Pkg.add("PyPlot"); using PyPlot')
julia("-e", 'Pkg.add("Colors"); using Colors')
# These require maybe Gtk and ImageMagick
# These require maybe gtk and image-magick
julia("-e", 'Pkg.add("Plots"); using Plots')
julia("-e", 'Pkg.add("PlotRecipes"); using PlotRecipes')
julia("-e", 'Pkg.add("UnicodePlots"); using UnicodePlots')

0
var/spack/repos/builtin/packages/libNBC/package.py → var/spack/repos/builtin/packages/libnbc/package.py
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2
var/spack/repos/builtin/packages/LuaJIT/package.py → var/spack/repos/builtin/packages/lua-jit/package.py
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@@ -26,7 +26,7 @@
from spack import *
class Luajit(Package):
class LuaJit(Package):
"""Flast flexible JITed lua"""
homepage = "http://www.luajit.org"
url = "http://luajit.org/download/LuaJIT-2.0.4.tar.gz"

0
var/spack/repos/builtin/packages/Mitos/package.py → var/spack/repos/builtin/packages/mitos/package.py
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4
var/spack/repos/builtin/packages/octave/package.py
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@@ -85,7 +85,7 @@ class Octave(Package):
depends_on('glpk', when='+glpk')
depends_on('gl2ps', when='+gl2ps')
depends_on('gnuplot', when='+gnuplot')
depends_on('ImageMagick', when='+magick')
depends_on('image-magick', when='+magick')
depends_on('hdf5', when='+hdf5')
depends_on('jdk', when='+jdk')
depends_on('llvm', when='+llvm')
@@ -162,7 +162,7 @@ def install(self, spec, prefix):
if '+magick' in spec:
config_args.append("--with-magick=%s"
% spec['ImageMagick'].prefix.lib)
% spec['image-magick'].prefix.lib)
if '+hdf5' in spec:
config_args.extend([

4
var/spack/repos/builtin/packages/octopus/package.py
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@@ -42,8 +42,8 @@ class Octopus(Package):
depends_on('fftw+mpi')
# optional dependencies:
# TODO: scalapack, metis, parmetis, netcdf, etsf_io, SPARSKIT, ARPACK,
# FEAST, Libfm, PFFT, ISF, PNFFT
# TODO: scalapack, metis, parmetis, netcdf, etsf-io, sparskit, arpack,
# feast, libfm, pfft, isf, pnfft
def install(self, spec, prefix):
lapack = spec['lapack'].lapack_libs

0
var/spack/repos/builtin/packages/pmgr_collective/package.py → var/spack/repos/builtin/packages/pmgr-collective/package.py
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2
var/spack/repos/builtin/packages/py-csvkit/package.py
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@@ -39,7 +39,7 @@ class PyCsvkit(Package):
depends_on('py-dateutil', type=nolink)
depends_on('py-dbf', type=nolink)
depends_on('py-xlrd', type=nolink)
depends_on('py-SQLAlchemy', type=nolink)
depends_on('py-sqlalchemy', type=nolink)
depends_on('py-six', type=nolink)
depends_on('py-openpyxl', type=nolink)

2
var/spack/repos/builtin/packages/py-matplotlib/package.py
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@@ -76,7 +76,7 @@ class PyMatplotlib(Package):
# --------- Optional external programs
# ffmpeg/avconv or mencoder
depends_on('ImageMagick', when='+animation')
depends_on('image-magick', when='+animation')
# --------- Optional dependencies
depends_on('pkg-config', type='build') # why not...

0
var/spack/repos/builtin/packages/py-SQLAlchemy/package.py → var/spack/repos/builtin/packages/py-sqlalchemy/package.py
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2
var/spack/repos/builtin/packages/r-abind/package.py
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@@ -37,7 +37,7 @@ class RAbind(Package):
version('1.4-3', '10fcf80c677b991bf263d38be35a1fc5')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-assertthat/package.py
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@@ -36,7 +36,7 @@ class RAssertthat(Package):
version('0.1', '59f9d7f7c00077ea54d763b78eeb5798')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-base64enc/package.py
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@@ -35,7 +35,7 @@ class RBase64enc(Package):
version('0.1-3', '0f476dacdd11a3e0ad56d13f5bc2f190')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-bh/package.py
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@@ -47,7 +47,7 @@ class RBh(Package):
version('1.60.0-2', 'b50fdc85285da05add4e9da664a2d551')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-BiocGenerics/package.py → var/spack/repos/builtin/packages/r-biocgenerics/package.py
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@@ -36,7 +36,7 @@ class RBiocgenerics(Package):
git='https://github.com/Bioconductor-mirror/BiocGenerics.git',
branch='release-3.2')
extends('R')
extends('r')
def validate(self, spec):
"""

2
var/spack/repos/builtin/packages/r-bitops/package.py
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@@ -35,7 +35,7 @@ class RBitops(Package):
version('1.0-6', 'fba16485a51b1ccd354abde5816b6bdd')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-boot/package.py
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@@ -36,7 +36,7 @@ class RBoot(Package):
version('1.3-18', '711dd58af14e1027eb8377d9202e9b6f')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-brew/package.py
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@@ -36,7 +36,7 @@ class RBrew(Package):
version('1.0-6', '4aaca5e6ec145e0fc0fe6375ce1f3806')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-c50/package.py
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@@ -35,7 +35,7 @@ class RC50(Package):
version('0.1.0-24', '42631e65c5c579532cc6edf5ea175949')
extends('R')
extends('r')
depends_on('r-partykit', type=nolink)

2
var/spack/repos/builtin/packages/r-car/package.py
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@@ -35,7 +35,7 @@ class RCar(Package):
version('2.1-2', '0f78ad74ef7130126d319acec23951a0')
extends('R')
extends('r')
depends_on('r-mass', type=nolink)
depends_on('r-mgcv', type=nolink)

2
var/spack/repos/builtin/packages/r-caret/package.py
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@@ -35,7 +35,7 @@ class RCaret(Package):
version('6.0-70', '202d7abb6a679af716ea69fb2573f108')
extends('R')
extends('r')
depends_on('r-lattice', type=nolink)
depends_on('r-ggplot2', type=nolink)

2
var/spack/repos/builtin/packages/r-catools/package.py
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@@ -38,7 +38,7 @@ class RCatools(Package):
version('1.17.1', '5c872bbc78b177b306f36709deb44498')
extends('R')
extends('r')
depends_on('r-bitops', type=nolink)

2
var/spack/repos/builtin/packages/r-chron/package.py
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@@ -34,7 +34,7 @@ class RChron(Package):
version('2.3-47', 'b8890cdc5f2337f8fd775b0becdcdd1f')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-class/package.py
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@@ -35,7 +35,7 @@ class RClass(Package):
version('7.3-14', '6a21dd206fe4ea29c55faeb65fb2b71e')
extends('R')
extends('r')
depends_on('r-mass', type=nolink)

2
var/spack/repos/builtin/packages/r-cluster/package.py
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@@ -36,7 +36,7 @@ class RCluster(Package):
version('2.0.4', 'bb4deceaafb1c42bb1278d5d0dc11e59')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-codetools/package.py
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@@ -34,7 +34,7 @@ class RCodetools(Package):
version('0.2-14', '7ec41d4f8bd6ba85facc8c5e6adc1f4d')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-colorspace/package.py
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@@ -37,7 +37,7 @@ class RColorspace(Package):
version('1.2-6', 'a30191e9caf66f77ff4e99c062e9dce1')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-crayon/package.py
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@@ -38,7 +38,7 @@ class RCrayon(Package):
version('1.3.2', 'fe29c6204d2d6ff4c2f9d107a03d0cb9')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-cubature/package.py
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@@ -34,7 +34,7 @@ class RCubature(Package):
version('1.1-2', '5617e1d82baa803a3814d92461da45c9')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-curl/package.py
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@@ -43,7 +43,7 @@ class RCurl(Package):
version('1.0', '93d34926d6071e1fba7e728b482f0dd9')
version('0.9.7', 'a101f7de948cb828fef571c730f39217')
extends('R')
extends('r')
depends_on('curl')

2
var/spack/repos/builtin/packages/r-datatable/package.py
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@@ -37,7 +37,7 @@ class RDatatable(Package):
version('1.9.6', 'b1c0c7cce490bdf42ab288541cc55372')
extends('R')
extends('r')
depends_on('r-chron', type='nolink')

2
var/spack/repos/builtin/packages/r-dbi/package.py
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@@ -36,7 +36,7 @@ class RDbi(Package):
version('0.4-1', 'c7ee8f1c5037c2284e99c62698d0f087')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-deoptim/package.py
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@@ -36,7 +36,7 @@ class RDeoptim(Package):
version('2.2-3', 'ed406e6790f8f1568aa9bec159f80326')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-devtools/package.py
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@@ -34,7 +34,7 @@ class RDevtools(Package):
version('1.11.1', '242672ee27d24dddcbdaac88c586b6c2')
extends('R')
extends('r')
depends_on('r-httr', type=nolink)
depends_on('r-memoise', type=nolink)

2
var/spack/repos/builtin/packages/r-diagrammer/package.py
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@@ -34,7 +34,7 @@ class RDiagrammer(Package):
version('0.8.4', '9ee295c744f5d4ba9a84289ca7bdaf1a')
extends('R')
extends('r')
depends_on('r-htmlwidgets', type=nolink)
depends_on('r-igraph', type=nolink)

2
var/spack/repos/builtin/packages/r-dichromat/package.py
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@@ -35,7 +35,7 @@ class RDichromat(Package):
version('2.0-0', '84e194ac95a69763d740947a7ee346a6')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-digest/package.py
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@@ -49,7 +49,7 @@ class RDigest(Package):
version('0.6.9', '48048ce6c466bdb124716e45ba4a0e83')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-doparallel/package.py
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@@ -35,7 +35,7 @@ class RDoparallel(Package):
version('1.0.10', 'd9fbde8f315d98d055483ee3493c9b43')
extends('R')
extends('r')
depends_on('r-foreach', type=nolink)
depends_on('r-iterators', type=nolink)

4
var/spack/repos/builtin/packages/r-dplyr/package.py
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@@ -35,10 +35,10 @@ class RDplyr(Package):
version('0.5.0', '1fcafcacca70806eea2e6d465cdb94ef')
extends('R')
extends('r')
depends_on('r-assertthat', type=nolink)
depends_on('r-R6', type=nolink)
depends_on('r-r6', type=nolink)
depends_on('r-rcpp', type=nolink)
depends_on('r-tibble', type=nolink)
depends_on('r-magrittr', type=nolink)

2
var/spack/repos/builtin/packages/r-dt/package.py
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@@ -36,7 +36,7 @@ class RDt(Package):
version('0.1', '5c8df984921fa484784ec4b8a4fb6f3c')
extends('R')
extends('r')
depends_on('r-htmltools', type=nolink)
depends_on('r-htmlwidgets', type=nolink)

2
var/spack/repos/builtin/packages/r-dygraphs/package.py
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@@ -38,7 +38,7 @@ class RDygraphs(Package):
version('0.9', '7f0ce4312bcd3f0a58b8c03b2772f833')
extends('R')
extends('r')
depends_on('r-magrittr', type=nolink)
depends_on('r-htmlwidgets', type=nolink)

2
var/spack/repos/builtin/packages/r-e1071/package.py
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@@ -36,7 +36,7 @@ class RE1071(Package):
version('1.6-7', 'd109a7e3dd0c905d420e327a9a921f5a')
extends('R')
extends('r')
depends_on('r-class', type=nolink)

2
var/spack/repos/builtin/packages/r-evaluate/package.py
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@@ -37,7 +37,7 @@ class REvaluate(Package):
version('0.9', '877d89ce8a9ef7f403b1089ca1021775')
extends('R')
extends('r')
depends_on('r-stringr', type=nolink)

2
var/spack/repos/builtin/packages/r-filehash/package.py
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@@ -42,7 +42,7 @@ class RFilehash(Package):
version('2.3', '01fffafe09b148ccadc9814c103bdc2f')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-foreach/package.py
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@@ -40,7 +40,7 @@ class RForeach(Package):
version('1.4.3', 'ef45768126661b259f9b8994462c49a0')
extends('R')
extends('r')
depends_on('r-codetools', type=nolink)
depends_on('r-iterators', type=nolink)

2
var/spack/repos/builtin/packages/r-foreign/package.py
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@@ -36,7 +36,7 @@ class RForeign(Package):
version('0.8-66', 'ff12190f4631dca31e30ca786c2c8f62')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-formatr/package.py
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@@ -39,7 +39,7 @@ class RFormatr(Package):
version('1.4', '98b9b64b2785b35f9df403e1aab6c73c')
extends('R')
extends('r')
depends_on('r-codetools', type=nolink)
depends_on('r-shiny', type=nolink)

2
var/spack/repos/builtin/packages/r-formula/package.py
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@@ -36,7 +36,7 @@ class RFormula(Package):
version('1.2-1', '2afb31e637cecd0c1106317aca1e4849')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-gdata/package.py
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@@ -50,7 +50,7 @@ class RGdata(Package):
version('2.17.0', 'c716b663b9dc16ad8cafe6acc781a75f')
extends('R')
extends('r')
depends_on('r-gtools', type=nolink)

2
var/spack/repos/builtin/packages/r-geosphere/package.py
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@@ -36,7 +36,7 @@ class RGeosphere(Package):
version('1.5-5', '28efb7a8e266c7f076cdbcf642455f3e')
extends('R')
extends('r')
depends_on('r-sp', type=nolink)

2
var/spack/repos/builtin/packages/r-ggmap/package.py
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@@ -37,7 +37,7 @@ class RGgmap(Package):
version('2.6.1', '25ad414a3a1c6d59a227a9f22601211a')
extends('R')
extends('r')
depends_on('r-ggplot2', type=nolink)
depends_on('r-proto', type=nolink)

2
var/spack/repos/builtin/packages/r-ggplot2/package.py
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@@ -40,7 +40,7 @@ class RGgplot2(Package):
version('2.1.0', '771928cfb97c649c720423deb3ec7fd3')
extends('R')
extends('r')
depends_on('r-digest', type=nolink)
depends_on('r-gtable', type=nolink)

2
var/spack/repos/builtin/packages/r-ggvis/package.py
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@@ -36,7 +36,7 @@ class RGgvis(Package):
version('0.4.2', '039f45e5c7f1e0652779163d7d99f922')
extends('R')
extends('r')
depends_on('r-assertthat', type=nolink)
depends_on('r-jsonlite', type=nolink)

2
var/spack/repos/builtin/packages/r-gistr/package.py
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@@ -40,7 +40,7 @@ class RGistr(Package):
version('0.3.6', '49d548cb3eca0e66711aece37757a2c0')
extends('R')
extends('r')
depends_on('r-jsonlite', type=nolink)
depends_on('r-httr', type=nolink)

2
var/spack/repos/builtin/packages/r-git2r/package.py
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@@ -36,7 +36,7 @@ class RGit2r(Package):
version('0.15.0', '57658b3298f9b9aadc0dd77b4ef6a1e1')
extends('R')
extends('r')
depends_on('zlib')
depends_on('openssl')

2
var/spack/repos/builtin/packages/r-glmnet/package.py
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@@ -39,7 +39,7 @@ class RGlmnet(Package):
version('2.0-5', '049b18caa29529614cd684db3beaec2a')
extends('R')
extends('r')
depends_on('r-matrix', type=nolink)
depends_on('r-foreach', type=nolink)

2
var/spack/repos/builtin/packages/r-googlevis/package.py
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@@ -38,7 +38,7 @@ class RGooglevis(Package):
version('0.6.0', 'ec36fd2a6884ddc7baa894007d0d0468')
extends('R')
extends('r')
depends_on('r-jsonlite', type=nolink)

2
var/spack/repos/builtin/packages/r-gridbase/package.py
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@@ -34,7 +34,7 @@ class RGridbase(Package):
version('0.4-7', '6d5064a85f5c966a92ee468ae44c5f1f')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-gridextra/package.py
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@@ -35,7 +35,7 @@ class RGridextra(Package):
version('2.2.1', '7076c2122d387c7ef3add69a1c4fc1b2')
extends('R')
extends('r')
depends_on('r-gtable', type=nolink)

2
var/spack/repos/builtin/packages/r-gtable/package.py
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@@ -34,7 +34,7 @@ class RGtable(Package):
version('0.2.0', '124090ae40b2dd3170ae11180e0d4cab')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-gtools/package.py
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@@ -53,7 +53,7 @@ class RGtools(Package):
version('3.5.0', '45f8800c0336d35046641fbacc56bdbb')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-hexbin/package.py
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@@ -36,7 +36,7 @@ class RHexbin(Package):
version('1.27.1', '7f380390c6511e97df10a810a3b3bb7c')
extends('R')
extends('r')
depends_on('r-lattice', type=nolink)

2
var/spack/repos/builtin/packages/r-highr/package.py
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@@ -37,7 +37,7 @@ class RHighr(Package):
version('0.6', 'bf47388c5f57dc61962362fb7e1d8b16')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-htmltools/package.py
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@@ -34,7 +34,7 @@ class RHtmltools(Package):
version('0.3.5', '5f001aff4a39e329f7342dcec5139724')
extends('R')
extends('r')
depends_on('r-digest', type=nolink)
depends_on('r-rcpp', type=nolink)

2
var/spack/repos/builtin/packages/r-htmlwidgets/package.py
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@@ -36,7 +36,7 @@ class RHtmlwidgets(Package):
version('0.6', '7fa522d2eda97593978021bda9670c0e')
extends('R')
extends('r')
depends_on('r-htmltools', type=nolink)
depends_on('r-jsonlite', type=nolink)

2
var/spack/repos/builtin/packages/r-httpuv/package.py
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@@ -40,7 +40,7 @@ class RHttpuv(Package):
version('1.3.3', 'c78ae068cf59e949b9791be987bb4489')
extends('R')
extends('r')
depends_on('r-rcpp', type=nolink)

4
var/spack/repos/builtin/packages/r-httr/package.py
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@@ -36,13 +36,13 @@ class RHttr(Package):
version('1.1.0', '5ffbbc5c2529e49f00aaa521a2b35600')
extends('R')
extends('r')
depends_on('r-jsonlite', type=nolink)
depends_on('r-mime', type=nolink)
depends_on('r-curl', type=nolink)
depends_on('r-openssl', type=nolink)
depends_on('r-R6', type=nolink)
depends_on('r-r6', type=nolink)
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-igraph/package.py
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@@ -36,7 +36,7 @@ class RIgraph(Package):
version('1.0.1', 'ea33495e49adf4a331e4ba60ba559065')
extends('R')
extends('r')
depends_on('r-matrix', type=nolink)
depends_on('r-magrittr', type=nolink)

2
var/spack/repos/builtin/packages/r-influencer/package.py
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@@ -40,7 +40,7 @@ class RInfluencer(Package):
version('0.1.0', '6c8b6decd78c341364b5811fb3050ba5')
extends('R')
extends('r')
depends_on('r-igraph', type=nolink)
depends_on('r-matrix', type=nolink)

2
var/spack/repos/builtin/packages/r-inline/package.py
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@@ -36,7 +36,7 @@ class RInline(Package):
version('0.3.14', '9fe304a6ebf0e3889c4c6a7ad1c50bca')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-irdisplay/package.py
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@@ -36,7 +36,7 @@ class RIrdisplay(Package):
version('0.4.4', '5be672fb82185b90f23bd99ac1e1cdb6')
extends('R')
extends('r')
depends_on('r-repr', type=nolink)

2
var/spack/repos/builtin/packages/r-irkernel/package.py
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@@ -35,7 +35,7 @@ class RIrkernel(Package):
version('master', git='https://github.com/IRkernel/IRkernel.git',
tag='0.7')
extends('R')
extends('r')
depends_on('r-repr', type=nolink)
depends_on('r-irdisplay', type=nolink)

2
var/spack/repos/builtin/packages/r-irlba/package.py
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@@ -36,7 +36,7 @@ class RIrlba(Package):
version('2.0.0', '557674cf8b68fea5b9f231058c324d26')
extends('R')
extends('r')
depends_on('r-matrix', type=nolink)

2
var/spack/repos/builtin/packages/r-iterators/package.py
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@@ -35,7 +35,7 @@ class RIterators(Package):
version('1.0.8', '2ded7f82cddd8174f1ec98607946c6ee')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-jpeg/package.py
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@@ -36,7 +36,7 @@ class RJpeg(Package):
version('0.1-8', '696007451d14395b1ed1d0e9af667a57')
extends('R')
extends('r')
depends_on('jpeg')

2
var/spack/repos/builtin/packages/r-jsonlite/package.py
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@@ -44,7 +44,7 @@ class RJsonlite(Package):
version('1.0', 'c8524e086de22ab39b8ac8000220cc87')
version('0.9.21', '4fc382747f88a79ff0718a0d06bed45d')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-knitr/package.py
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@@ -37,7 +37,7 @@ class RKnitr(Package):
version('1.14', 'ef0fbeaa9372f99ffbc57212a7781511')
version('0.6' , 'c67d6db84cd55594a9e870c90651a3db')
extends('R')
extends('r')
depends_on('r-evaluate', type=nolink)
depends_on('r-digest', type=nolink)

2
var/spack/repos/builtin/packages/r-labeling/package.py
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@@ -34,7 +34,7 @@ class RLabeling(Package):
version('0.3', 'ccd7082ec0b211aba8a89d85176bb534')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-lattice/package.py
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@@ -37,7 +37,7 @@ class RLattice(Package):
version('0.20-34', 'c2a648b22d4206ae7526fb70b8e90fed')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-lazyeval/package.py
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@@ -36,7 +36,7 @@ class RLazyeval(Package):
version('0.2.0', 'df1daac908dcf02ae7e12f4335b1b13b')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-leaflet/package.py
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@@ -36,7 +36,7 @@ class RLeaflet(Package):
version('1.0.1', '7f3d8b17092604d87d4eeb579f73d5df')
extends('R')
extends('r')
depends_on('r-base64enc', type=nolink)
depends_on('r-htmlwidgets', type=nolink)

2
var/spack/repos/builtin/packages/r-lme4/package.py
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@@ -37,7 +37,7 @@ class RLme4(Package):
version('1.1-12', 'da8aaebb67477ecb5631851c46207804')
extends('R')
extends('r')
depends_on('r-matrix', type=nolink)
depends_on('r-mass', type=nolink)

2
var/spack/repos/builtin/packages/r-lmtest/package.py
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@@ -36,7 +36,7 @@ class RLmtest(Package):
version('0.9-34', 'fcdf7286bb5ccc2ca46be00bf25ac2fe')
extends('R')
extends('r')
depends_on('r-zoo', type=nolink)

2
var/spack/repos/builtin/packages/r-lubridate/package.py
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@@ -39,7 +39,7 @@ class RLubridate(Package):
version('1.5.6', 'a5dc44817548ee219d26a10bae92e611')
extends('R')
extends('r')
depends_on('r-stringr', type=nolink)

2
var/spack/repos/builtin/packages/r-magic/package.py
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@@ -37,7 +37,7 @@ class RMagic(Package):
version('1.5-6', 'a68e5ced253b2196af842e1fc84fd029')
extends('R')
extends('r')
depends_on('r-abind', type=nolink)

2
var/spack/repos/builtin/packages/r-magrittr/package.py
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@@ -38,7 +38,7 @@ class RMagrittr(Package):
version('1.5', 'e74ab7329f2b9833f0c3c1216f86d65a')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-mapproj/package.py
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@@ -34,7 +34,7 @@ class RMapproj(Package):
version('1.2-4', '10e22bde1c790e1540672f15ddcaee71')
extends('R')
extends('r')
depends_on('r-maps', type=nolink)

2
var/spack/repos/builtin/packages/r-maps/package.py
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@@ -35,7 +35,7 @@ class RMaps(Package):
version('3.1.1', 'ff045eccb6d5a658db5a539116ddf764')
extends('R')
extends('r')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),

2
var/spack/repos/builtin/packages/r-maptools/package.py
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@@ -38,7 +38,7 @@ class RMaptools(Package):
version('0.8-39', '3690d96afba8ef22c8e27ae540ffb836')
extends('R')
extends('r')
depends_on('r-sp', type=nolink)
depends_on('r-foreign', type=nolink)

2
var/spack/repos/builtin/packages/r-markdown/package.py
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@@ -38,7 +38,7 @@ class RMarkdown(Package):
version('0.7.7', '72deca9c675c7cc9343048edbc29f7ff')
extends('R')
extends('r')
depends_on('r-mime', type=nolink)

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