Standardize package names: lower-case, not Mixed_CASE (#2475)

* Rename packages

* Upcasing depends_on() in packages.

* Downcased extends('r')

* Fixed erroneously changed URL that had slipped through.

* Fixed typo

* Fixed link from documentation into package source code.

* Fixed another doc problem.

* Changed underscores to dashes in package names.

* Added test to enforce lowercase, no-underscore naming convention.

* Fix r-xgboost

* Downcase more instances of 'R' in package auto-creation.

* Fix test.

* Converted unit test packages to use dashes not underscores

* Downcase `r` in the docs.

* Update module_file_support.rst

Fix r->R for class R.

var/spack/repos/builtin/packages/r-jsonlite/package.py

@@ -44,7 +44,7 @@ class RJsonlite(Package):
     version('1.0', 'c8524e086de22ab39b8ac8000220cc87')
     version('0.9.21', '4fc382747f88a79ff0718a0d06bed45d')
 
-    extends('R')
+    extends('r')
 
     def install(self, spec, prefix):
         R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),