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Add top-level attributes for git R-Z packages

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This commit is contained in:
Adam J. Stewart 2018-07-24 20:52:35 -05:00 committed by Todd Gamblin
parent a1572bb999
commit 3f18c04865
71 changed files with 210 additions and 200 deletions
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5
var/spack/repos/builtin/packages/raft/package.py
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@ -31,10 +31,11 @@ class Raft(CMakePackage):
Toolbox under development at Brazilian Synchrotron Light Source.""" Toolbox under development at Brazilian Synchrotron Light Source."""
homepage = "https://bitbucket.org/gill_martinez/raft_aps" homepage = "https://bitbucket.org/gill_martinez/raft_aps"
url = "https://bitbucket.org/gill_martinez/raft_aps/get/1.2.3.tar.gz" url = "https://bitbucket.org/gill_martinez/raft_aps/get/1.2.3.tar.gz"
git = "https://bitbucket.org/gill_martinez/raft_aps.git"
version('develop', git=git)
version('1.2.3', '4d1b106d9b3493e63dde96f7dd44b834') version('1.2.3', '4d1b106d9b3493e63dde96f7dd44b834')
version('develop', git='https://bitbucket.org/gill_martinez/raft_aps.git')
depends_on('mpi') depends_on('mpi')
depends_on('cmake', type='build') depends_on('cmake', type='build')

20
var/spack/repos/builtin/packages/raja/package.py
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@ -27,16 +27,18 @@
class Raja(CMakePackage): class Raja(CMakePackage):
"""RAJA Parallel Framework.""" """RAJA Parallel Framework."""
homepage = "http://software.llnl.gov/RAJA/"
version('master', git='https://github.com/LLNL/RAJA.git', branch='master', submodules='True') homepage = "http://software.llnl.gov/RAJA/"
version('develop', git='https://github.com/LLNL/RAJA.git', branch='develop', submodules='True') git = "https://github.com/LLNL/RAJA.git"
version('0.5.3', git='https://github.com/LLNL/RAJA.git', tag='v0.5.3', submodules="True")
version('0.5.2', git='https://github.com/LLNL/RAJA.git', tag='v0.5.2', submodules="True") version('develop', branch='develop', submodules='True')
version('0.5.1', git='https://github.com/LLNL/RAJA.git', tag='v0.5.1', submodules="True") version('master', branch='master', submodules='True')
version('0.5.0', git='https://github.com/LLNL/RAJA.git', tag='v0.5.0', submodules="True") version('0.5.3', tag='v0.5.3', submodules="True")
version('0.4.1', git='https://github.com/LLNL/RAJA.git', tag='v0.4.1', submodules="True") version('0.5.2', tag='v0.5.2', submodules="True")
version('0.4.0', git='https://github.com/LLNL/RAJA.git', tag='v0.4.0', submodules="True") version('0.5.1', tag='v0.5.1', submodules="True")
version('0.5.0', tag='v0.5.0', submodules="True")
version('0.4.1', tag='v0.4.1', submodules="True")
version('0.4.0', tag='v0.4.0', submodules="True")
variant('cuda', default=False, description='Build with CUDA backend') variant('cuda', default=False, description='Build with CUDA backend')
variant('openmp', default=True, description='Build OpenMP backend') variant('openmp', default=True, description='Build OpenMP backend')

7
var/spack/repos/builtin/packages/rankstr/package.py
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@ -30,11 +30,12 @@ class Rankstr(CMakePackage):
homepage = "https://github.com/ECP-VeloC/rankstr" homepage = "https://github.com/ECP-VeloC/rankstr"
url = "https://github.com/ECP-VeloC/rankstr/archive/v0.0.1.zip" url = "https://github.com/ECP-VeloC/rankstr/archive/v0.0.1.zip"
tags = ['ecp'] git = "https://github.com/ecp-veloc/rankstr.git"
tags = ['ecp']
version('master', branch='master')
version('0.0.1', 'abe06fa6a78cfe20ec0c78717ac2f2ed') version('0.0.1', 'abe06fa6a78cfe20ec0c78717ac2f2ed')
version('master', git='https://github.com/ecp-veloc/rankstr.git',
branch='master')
depends_on('mpi') depends_on('mpi')

3
var/spack/repos/builtin/packages/readfq/package.py
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@ -31,8 +31,9 @@ class Readfq(Package):
interface.""" interface."""
homepage = "https://github.com/lh3/readfq" homepage = "https://github.com/lh3/readfq"
git = "https://github.com/lh3/readfq.git"
version('2013.04.10', git='https://github.com/lh3/readfq.git', commit='4fb766095d8f459e0f8025be70f9173673905d12') version('2013.04.10', commit='4fb766095d8f459e0f8025be70f9173673905d12')
def install(self, spec, prefix): def install(self, spec, prefix):
install_tree('.', prefix.bin) install_tree('.', prefix.bin)

7
var/spack/repos/builtin/packages/redset/package.py
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@ -30,11 +30,12 @@ class Redset(CMakePackage):
homepage = "https://github.com/ECP-VeloC/redset" homepage = "https://github.com/ECP-VeloC/redset"
url = "https://github.com/ECP-VeloC/redset/archive/v0.0.1.zip" url = "https://github.com/ECP-VeloC/redset/archive/v0.0.1.zip"
tags = ['ecp'] git = "https://github.com/ecp-veloc/redset.git"
tags = ['ecp']
version('master', branch='master')
version('0.0.2', '370d4dd477ebcfdd28dcc6375c22f731') version('0.0.2', '370d4dd477ebcfdd28dcc6375c22f731')
version('master', git='https://github.com/ecp-veloc/redset.git',
branch='master')
depends_on('mpi') depends_on('mpi')
depends_on('rankstr') depends_on('rankstr')

8
var/spack/repos/builtin/packages/relion/package.py
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@ -32,11 +32,11 @@ class Relion(CMakePackage, CudaPackage):
electron cryo-microscopy (cryo-EM).""" electron cryo-microscopy (cryo-EM)."""
homepage = "http://http://www2.mrc-lmb.cam.ac.uk/relion" homepage = "http://http://www2.mrc-lmb.cam.ac.uk/relion"
url = "https://github.com/3dem/relion" git = "https://github.com/3dem/relion.git"
version('2.1', git='https://github.com/3dem/relion.git', tag='2.1') version('develop')
version('2.0.3', git='https://github.com/3dem/relion.git', tag='2.0.3') version('2.1', tag='2.1')
version('develop', git='https://github.com/3dem/relion.git') version('2.0.3', tag='2.0.3')
variant('gui', default=True, description="build the gui") variant('gui', default=True, description="build the gui")
variant('cuda', default=True, description="enable compute on gpu") variant('cuda', default=True, description="enable compute on gpu")

9
var/spack/repos/builtin/packages/rmlab/package.py
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@ -26,15 +26,14 @@
class Rmlab(CMakePackage): class Rmlab(CMakePackage):
"""C++ File API for the reMarkable tablet """C++ File API for the reMarkable tablet"""
"""
homepage = "https://github.com/ax3l/lines-are-beautiful" homepage = "https://github.com/ax3l/lines-are-beautiful"
url = "https://plasma.ninja/blog/devices/remarkable/binary/format/2017/12/26/reMarkable-lines-file-format.html" git = "https://github.com/ax3l/lines-are-beautiful.git"
maintainers = ['ax3l'] maintainers = ['ax3l']
version('develop', branch='develop', version('develop', branch='develop')
git='https://github.com/ax3l/lines-are-beautiful.git')
variant('png', default=True, variant('png', default=True,
description='Enable PNG conversion support') description='Enable PNG conversion support')

6
var/spack/repos/builtin/packages/rose/package.py
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@ -35,11 +35,11 @@ class Rose(Package):
(Developed at Lawrence Livermore National Lab)""" (Developed at Lawrence Livermore National Lab)"""
homepage = "http://rosecompiler.org/" homepage = "http://rosecompiler.org/"
url = "https://github.com/rose-compiler/rose/archive/v0.9.7.tar.gz" url = "https://github.com/rose-compiler/rose/archive/v0.9.7.tar.gz"
git = "https://github.com/rose-compiler/rose.git"
version('master', branch='master')
version('0.9.7', 'e14ce5250078df4b09f4f40559d46c75') version('0.9.7', 'e14ce5250078df4b09f4f40559d46c75')
version('master', branch='master',
git='https://github.com/rose-compiler/rose.git')
patch('add_spack_compiler_recognition.patch') patch('add_spack_compiler_recognition.patch')

7
var/spack/repos/builtin/packages/rust/package.py
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@ -33,10 +33,11 @@ def get_submodules():
class Rust(Package): class Rust(Package):
"""The rust programming language toolchain""" """The rust programming language toolchain"""
homepage = "http://www.rust-lang.org"
url = "https://github.com/rust-lang/rust"
version('1.8.0', tag='1.8.0', git="https://github.com/rust-lang/rust") homepage = "http://www.rust-lang.org"
git = "https://github.com/rust-lang/rust.git"
version('1.8.0', tag='1.8.0')
resource(name='cargo', resource(name='cargo',
git="https://github.com/rust-lang/cargo.git", git="https://github.com/rust-lang/cargo.git",

4
var/spack/repos/builtin/packages/sabre/package.py
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@ -37,9 +37,9 @@ class Sabre(MakefilePackage):
""" """
homepage = "https://github.com/najoshi/sabre" homepage = "https://github.com/najoshi/sabre"
url = "https://github.com/najoshi/sabre" git = "https://github.com/najoshi/sabre.git"
version('2013-09-27', git='https://github.com/najoshi/sabre.git', commit='039a55e500ba07b7e6432ea6ec2ddcfb3471d949') version('2013-09-27', commit='039a55e500ba07b7e6432ea6ec2ddcfb3471d949')
depends_on('zlib') depends_on('zlib')

4
var/spack/repos/builtin/packages/sambamba/package.py
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@ -29,9 +29,9 @@ class Sambamba(Package):
"""Sambamba: process your BAM data faster (bioinformatics)""" """Sambamba: process your BAM data faster (bioinformatics)"""
homepage = "http://lomereiter.github.io/sambamba/" homepage = "http://lomereiter.github.io/sambamba/"
git = "https://github.com/lomereiter/sambamba.git"
version('0.6.6', git='https://github.com/lomereiter/sambamba.git', version('0.6.6', tag='v0.6.6', submodules=True)
tag='v0.6.6', submodules=True)
depends_on('ldc~shared', type=('build', 'link')) depends_on('ldc~shared', type=('build', 'link'))
depends_on('python', type='build') depends_on('python', type='build')

4
var/spack/repos/builtin/packages/satsuma2/package.py
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@ -33,9 +33,9 @@ class Satsuma2(CMakePackage):
""" """
homepage = "https://github.com/bioinfologics/satsuma2" homepage = "https://github.com/bioinfologics/satsuma2"
url = "https://github.com/bioinfologics/satsuma2" git = "https://github.com/bioinfologics/satsuma2.git"
version('2016-11-22', git='https://github.com/bioinfologics/satsuma2.git', commit='da694aeecf352e344b790bea4a7aaa529f5b69e6') version('2016-11-22', commit='da694aeecf352e344b790bea4a7aaa529f5b69e6')
def install(self, spec, prefix): def install(self, spec, prefix):
install_tree(join_path('spack-build', 'bin'), prefix.bin) install_tree(join_path('spack-build', 'bin'), prefix.bin)

8
var/spack/repos/builtin/packages/savanna/package.py
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@ -32,12 +32,10 @@ class Savanna(MakefilePackage):
""" """
homepage = "https://github.com/CODARcode/savanna" homepage = "https://github.com/CODARcode/savanna"
url = "https://github.com/CODARcode/savanna/archive/v0.5.tar.gz" git = "https://github.com/CODARcode/savanna.git"
version('develop', git='https://github.com/CODARcode/savanna.git', version('develop', branch='master', submodules=True)
branch='master', submodules=True) version('0.5', tag='0.5', submodules=True)
version('0.5', git='https://github.com/CODARcode/savanna.git',
tag='0.5', submodules=True)
variant('tau', default=False, description='Enable TAU profiling support') variant('tau', default=False, description='Enable TAU profiling support')

8
var/spack/repos/builtin/packages/saws/package.py
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@ -30,7 +30,9 @@ class Saws(AutotoolsPackage):
scientific or engineering application code into a webserver, scientific or engineering application code into a webserver,
allowing one to examine (and even modify) the state of the allowing one to examine (and even modify) the state of the
simulation with any browser from anywhere.""" simulation with any browser from anywhere."""
homepage = "https://bitbucket.org/saws/saws/wiki/Home"
version('develop', git='https://bitbucket.org/saws/saws.git', tag='master') homepage = "https://bitbucket.org/saws/saws/wiki/Home"
version('0.1.0', git='https://bitbucket.org/saws/saws.git', tag='v0.1.0') git = "https://bitbucket.org/saws/saws.git"
version('develop', tag='master')
version('0.1.0', tag='v0.1.0')

4
var/spack/repos/builtin/packages/scorec-core/package.py
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@ -31,9 +31,9 @@ class ScorecCore(CMakePackage):
""" """
homepage = 'https://www.scorec.rpi.edu/' homepage = 'https://www.scorec.rpi.edu/'
url = 'https://github.com/SCOREC/core.git' git = 'https://github.com/SCOREC/core.git'
version('develop', git=url) version('develop')
depends_on('mpi') depends_on('mpi')
depends_on('zoltan') depends_on('zoltan')

5
var/spack/repos/builtin/packages/scr/package.py
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@ -34,15 +34,16 @@ class Scr(CMakePackage):
capability for MPI codes""" capability for MPI codes"""
homepage = "http://computation.llnl.gov/projects/scalable-checkpoint-restart-for-mpi" homepage = "http://computation.llnl.gov/projects/scalable-checkpoint-restart-for-mpi"
url = "https://github.com/LLNL/scr/archive/v1.2.0.tar.gz"
git = "https://github.com/llnl/scr.git"
# NOTE: scr-v1.1.8 is built with autotools and is not properly build here. # NOTE: scr-v1.1.8 is built with autotools and is not properly build here.
# scr-v1.1.8 will be deprecated with the upcoming release of v1.2.0 # scr-v1.1.8 will be deprecated with the upcoming release of v1.2.0
# url = "https://github.com/LLNL/scr/releases/download/v1.1.8/scr-1.1.8.tar.gz" # url = "https://github.com/LLNL/scr/releases/download/v1.1.8/scr-1.1.8.tar.gz"
# version('1.1.8', '6a0f11ad18e27fcfc00a271ff587b06e') # version('1.1.8', '6a0f11ad18e27fcfc00a271ff587b06e')
url = "https://github.com/LLNL/scr/archive/v1.2.0.tar.gz" version('master', branch='master')
version('1.2.0', '060e9e9c7604c1765f3991f9cd6e9d2d') version('1.2.0', '060e9e9c7604c1765f3991f9cd6e9d2d')
version('master', git='https://github.com/llnl/scr.git', branch='master')
depends_on('pdsh+static_modules', type=('build', 'run')) depends_on('pdsh+static_modules', type=('build', 'run'))
depends_on('zlib') depends_on('zlib')

7
var/spack/repos/builtin/packages/shuffile/package.py
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@ -30,11 +30,12 @@ class Shuffile(CMakePackage):
homepage = "https://github.com/ECP-VeloC/shuffile" homepage = "https://github.com/ECP-VeloC/shuffile"
url = "https://github.com/ECP-VeloC/shuffile/archive/v0.0.1.zip" url = "https://github.com/ECP-VeloC/shuffile/archive/v0.0.1.zip"
tags = ['ecp'] git = "https://github.com/ecp-veloc/shuffile.git"
tags = ['ecp']
version('master', branch='master')
version('0.0.2', 'eca45150d83e21ac51049133a2308d34') version('0.0.2', 'eca45150d83e21ac51049133a2308d34')
version('master', git='https://github.com/ecp-veloc/shuffile.git',
branch='master')
depends_on('mpi') depends_on('mpi')
depends_on('kvtree') depends_on('kvtree')

5
var/spack/repos/builtin/packages/simulationio/package.py
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@ -28,13 +28,14 @@
class Simulationio(CMakePackage): class Simulationio(CMakePackage):
"""SimulationIO: Efficient and convenient I/O for large PDE simulations""" """SimulationIO: Efficient and convenient I/O for large PDE simulations"""
homepage = "https://github.com/eschnett/SimulationIO" homepage = "https://github.com/eschnett/SimulationIO"
url = "https://github.com/eschnett/SimulationIO/archive/version/0.1.0.tar.gz" url = "https://github.com/eschnett/SimulationIO/archive/version/0.1.0.tar.gz"
git = "https://github.com/eschnett/SimulationIO.git"
version('develop', branch='master')
version('1.0.0', '5cbf1d0084eb436d861ffcdd297eaa08') version('1.0.0', '5cbf1d0084eb436d861ffcdd297eaa08')
version('0.1.0', '00f7dabc08ed1ab77858785ce0809f50') version('0.1.0', '00f7dabc08ed1ab77858785ce0809f50')
version('develop',
git='https://github.com/eschnett/SimulationIO.git', branch='master')
variant('julia', default=False) variant('julia', default=False)
variant('python', default=True) variant('python', default=True)

3
var/spack/repos/builtin/packages/singularity/package.py
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@ -31,11 +31,12 @@ class Singularity(AutotoolsPackage):
homepage = "https://www.sylabs.io/singularity/" homepage = "https://www.sylabs.io/singularity/"
url = "https://github.com/singularityware/singularity/releases/download/2.5.2/singularity-2.5.2.tar.gz" url = "https://github.com/singularityware/singularity/releases/download/2.5.2/singularity-2.5.2.tar.gz"
git = "https://github.com/singularityware/singularity.git"
# Versions before 2.5.2 suffer from a serious security problem. # Versions before 2.5.2 suffer from a serious security problem.
# https://nvd.nist.gov/vuln/detail/CVE-2018-12021 # https://nvd.nist.gov/vuln/detail/CVE-2018-12021
version('develop', branch='master')
version('2.5.2', '2edc1a8ac9a4d7d26fba6244f1c5fd95') version('2.5.2', '2edc1a8ac9a4d7d26fba6244f1c5fd95')
version('develop', git='https://github.com/singularityware/singularity.git', branch='master')
depends_on('libarchive', when='@2.5.2:') depends_on('libarchive', when='@2.5.2:')
# these are only needed if we're grabbing the unreleased tree # these are only needed if we're grabbing the unreleased tree

9
var/spack/repos/builtin/packages/slepc/package.py
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@ -27,13 +27,13 @@
class Slepc(Package): class Slepc(Package):
""" """Scalable Library for Eigenvalue Problem Computations."""
Scalable Library for Eigenvalue Problem Computations.
"""
homepage = "http://www.grycap.upv.es/slepc" homepage = "http://www.grycap.upv.es/slepc"
url = "http://slepc.upv.es/download/distrib/slepc-3.6.2.tar.gz" url = "http://slepc.upv.es/download/distrib/slepc-3.6.2.tar.gz"
git = "https://bitbucket.org/slepc/slepc.git"
version('develop', git=git)
version('3.9.1', 'e174ea7c127d9161eef976b0288f0c56d443a58d6ab2dc8af1e8bd66f156ce17') version('3.9.1', 'e174ea7c127d9161eef976b0288f0c56d443a58d6ab2dc8af1e8bd66f156ce17')
version('3.9.0', '1f3930db56b4065aaf214ea758ddff1a70bf19d45544cbdfd19d2787db4bfe0b') version('3.9.0', '1f3930db56b4065aaf214ea758ddff1a70bf19d45544cbdfd19d2787db4bfe0b')
version('3.8.2', '1e7d20d20eb26da307d36017461fe4a55f40e947e232739179dbe6412e22ed13') version('3.8.2', '1e7d20d20eb26da307d36017461fe4a55f40e947e232739179dbe6412e22ed13')
@ -43,7 +43,6 @@ class Slepc(Package):
version('3.7.1', '670216f263e3074b21e0623c01bc0f562fdc0bffcd7bd42dd5d8edbe73a532c2') version('3.7.1', '670216f263e3074b21e0623c01bc0f562fdc0bffcd7bd42dd5d8edbe73a532c2')
version('3.6.3', '384939d009546db37bc05ed81260c8b5ba451093bf891391d32eb7109ccff876') version('3.6.3', '384939d009546db37bc05ed81260c8b5ba451093bf891391d32eb7109ccff876')
version('3.6.2', '2ab4311bed26ccf7771818665991b2ea3a9b15f97e29fd13911ab1293e8e65df') version('3.6.2', '2ab4311bed26ccf7771818665991b2ea3a9b15f97e29fd13911ab1293e8e65df')
version('develop', git='https://bitbucket.org/slepc/slepc.git')
variant('arpack', default=True, description='Enables Arpack wrappers') variant('arpack', default=True, description='Enables Arpack wrappers')

7
var/spack/repos/builtin/packages/snap/package.py
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@ -34,10 +34,11 @@ class Snap(MakefilePackage):
It is modeled off the Los Alamos National Laboratory code PARTISN.""" It is modeled off the Los Alamos National Laboratory code PARTISN."""
homepage = "https://github.com/lanl/SNAP" homepage = "https://github.com/lanl/SNAP"
url = "" git = "https://github.com/lanl/SNAP.git"
tags = ['proxy-app']
version('master', git='https://github.com/lanl/SNAP.git') tags = ['proxy-app']
version('master')
variant('openmp', default=False, description='Build with OpenMP support') variant('openmp', default=False, description='Build with OpenMP support')
variant('opt', default=True, description='Build with debugging') variant('opt', default=True, description='Build with debugging')

4
var/spack/repos/builtin/packages/snbone/package.py
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@ -31,9 +31,9 @@ class Snbone(MakefilePackage):
continuous finite element based transport equation solver.""" continuous finite element based transport equation solver."""
homepage = "https://github.com/ANL-CESAR/" homepage = "https://github.com/ANL-CESAR/"
url = "https://github.com/ANL-CESAR/SNbone.git" git = "https://github.com/ANL-CESAR/SNbone.git"
version('develop', git='https://github.com/ANL-CESAR/SNbone.git') version('develop')
tags = ['proxy-app'] tags = ['proxy-app']

4
var/spack/repos/builtin/packages/sortmerna/package.py
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@ -30,9 +30,9 @@ class Sortmerna(CMakePackage):
reads in metatranscriptomic and metagenomic data""" reads in metatranscriptomic and metagenomic data"""
homepage = "https://github.com/biocore/sortmerna" homepage = "https://github.com/biocore/sortmerna"
url = "https://github.com/biocore/sortmerna" git = "https://github.com/biocore/sortmerna.git"
version('2017-07-13', git='https://github.com/biocore/sortmerna.git', commit='8bde6fa113a5d99a23ae81b48eeea6760e966094') version('2017-07-13', commit='8bde6fa113a5d99a23ae81b48eeea6760e966094')
depends_on('zlib') depends_on('zlib')

4
var/spack/repos/builtin/packages/sosflow/package.py
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@ -31,9 +31,9 @@ class Sosflow(CMakePackage):
observation, introspection, feedback, and control of HPC applications.""" observation, introspection, feedback, and control of HPC applications."""
homepage = "https://github.com/cdwdirect/sos_flow/wiki" homepage = "https://github.com/cdwdirect/sos_flow/wiki"
url = "https://github.com/cdwdirect/sos_flow.git" git = "https://github.com/cdwdirect/sos_flow.git"
version('spack', git='https://github.com/cdwdirect/sos_flow.git', tag='spack-build-v0.9901') version('spack', tag='spack-build-v0.9901')
depends_on('libevpath') depends_on('libevpath')
depends_on('sqlite@3:') depends_on('sqlite@3:')

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var/spack/repos/builtin/packages/sst-dumpi/package.py
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@ -39,14 +39,12 @@ class SstDumpi(AutotoolsPackage):
homepage = "http://sst.sandia.gov/about_dumpi.html" homepage = "http://sst.sandia.gov/about_dumpi.html"
url = "https://github.com/sstsimulator/sst-dumpi/archive/6.1.0.tar.gz" url = "https://github.com/sstsimulator/sst-dumpi/archive/6.1.0.tar.gz"
git = "https://github.com/sstsimulator/sst-dumpi.git"
version('master', branch='master')
version('6.1.0', '31c3f40a697dc85bf23dd34270982319')
depends_on('autoconf@1.68:', type='build') depends_on('autoconf@1.68:', type='build')
depends_on('automake@1.11.1:', type='build') depends_on('automake@1.11.1:', type='build')
depends_on('libtool@1.2.4:', type='build') depends_on('libtool@1.2.4:', type='build')
depends_on('m4', type='build') depends_on('m4', type='build')
version('master',
git='https://github.com/sstsimulator/sst-dumpi.git',
branch='master')
version('6.1.0', '31c3f40a697dc85bf23dd34270982319')

11
var/spack/repos/builtin/packages/sst-macro/package.py
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@ -40,6 +40,10 @@ class SstMacro(AutotoolsPackage):
homepage = "http://sst.sandia.gov/about_sstmacro.html" homepage = "http://sst.sandia.gov/about_sstmacro.html"
url = "https://github.com/sstsimulator/sst-macro/releases/download/v6.1.0_Final/sstmacro-6.1.0.tar.gz" url = "https://github.com/sstsimulator/sst-macro/releases/download/v6.1.0_Final/sstmacro-6.1.0.tar.gz"
git = "https://github.com/sstsimulator/sst-macro.git"
version('master', branch='master')
version('6.1.0', '98b737be6326b8bd711de832ccd94d14')
depends_on('boost@1.59:') depends_on('boost@1.59:')
depends_on('autoconf@1.68:', type='build', when='@master') depends_on('autoconf@1.68:', type='build', when='@master')
@ -47,13 +51,6 @@ class SstMacro(AutotoolsPackage):
depends_on('libtool@1.2.4:', type='build', when='@master') depends_on('libtool@1.2.4:', type='build', when='@master')
depends_on('m4', type='build', when='@master') depends_on('m4', type='build', when='@master')
version('master',
git='https://github.com/sstsimulator/sst-macro.git',
branch='master')
version('6.1.0', '98b737be6326b8bd711de832ccd94d14',
url='https://github.com/sstsimulator/sst-macro/releases/download/v6.1.0_Final/sstmacro-6.1.0.tar.gz')
@run_before('autoreconf') @run_before('autoreconf')
def bootstrap(self): def bootstrap(self):
if '@master' in self.spec: if '@master' in self.spec:

3
var/spack/repos/builtin/packages/stream/package.py
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@ -31,8 +31,9 @@ class Stream(MakefilePackage):
computation rate for simple vector kernels.""" computation rate for simple vector kernels."""
homepage = "https://www.cs.virginia.edu/stream/ref.html" homepage = "https://www.cs.virginia.edu/stream/ref.html"
git = "https://github.com/jeffhammond/STREAM.git"
version('5.10', git='https://github.com/jeffhammond/STREAM.git') version('5.10')
variant('openmp', default=False, description='Build with OpenMP support') variant('openmp', default=False, description='Build with OpenMP support')

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var/spack/repos/builtin/packages/superlu-dist/package.py
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@ -30,11 +30,13 @@
class SuperluDist(Package): class SuperluDist(Package):
"""A general purpose library for the direct solution of large, sparse, """A general purpose library for the direct solution of large, sparse,
nonsymmetric systems of linear equations on high performance machines.""" nonsymmetric systems of linear equations on high performance machines."""
homepage = "http://crd-legacy.lbl.gov/~xiaoye/SuperLU/"
url = "http://crd-legacy.lbl.gov/~xiaoye/SuperLU/superlu_dist_4.1.tar.gz"
version('develop', git='https://github.com/xiaoyeli/superlu_dist', branch='master') homepage = "http://crd-legacy.lbl.gov/~xiaoye/SuperLU/"
version('xsdk-0.2.0', git='https://github.com/xiaoyeli/superlu_dist', tag='xsdk-0.2.0') url = "http://crd-legacy.lbl.gov/~xiaoye/SuperLU/superlu_dist_4.1.tar.gz"
git = "https://github.com/xiaoyeli/superlu_dist.git"
version('develop', branch='master')
version('xsdk-0.2.0', tag='xsdk-0.2.0')
version('5.4.0', 'e64645c5be352ae2c88327af2cac66e1') version('5.4.0', 'e64645c5be352ae2c88327af2cac66e1')
version('5.3.0', '35d5aa8e0a246efaf327988b20106714') version('5.3.0', '35d5aa8e0a246efaf327988b20106714')
version('5.2.2', 'a685ef7fb7859b24c8c9d5d5f121a8a5') version('5.2.2', 'a685ef7fb7859b24c8c9d5d5f121a8a5')

4
var/spack/repos/builtin/packages/sw4lite/package.py
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@ -34,9 +34,9 @@ class Sw4lite(MakefilePackage):
homepage = "https://geodynamics.org/cig/software/sw4" homepage = "https://geodynamics.org/cig/software/sw4"
url = "https://github.com/geodynamics/sw4lite/archive/v1.0.zip" url = "https://github.com/geodynamics/sw4lite/archive/v1.0.zip"
git = "https://github.com/geodynamics/sw4lite"
version('develop', git='https://github.com/geodynamics/sw4lite', version('develop', branch='master')
branch='master')
version('1.0', '3d911165f4f2ff6d5f9c1bd56ab6723f') version('1.0', '3d911165f4f2ff6d5f9c1bd56ab6723f')
variant('openmp', default=True, description='Build with OpenMP support') variant('openmp', default=True, description='Build with OpenMP support')

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var/spack/repos/builtin/packages/swfft/package.py
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@ -30,12 +30,12 @@ class Swfft(MakefilePackage):
"""A stand-alone version of HACC's distributed-memory, pencil-decomposed, """A stand-alone version of HACC's distributed-memory, pencil-decomposed,
parallel 3D FFT.""" parallel 3D FFT."""
homepage = 'https://xgitlab.cels.anl.gov/hacc/SWFFT' homepage = "https://xgitlab.cels.anl.gov/hacc/SWFFT"
url = "https://xgitlab.cels.anl.gov/api/v4/projects/hacc%2FSWFFT/repository/archive.tar.gz?sha=v1.0" url = "https://xgitlab.cels.anl.gov/api/v4/projects/hacc%2FSWFFT/repository/archive.tar.gz?sha=v1.0"
git = "https://xgitlab.cels.anl.gov/hacc/SWFFT"
version('1.0', '0fbc34544b97ba9c3fb19ef2d7a0f076') version('1.0', '0fbc34544b97ba9c3fb19ef2d7a0f076')
version('develop', git='https://xgitlab.cels.anl.gov/hacc/SWFFT', version('develop', branch='master')
branch='master')
depends_on('mpi') depends_on('mpi')
depends_on('fftw') depends_on('fftw')

3
var/spack/repos/builtin/packages/symengine/package.py
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@ -31,11 +31,12 @@ class Symengine(CMakePackage):
homepage = "https://github.com/symengine/symengine" homepage = "https://github.com/symengine/symengine"
url = "https://github.com/symengine/symengine/archive/v0.2.0.tar.gz" url = "https://github.com/symengine/symengine/archive/v0.2.0.tar.gz"
git = "https://github.com/symengine/symengine.git"
version('develop', git=git)
version('0.3.0', 'e61d7513cca4963cd062616891de54c6') version('0.3.0', 'e61d7513cca4963cd062616891de54c6')
version('0.2.0', '45401561add36a13c1f0b0c5f8d7422d') version('0.2.0', '45401561add36a13c1f0b0c5f8d7422d')
version('0.1.0', '41ad7daed61fc5a77c285eb6c7303425') version('0.1.0', '41ad7daed61fc5a77c285eb6c7303425')
version('develop', git='https://github.com/symengine/symengine.git')
variant('boostmp', default=False, variant('boostmp', default=False,
description='Compile with Boost multi-precision integer library') description='Compile with Boost multi-precision integer library')

4
var/spack/repos/builtin/packages/sz/package.py
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@ -31,9 +31,9 @@ class Sz(AutotoolsPackage):
homepage = "https://collab.cels.anl.gov/display/ESR/SZ" homepage = "https://collab.cels.anl.gov/display/ESR/SZ"
url = "https://github.com/disheng222/SZ/archive/v1.4.13.5.tar.gz" url = "https://github.com/disheng222/SZ/archive/v1.4.13.5.tar.gz"
git = "https://github.com/disheng222/SZ.git"
version('develop', git='https://github.com/disheng222/SZ.git', version('develop', branch='master')
branch='master')
version('1.4.13.5', 'a2f6147c3c74d74c938dd17d914a4cb8') version('1.4.13.5', 'a2f6147c3c74d74c938dd17d914a4cb8')
version('1.4.13.4', '1c47170a9eebeadbf0f7e9b675d68d76') version('1.4.13.4', '1c47170a9eebeadbf0f7e9b675d68d76')
version('1.4.12.3', '5f51be8530cdfa5280febb410ac6dd94') version('1.4.12.3', '5f51be8530cdfa5280febb410ac6dd94')

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var/spack/repos/builtin/packages/tabix/package.py
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@ -29,9 +29,9 @@ class Tabix(MakefilePackage):
"""Generic indexer for TAB-delimited genome position files""" """Generic indexer for TAB-delimited genome position files"""
homepage = "https://github.com/samtools/tabix" homepage = "https://github.com/samtools/tabix"
url = "https://github.com/samtools/tabix" git = "https://github.com/samtools/tabix.git"
version('2013-12-16', git='https://github.com/samtools/tabix.git', commit='1ae158ac79b459f5feeed7490c67519b14ce9f35') version('2013-12-16', commit='1ae158ac79b459f5feeed7490c67519b14ce9f35')
depends_on('perl', type=('build', 'run')) depends_on('perl', type=('build', 'run'))
depends_on('python', type=('build', 'run')) depends_on('python', type=('build', 'run'))

5
var/spack/repos/builtin/packages/tassel/package.py
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@ -30,10 +30,9 @@ class Tassel(Package):
evolutionary patterns, and linkage disequilibrium.""" evolutionary patterns, and linkage disequilibrium."""
homepage = "http://www.maizegenetics.net/tassel" homepage = "http://www.maizegenetics.net/tassel"
url = "https://bitbucket.org/tasseladmin/tassel-5-source/get/master.tar.gz" git = "https://bitbucket.org/tasseladmin/tassel-5-standalone.git"
version('2017-07-22', git='https://bitbucket.org/tasseladmin/tassel-5-standalone.git', version('2017-07-22', commit='ae96ae75c3c9a9e8026140b6c775fa4685bdf531')
commit='ae96ae75c3c9a9e8026140b6c775fa4685bdf531')
depends_on('java', type=('build', 'run')) depends_on('java', type=('build', 'run'))
depends_on('perl', type=('build', 'run')) depends_on('perl', type=('build', 'run'))

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var/spack/repos/builtin/packages/tcoffee/package.py
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@ -29,9 +29,9 @@ class Tcoffee(MakefilePackage):
"""T-Coffee is a multiple sequence alignment program.""" """T-Coffee is a multiple sequence alignment program."""
homepage = "http://www.tcoffee.org/" homepage = "http://www.tcoffee.org/"
url = "https://github.com/cbcrg/tcoffee" git = "https://github.com/cbcrg/tcoffee.git"
version('2017-08-17', git='https://github.com/cbcrg/tcoffee.git', commit='f389b558e91d0f82e7db934d9a79ce285f853a71') version('2017-08-17', commit='f389b558e91d0f82e7db934d9a79ce285f853a71')
depends_on('perl', type=('build', 'run')) depends_on('perl', type=('build', 'run'))
depends_on('blast-plus') depends_on('blast-plus')

3
var/spack/repos/builtin/packages/tethex/package.py
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@ -34,11 +34,12 @@ class Tethex(CMakePackage):
homepage = "https://github.com/martemyev/tethex" homepage = "https://github.com/martemyev/tethex"
url = "https://github.com/martemyev/tethex/archive/v0.0.7.tar.gz" url = "https://github.com/martemyev/tethex/archive/v0.0.7.tar.gz"
git = "https://github.com/martemyev/tethex.git"
maintainers = ['davydden'] maintainers = ['davydden']
version('develop', git=git)
version('0.0.7', '6c9e4a18a6637deb4400c6d77ec03184') version('0.0.7', '6c9e4a18a6637deb4400c6d77ec03184')
version('develop', git='https://github.com/martemyev/tethex.git')
variant('build_type', default='Release', variant('build_type', default='Release',
description='The build type to build', description='The build type to build',

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var/spack/repos/builtin/packages/tioga/package.py
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@ -29,11 +29,10 @@ class Tioga(CMakePackage):
"""Topology Independent Overset Grid Assembly (TIOGA)""" """Topology Independent Overset Grid Assembly (TIOGA)"""
homepage = "https://github.com/jsitaraman/tioga" homepage = "https://github.com/jsitaraman/tioga"
url = "https://github.com/jsitaraman/tioga.git" git = "https://github.com/jsitaraman/tioga.git"
# The master branch doesn't support CMake # The master branch doesn't support CMake
version('develop', git="https://github.com/jsitaraman/tioga.git", version('develop', branch='nalu-api')
branch='nalu-api')
variant('shared', default=False, variant('shared', default=False,
description="Enable building shared libraries") description="Enable building shared libraries")

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var/spack/repos/builtin/packages/tmuxinator/package.py
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@ -27,12 +27,11 @@
class Tmuxinator(Package): class Tmuxinator(Package):
"""A session configuration creator and manager for tmux""" """A session configuration creator and manager for tmux"""
homepage = "https://github.com/tmuxinator/tmuxinator"
url = "https://github.com/tmuxinator/tmuxinator"
version('0.6.11', homepage = "https://github.com/tmuxinator/tmuxinator"
git='https://github.com/tmuxinator/tmuxinator', git = "https://github.com/tmuxinator/tmuxinator.git"
tag='v0.6.11')
version('0.6.11', tag='v0.6.11')
extends('ruby') extends('ruby')

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var/spack/repos/builtin/packages/trilinos/package.py
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@ -45,17 +45,15 @@ class Trilinos(CMakePackage):
""" """
homepage = "https://trilinos.org/" homepage = "https://trilinos.org/"
url = "https://github.com/trilinos/Trilinos/archive/trilinos-release-12-12-1.tar.gz" url = "https://github.com/trilinos/Trilinos/archive/trilinos-release-12-12-1.tar.gz"
git = "https://github.com/trilinos/Trilinos.git"
maintainers = ['aprokop'] maintainers = ['aprokop']
# ###################### Versions ########################## # ###################### Versions ##########################
version('xsdk-0.2.0', version('xsdk-0.2.0', tag='xsdk-0.2.0')
git='https://github.com/trilinos/Trilinos.git', tag='xsdk-0.2.0') version('develop', branch='develop')
version('develop', version('master', branch='master')
git='https://github.com/trilinos/Trilinos.git', branch='develop')
version('master',
git='https://github.com/trilinos/Trilinos.git', branch='master')
version('12.12.1', 'ecd4606fa332212433c98bf950a69cc7') version('12.12.1', 'ecd4606fa332212433c98bf950a69cc7')
version('12.10.1', '667333dbd7c0f031d47d7c5511fd0810') version('12.10.1', '667333dbd7c0f031d47d7c5511fd0810')
version('12.8.1', '9f37f683ee2b427b5540db8a20ed6b15') version('12.8.1', '9f37f683ee2b427b5540db8a20ed6b15')

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var/spack/repos/builtin/packages/tycho2/package.py
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@ -31,9 +31,9 @@ class Tycho2(MakefilePackage):
on unstructured, 3D tetrahedral meshes. on unstructured, 3D tetrahedral meshes.
""" """
homepage = "https://github.com/lanl/tycho2" homepage = "https://github.com/lanl/tycho2"
url = "https://github.com/lanl/tycho2/tarball/v0.1" git = "https://github.com/lanl/tycho2.git"
version('develop', git='https://github.com/lanl/tycho2', branch='master') version('develop', branch='master')
depends_on("mpi") depends_on("mpi")

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var/spack/repos/builtin/packages/typhon/package.py
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@ -32,10 +32,9 @@ class Typhon(CMakePackage):
""" """
homepage = "https://github.com/UK-MAC/Typhon" homepage = "https://github.com/UK-MAC/Typhon"
url = "https://github.com/UK-MAC/Typhon/archive/v3.0.tar.gz" git = "https://github.com/UK-MAC/Typhon.git"
version('develop', git='https://github.com/UK-MAC/Typhon', version('develop', branch='develop')
branch='develop')
version('3.0.1', '89045decfba5fd468ef05ad4c924df8c') version('3.0.1', '89045decfba5fd468ef05ad4c924df8c')
version('3.0', 'ec67cd1aa585ce2410d4fa50514a916f') version('3.0', 'ec67cd1aa585ce2410d4fa50514a916f')

4
var/spack/repos/builtin/packages/typhonio/package.py
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@ -31,10 +31,10 @@ class Typhonio(CMakePackage):
homepage = "http://uk-mac.github.io/typhonio/" homepage = "http://uk-mac.github.io/typhonio/"
url = "https://github.com/UK-MAC/typhonio/archive/v1.6_CMake.tar.gz" url = "https://github.com/UK-MAC/typhonio/archive/v1.6_CMake.tar.gz"
git = "https://github.com/UK-MAC/typhonio.git"
version('develop', branch='cmake_build')
version('1.6_CMake', '8e8b2940a57874205e6d451856db5c2755884bf9') version('1.6_CMake', '8e8b2940a57874205e6d451856db5c2755884bf9')
version('develop', git='https://github.com/UK-MAC/typhonio.git',
branch='cmake_build')
variant('build_type', default='Release', description='The build type to build', variant('build_type', default='Release', description='The build type to build',
values=('Debug', 'Release')) values=('Debug', 'Release'))

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var/spack/repos/builtin/packages/umpire/package.py
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@ -29,13 +29,14 @@
class Umpire(CMakePackage): class Umpire(CMakePackage):
"""An application-focused API for memory management on NUMA & GPU """An application-focused API for memory management on NUMA & GPU
architectures""" architectures"""
url = 'https://github.com/LLNL/Umpire/releases/download/v0.1.4/umpire-0.1.4.tar.gz'
homepage = 'https://github.com/LLNL/Umpire'
version('master', git='https://github.com/LLNL/Umpire.git', branch='master', submodules='True') homepage = 'https://github.com/LLNL/Umpire'
version('develop', git='https://github.com/LLNL/Umpire.git', branch='develop', submodules='True') git = 'https://github.com/LLNL/Umpire.git'
version('0.1.4', git='https://github.com/LLNL/Umpire.git', tag='v0.1.4', submodules='True')
version('0.1.3', git='https://github.com/LLNL/Umpire.git', tag='v0.1.3', submodules='True') version('develop', branch='develop', submodules='True')
version('master', branch='master', submodules='True')
version('0.1.4', tag='v0.1.4', submodules='True')
version('0.1.3', tag='v0.1.3', submodules='True')
variant('cuda', default=False, description='Build with CUDA support') variant('cuda', default=False, description='Build with CUDA support')
variant('fortran', default=False, description='Build C/Fortran API') variant('fortran', default=False, description='Build C/Fortran API')

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var/spack/repos/builtin/packages/valgrind/package.py
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@ -35,17 +35,17 @@ class Valgrind(AutotoolsPackage):
Valgrind is Open Source / Free Software, and is freely available Valgrind is Open Source / Free Software, and is freely available
under the GNU General Public License, version 2. under the GNU General Public License, version 2.
""" """
homepage = "http://valgrind.org/" homepage = "http://valgrind.org/"
url = "https://sourceware.org/pub/valgrind/valgrind-3.13.0.tar.bz2" url = "https://sourceware.org/pub/valgrind/valgrind-3.13.0.tar.bz2"
git = "git://sourceware.org/git/valgrind.git"
version('develop', git=git)
version('3.13.0', '817dd08f1e8a66336b9ff206400a5369') version('3.13.0', '817dd08f1e8a66336b9ff206400a5369')
version('3.12.0', '6eb03c0c10ea917013a7622e483d61bb') version('3.12.0', '6eb03c0c10ea917013a7622e483d61bb')
version('3.11.0', '4ea62074da73ae82e0162d6550d3f129') version('3.11.0', '4ea62074da73ae82e0162d6550d3f129')
version('3.10.1', '60ddae962bc79e7c95cfc4667245707f') version('3.10.1', '60ddae962bc79e7c95cfc4667245707f')
version('3.10.0', '7c311a72a20388aceced1aa5573ce970') version('3.10.0', '7c311a72a20388aceced1aa5573ce970')
version('develop', git='git://sourceware.org/git/valgrind.git')
variant('mpi', default=True, variant('mpi', default=True,
description='Activates MPI support for valgrind') description='Activates MPI support for valgrind')

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var/spack/repos/builtin/packages/veclibfort/package.py
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@ -33,9 +33,10 @@ class Veclibfort(Package):
homepage = "https://github.com/mcg1969/vecLibFort" homepage = "https://github.com/mcg1969/vecLibFort"
url = "https://github.com/mcg1969/vecLibFort/archive/0.4.2.tar.gz" url = "https://github.com/mcg1969/vecLibFort/archive/0.4.2.tar.gz"
git = "https://github.com/mcg1969/vecLibFort.git"
version('develop', git=git)
version('0.4.2', '83395ffcbe8a2122c3f726a5c3a7cf93') version('0.4.2', '83395ffcbe8a2122c3f726a5c3a7cf93')
version('develop', git='https://github.com/mcg1969/vecLibFort.git')
variant('shared', default=True, variant('shared', default=True,
description="Build shared libraries as well as static libs.") description="Build shared libraries as well as static libs.")

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var/spack/repos/builtin/packages/veloc/package.py
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@ -31,12 +31,13 @@ class Veloc(CMakePackage):
homepage = "https://github.com/ECP-VeloC/VELOC" homepage = "https://github.com/ECP-VeloC/VELOC"
url = "https://github.com/ECP-VeloC/VELOC/archive/veloc-1.0rc1.zip" url = "https://github.com/ECP-VeloC/VELOC/archive/veloc-1.0rc1.zip"
tags = ['ecp'] git = "https://github.com/ecp-veloc/veloc.git"
tags = ['ecp']
version('master', branch='master')
version('1.0', '98fe2d9abd2a1b53d7a52267dab91fae') version('1.0', '98fe2d9abd2a1b53d7a52267dab91fae')
version('1.0rc1', 'c6db0de56b5b865183b1fa719ac74c1d') version('1.0rc1', 'c6db0de56b5b865183b1fa719ac74c1d')
version('master', git='https://github.com/ecp-veloc/veloc.git',
branch='master')
depends_on('boost~atomic~chrono~clanglibcpp~date_time~debug~exception' depends_on('boost~atomic~chrono~clanglibcpp~date_time~debug~exception'
'~filesystem~graph~icu~iostreams~locale~log~math~mpi' '~filesystem~graph~icu~iostreams~locale~log~math~mpi'

6
var/spack/repos/builtin/packages/verrou/package.py
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@ -41,11 +41,9 @@ class Verrou(AutotoolsPackage):
homepage = "https://github.com/edf-hpc/verrou" homepage = "https://github.com/edf-hpc/verrou"
url = "https://github.com/edf-hpc/verrou/archive/v2.0.0.tar.gz" url = "https://github.com/edf-hpc/verrou/archive/v2.0.0.tar.gz"
git = "https://github.com/edf-hpc/verrou.git"
version('develop', version('develop', branch='master')
git='https://github.com/edf-hpc/verrou.git',
branch='master')
version('2.0.0', '388d493df3f253c9b049ce0ceae55fd6') version('2.0.0', '388d493df3f253c9b049ce0ceae55fd6')
version('1.1.0', '9752d776fb534890e5e29f9721ee6125') version('1.1.0', '9752d776fb534890e5e29f9721ee6125')

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var/spack/repos/builtin/packages/votca-csg/package.py
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@ -35,8 +35,9 @@ class VotcaCsg(CMakePackage):
""" """
homepage = "http://www.votca.org" homepage = "http://www.votca.org"
url = "https://github.com/votca/csg/tarball/v1.4" url = "https://github.com/votca/csg/tarball/v1.4"
git = "https://github.com/votca/csg.git"
version('develop', git='https://github.com/votca/csg', branch='master') version('develop', branch='master')
version('1.4', 'd009e761e5e3afd51eed89c420610a67') version('1.4', 'd009e761e5e3afd51eed89c420610a67')
version('1.4.1', 'e4195d69db2036e9d76f22115ae31f81') version('1.4.1', 'e4195d69db2036e9d76f22115ae31f81')

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var/spack/repos/builtin/packages/votca-ctp/package.py
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@ -34,10 +34,9 @@ class VotcaCtp(CMakePackage):
This package contains the VOTCA charge transport engine. This package contains the VOTCA charge transport engine.
""" """
homepage = "http://www.votca.org" homepage = "http://www.votca.org"
# No release yet git = "https://github.com/votca/ctp.git"
# url = "https://github.com/votca/ctp/tarball/v1.4"
version('develop', git='https://github.com/votca/ctp', branch='master') version('develop', branch='master')
depends_on("cmake@2.8:", type='build') depends_on("cmake@2.8:", type='build')
depends_on("votca-tools@develop", when='@develop') depends_on("votca-tools@develop", when='@develop')

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var/spack/repos/builtin/packages/votca-tools/package.py
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@ -35,8 +35,9 @@ class VotcaTools(CMakePackage):
""" """
homepage = "http://www.votca.org" homepage = "http://www.votca.org"
url = "https://github.com/votca/tools/tarball/v1.4" url = "https://github.com/votca/tools/tarball/v1.4"
git = "https://github.com/votca/tools.git"
version('develop', git='https://github.com/votca/tools', branch='master') version('develop', branch='master')
version('1.4', 'cd47868e9f28e2c7b9d01f95aa0185ca') version('1.4', 'cd47868e9f28e2c7b9d01f95aa0185ca')
version('1.4.1', '3176b72f8a41ec053cc740a5398e7dc4') version('1.4.1', '3176b72f8a41ec053cc740a5398e7dc4')

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var/spack/repos/builtin/packages/votca-xtp/package.py
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@ -35,8 +35,9 @@ class VotcaXtp(CMakePackage):
""" """
homepage = "http://www.votca.org" homepage = "http://www.votca.org"
url = "https://github.com/votca/xtp/tarball/v1.4" url = "https://github.com/votca/xtp/tarball/v1.4"
git = "https://github.com/votca/xtp.git"
version('develop', git='https://github.com/votca/xtp', branch='master') version('develop', branch='master')
version('1.4.1', '31a2dbd8bd48bf337bc88b20ab312050') version('1.4.1', '31a2dbd8bd48bf337bc88b20ab312050')
depends_on("cmake@2.8:", type='build') depends_on("cmake@2.8:", type='build')

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var/spack/repos/builtin/packages/vpfft/package.py
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@ -35,10 +35,11 @@ class Vpfft(MakefilePackage):
""" """
homepage = "http://www.exmatex.org/vpfft.html" homepage = "http://www.exmatex.org/vpfft.html"
url = "https://github.com/exmatex/VPFFT/archive/master.tar.gz" git = "https://github.com/exmatex/VPFFT.git"
tag = ['proxy-app']
version('develop', git='https://github.com/exmatex/VPFFT.git') tag = ['proxy-app']
version('develop')
depends_on('eigen') depends_on('eigen')
depends_on('fftw') depends_on('fftw')

4
var/spack/repos/builtin/packages/vpic/package.py
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@ -36,9 +36,9 @@ class Vpic(CMakePackage):
order finite-difference-time-domain (FDTD) solve. order finite-difference-time-domain (FDTD) solve.
""" """
homepage = "https://github.com/lanl/vpic" homepage = "https://github.com/lanl/vpic"
url = "https://github.com/lanl/vpic/tarball/v1.0" git = "https://github.com/lanl/vpic.git"
version('develop', git='https://github.com/lanl/vpic', branch='master', submodules=True) version('develop', branch='master', submodules=True)
depends_on("cmake@3.1:", type='build') depends_on("cmake@3.1:", type='build')
depends_on('mpi') depends_on('mpi')

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var/spack/repos/builtin/packages/vtkh/package.py
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@ -33,12 +33,9 @@ class Vtkh(Package):
and DIY2 to provide a toolkit with hybrid parallel capabilities.""" and DIY2 to provide a toolkit with hybrid parallel capabilities."""
homepage = "https://github.com/Alpine-DAV/vtk-h" homepage = "https://github.com/Alpine-DAV/vtk-h"
url = "https://github.com/Alpine-DAV/vtk-h" git = "https://github.com/Alpine-DAV/vtk-h.git"
version('master', version('master', branch='master', submodules=True)
git='https://github.com/Alpine-DAV/vtk-h.git',
branch='master',
submodules=True)
maintainers = ['cyrush'] maintainers = ['cyrush']

6
var/spack/repos/builtin/packages/vtkm/package.py
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@ -37,13 +37,11 @@ class Vtkm(Package):
homepage = "https://m.vtk.org/" homepage = "https://m.vtk.org/"
url = "https://gitlab.kitware.com/api/v4/projects/vtk%2Fvtk-m/repository/archive.tar.gz?sha=v1.1.0" url = "https://gitlab.kitware.com/api/v4/projects/vtk%2Fvtk-m/repository/archive.tar.gz?sha=v1.1.0"
git = "https://gitlab.kitware.com/vtk/vtk-m.git"
version('master', branch='master')
version('1.1.0', "6aab1c0885f6ffaaffcf07930873d0df") version('1.1.0', "6aab1c0885f6ffaaffcf07930873d0df")
version('master',
git='https://gitlab.kitware.com/vtk/vtk-m.git',
branch='master')
variant("cuda", default=False, description="build cuda support") variant("cuda", default=False, description="build cuda support")
variant("tbb", default=True, description="build TBB support") variant("tbb", default=True, description="build TBB support")

3
var/spack/repos/builtin/packages/wgsim/package.py
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@ -35,8 +35,9 @@ class Wgsim(Package):
can be partly compensated by simulating INDEL polymorphisms.""" can be partly compensated by simulating INDEL polymorphisms."""
homepage = "https://github.com/lh3/wgsim" homepage = "https://github.com/lh3/wgsim"
git = "https://github.com/lh3/wgsim.git"
version('2011.10.17', git='https://github.com/lh3/wgsim.git', commit='a12da3375ff3b51a5594d4b6fa35591173ecc229') version('2011.10.17', commit='a12da3375ff3b51a5594d4b6fa35591173ecc229')
depends_on('zlib') depends_on('zlib')

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var/spack/repos/builtin/packages/wt/package.py
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@ -31,11 +31,11 @@ class Wt(CMakePackage):
Wt is a C++ library for developing web applications.""" Wt is a C++ library for developing web applications."""
homepage = "http://www.webtoolkit.eu/wt" homepage = "http://www.webtoolkit.eu/wt"
url = "https://github.com/emweb/wt/archive/3.3.7.tar.gz" url = "https://github.com/emweb/wt/archive/3.3.7.tar.gz"
git = "https://github.com/emweb/wt.git"
version('master', branch='master')
version('3.3.7', '09858901f2dcf5c3d36a9237daba3e3f') version('3.3.7', '09858901f2dcf5c3d36a9237daba3e3f')
version('master', branch='master',
git='https://github.com/emweb/wt.git')
# wt builds in parallel, but requires more than 5 GByte RAM per -j <njob> # wt builds in parallel, but requires more than 5 GByte RAM per -j <njob>
# which most machines do not provide and crash the build # which most machines do not provide and crash the build

5
var/spack/repos/builtin/packages/wx/package.py
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@ -35,15 +35,16 @@ class Wx(AutotoolsPackage):
native look and feel because it uses the platform's native API native look and feel because it uses the platform's native API
rather than emulating the GUI. It's also extensive, free, rather than emulating the GUI. It's also extensive, free,
open-source and mature.""" open-source and mature."""
homepage = "http://www.wxwidgets.org/" homepage = "http://www.wxwidgets.org/"
url = "https://github.com/wxWidgets/wxWidgets/releases/download/v3.1.0/wxWidgets-3.1.0.tar.bz2" url = "https://github.com/wxWidgets/wxWidgets/releases/download/v3.1.0/wxWidgets-3.1.0.tar.bz2"
git = "https://github.com/wxWidgets/wxWidgets.git"
version('develop', branch='master')
version('3.1.0', '2170839cfa9d9322e8ee8368b21a15a2497b4f11') version('3.1.0', '2170839cfa9d9322e8ee8368b21a15a2497b4f11')
version('3.0.2', '6461eab4428c0a8b9e41781b8787510484dea800') version('3.0.2', '6461eab4428c0a8b9e41781b8787510484dea800')
version('3.0.1', '73e58521d6871c9f4d1e7974c6e3a81629fddcf8') version('3.0.1', '73e58521d6871c9f4d1e7974c6e3a81629fddcf8')
version('develop', git='https://github.com/wxWidgets/wxWidgets.git', branch='master')
patch('math_include.patch', when='@3.0.1:3.0.2') patch('math_include.patch', when='@3.0.1:3.0.2')
depends_on('pkgconfig', type='build') depends_on('pkgconfig', type='build')

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var/spack/repos/builtin/packages/xcb-util-xrm/package.py
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@ -30,14 +30,11 @@ class XcbUtilXrm(AutotoolsPackage):
for the X resource manager.""" for the X resource manager."""
homepage = "https://github.com/Airblader/xcb-util-xrm" homepage = "https://github.com/Airblader/xcb-util-xrm"
url = "https://github.com/Airblader/xcb-util-xrm/archive/v1.2.tar.gz" git = "https://github.com/Airblader/xcb-util-xrm.git"
# This GitHub project includes some git submodules, which must be fetched # This GitHub project includes some git submodules, which must be fetched
# in order to build it. # in order to build it.
version('1.2', version('1.2', tag='v1.2', submodules=True)
git='https://github.com/Airblader/xcb-util-xrm',
tag='v1.2',
submodules=True)
depends_on('autoconf', type='build') depends_on('autoconf', type='build')
depends_on('automake', type='build') depends_on('automake', type='build')

4
var/spack/repos/builtin/packages/xclip/package.py
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@ -34,9 +34,9 @@ class Xclip(AutotoolsPackage):
which can then be redirected to a file or another program.""" which can then be redirected to a file or another program."""
homepage = "https://github.com/astrand/xclip" homepage = "https://github.com/astrand/xclip"
url = "https://github.com/astrand/xclip" git = "https://github.com/astrand/xclip.git"
version('0.13', git='https://github.com/astrand/xclip', commit='9aa7090c3b8b437c6489edca32ae43d82e0c1281') version('0.13', commit='9aa7090c3b8b437c6489edca32ae43d82e0c1281')
depends_on('libxmu') depends_on('libxmu')
depends_on('libx11') depends_on('libx11')

5
var/spack/repos/builtin/packages/xhmm/package.py
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@ -32,10 +32,9 @@ class Xhmm(MakefilePackage):
(or targeted sequencing, more generally).""" (or targeted sequencing, more generally)."""
homepage = "http://atgu.mgh.harvard.edu/xhmm/index.shtml" homepage = "http://atgu.mgh.harvard.edu/xhmm/index.shtml"
url = "https://bitbucket.org/statgen/xhmm.git" git = "https://bitbucket.org/statgen/xhmm.git"
version('20160104', git='https://bitbucket.org/statgen/xhmm.git', version('20160104', commit='cc14e528d90932f059ac4fe94e869e81221fd732')
commit='cc14e528d90932f059ac4fe94e869e81221fd732')
depends_on('lapack') depends_on('lapack')

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var/spack/repos/builtin/packages/xsdktrilinos/package.py
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@ -33,9 +33,10 @@ class Xsdktrilinos(CMakePackage):
""" """
homepage = "https://trilinos.org/" homepage = "https://trilinos.org/"
url = "https://github.com/trilinos/xSDKTrilinos/archive/trilinos-release-12-8-1.tar.gz" url = "https://github.com/trilinos/xSDKTrilinos/archive/trilinos-release-12-8-1.tar.gz"
git = "https://github.com/trilinos/xSDKTrilinos.git"
version('develop', git='https://github.com/trilinos/xSDKTrilinos.git', tag='master') version('develop', tag='master')
version('xsdk-0.2.0', git='https://github.com/trilinos/xSDKTrilinos.git', tag='xsdk-0.2.0') version('xsdk-0.2.0', tag='xsdk-0.2.0')
version('12.8.1', '9cc338ded17d1e10ea6c0dc18b22dcd4') version('12.8.1', '9cc338ded17d1e10ea6c0dc18b22dcd4')
version('12.6.4', '44c4c54ccbac73bb8939f68797b9454a') version('12.6.4', '44c4c54ccbac73bb8939f68797b9454a')

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var/spack/repos/builtin/packages/xsimd/package.py
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@ -30,10 +30,11 @@ class Xsimd(CMakePackage):
homepage = "http://quantstack.net/xsimd" homepage = "http://quantstack.net/xsimd"
url = "https://github.com/QuantStack/xsimd/archive/3.1.0.tar.gz" url = "https://github.com/QuantStack/xsimd/archive/3.1.0.tar.gz"
git = "https://github.com/QuantStack/xsimd.git"
maintainers = ['ax3l'] maintainers = ['ax3l']
version('develop', branch='master', version('develop', branch='master')
git='https://github.com/QuantStack/xsimd.git')
version('4.0.0', '4186ec94985daa3fc284d9d0d4aa03e8') version('4.0.0', '4186ec94985daa3fc284d9d0d4aa03e8')
version('3.1.0', '29c1c525116cbda28f610e2bf24a827e') version('3.1.0', '29c1c525116cbda28f610e2bf24a827e')

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var/spack/repos/builtin/packages/xtensor-python/package.py
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@ -30,10 +30,11 @@ class XtensorPython(CMakePackage):
homepage = "https://xtensor-python.readthedocs.io" homepage = "https://xtensor-python.readthedocs.io"
url = "https://github.com/QuantStack/xtensor-python/archive/0.17.0.tar.gz" url = "https://github.com/QuantStack/xtensor-python/archive/0.17.0.tar.gz"
git = "https://github.com/QuantStack/xtensor-python.git"
maintainers = ['ax3l'] maintainers = ['ax3l']
version('develop', branch='master', version('develop', branch='master')
git='https://github.com/QuantStack/xtensor-python.git')
version('0.17.0', '51d22e42909a81201c3421d9e119eed0') version('0.17.0', '51d22e42909a81201c3421d9e119eed0')
depends_on('xtensor@0.15.1:0.15.99', when='@0.17.0:') depends_on('xtensor@0.15.1:0.15.99', when='@0.17.0:')

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var/spack/repos/builtin/packages/xtensor/package.py
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@ -30,10 +30,11 @@ class Xtensor(CMakePackage):
homepage = "http://quantstack.net/xtensor" homepage = "http://quantstack.net/xtensor"
url = "https://github.com/QuantStack/xtensor/archive/0.13.1.tar.gz" url = "https://github.com/QuantStack/xtensor/archive/0.13.1.tar.gz"
git = "https://github.com/QuantStack/xtensor.git"
maintainers = ['ax3l'] maintainers = ['ax3l']
version('develop', branch='master', version('develop', branch='master')
git='https://github.com/QuantStack/xtensor.git')
version('0.15.1', 'c24ecc406003bd1ac22291f1f7cac29a') version('0.15.1', 'c24ecc406003bd1ac22291f1f7cac29a')
version('0.13.1', '80e7e33f05066d17552bf0f8b582dcc5') version('0.13.1', '80e7e33f05066d17552bf0f8b582dcc5')

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var/spack/repos/builtin/packages/xtl/package.py
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@ -30,10 +30,11 @@ class Xtl(CMakePackage):
homepage = "https://github.com/QuantStack/xtl" homepage = "https://github.com/QuantStack/xtl"
url = "https://github.com/QuantStack/xtl/archive/0.3.4.tar.gz" url = "https://github.com/QuantStack/xtl/archive/0.3.4.tar.gz"
git = "https://github.com/QuantStack/xtl.git"
maintainers = ['ax3l'] maintainers = ['ax3l']
version('develop', branch='master', version('develop', branch='master')
git='https://github.com/QuantStack/xtl.git')
version('0.4.0', '48c76b63ab12e497a53fb147c41ae747') version('0.4.0', '48c76b63ab12e497a53fb147c41ae747')
version('0.3.4', 'b76548a55f1e171a9c849e5ed543e8b3') version('0.3.4', 'b76548a55f1e171a9c849e5ed543e8b3')
version('0.3.3', '09b6d9611e460d9280bf1156bcca20f5') version('0.3.3', '09b6d9611e460d9280bf1156bcca20f5')

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var/spack/repos/builtin/packages/yajl/package.py
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@ -30,6 +30,7 @@ class Yajl(CMakePackage):
homepage = "http://lloyd.github.io/yajl/" homepage = "http://lloyd.github.io/yajl/"
url = "https://github.com/lloyd/yajl/archive/2.1.0.zip" url = "https://github.com/lloyd/yajl/archive/2.1.0.zip"
git = "https://github.com/lloyd/yajl.git"
version('develop', git='https://github.com/lloyd/yajl.git', branch='master') version('develop', branch='master')
version('2.1.0', '5eb9c16539bf354b937fcb20e263d1eb') version('2.1.0', '5eb9c16539bf354b937fcb20e263d1eb')

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var/spack/repos/builtin/packages/yaml-cpp/package.py
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@ -30,10 +30,11 @@ class YamlCpp(CMakePackage):
homepage = "https://github.com/jbeder/yaml-cpp" homepage = "https://github.com/jbeder/yaml-cpp"
url = "https://github.com/jbeder/yaml-cpp/archive/yaml-cpp-0.5.3.tar.gz" url = "https://github.com/jbeder/yaml-cpp/archive/yaml-cpp-0.5.3.tar.gz"
git = "https://github.com/jbeder/yaml-cpp.git"
version('develop', branch='master')
version('0.6.2', '5b943e9af0060d0811148b037449ef82') version('0.6.2', '5b943e9af0060d0811148b037449ef82')
version('0.5.3', '2bba14e6a7f12c7272f87d044e4a7211') version('0.5.3', '2bba14e6a7f12c7272f87d044e4a7211')
version('develop', git='https://github.com/jbeder/yaml-cpp', branch='master')
variant('shared', default=True, variant('shared', default=True,
description='Enable build of shared libraries') description='Enable build of shared libraries')

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var/spack/repos/builtin/packages/yasm/package.py
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@ -30,10 +30,12 @@ class Yasm(AutotoolsPackage):
supports the x86 and AMD64 instruction sets, accepts NASM and supports the x86 and AMD64 instruction sets, accepts NASM and
GAS assembler syntaxes and outputs binary, ELF32 and ELF64 GAS assembler syntaxes and outputs binary, ELF32 and ELF64
object formats.""" object formats."""
homepage = "http://yasm.tortall.net" homepage = "http://yasm.tortall.net"
url = "http://www.tortall.net/projects/yasm/releases/yasm-1.3.0.tar.gz" url = "http://www.tortall.net/projects/yasm/releases/yasm-1.3.0.tar.gz"
git = "https://github.com/yasm/yasm.git"
version('develop', git='https://github.com/yasm/yasm/') version('develop', git=git)
version('1.3.0', 'fc9e586751ff789b34b1f21d572d96af') version('1.3.0', 'fc9e586751ff789b34b1f21d572d96af')
depends_on('autoconf', when='@develop') depends_on('autoconf', when='@develop')

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var/spack/repos/builtin/packages/yorick/package.py
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@ -40,12 +40,11 @@ class Yorick(Package):
homepage = "http://dhmunro.github.io/yorick-doc/" homepage = "http://dhmunro.github.io/yorick-doc/"
url = "https://github.com/dhmunro/yorick/archive/y_2_2_04.tar.gz" url = "https://github.com/dhmunro/yorick/archive/y_2_2_04.tar.gz"
git = "https://github.com/dhmunro/yorick.git"
version('master', branch='master')
version('2.2.04', '1b5b0da6ad81b2d9dba64d991ec17939') version('2.2.04', '1b5b0da6ad81b2d9dba64d991ec17939')
version('master', branch='master', version('f90-plugin', branch='f90-plugin')
git='https://github.com/dhmunro/yorick.git')
version('f90-plugin', branch='f90-plugin',
git='https://github.com/trmwzm/yorick.git')
variant('X', default=False, description='Enable X11 support') variant('X', default=False, description='Enable X11 support')

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var/spack/repos/builtin/packages/zeromq/package.py
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@ -26,12 +26,13 @@
class Zeromq(AutotoolsPackage): class Zeromq(AutotoolsPackage):
""" The ZMQ networking/concurrency library and core API """ """The ZMQ networking/concurrency library and core API"""
homepage = "http://zguide.zeromq.org/" homepage = "http://zguide.zeromq.org/"
url = "http://download.zeromq.org/zeromq-4.1.2.tar.gz" url = "http://download.zeromq.org/zeromq-4.1.2.tar.gz"
git = "https://github.com/zeromq/libzmq.git"
version('develop', branch='master', version('develop', branch='master')
git='https://github.com/zeromq/libzmq.git')
version('4.2.5', 'a1c95b34384257e986842f4d006957b8', version('4.2.5', 'a1c95b34384257e986842f4d006957b8',
url='https://github.com/zeromq/libzmq/releases/download/v4.2.5/zeromq-4.2.5.tar.gz') url='https://github.com/zeromq/libzmq/releases/download/v4.2.5/zeromq-4.2.5.tar.gz')
version('4.2.2', '52499909b29604c1e47a86f1cb6a9115') version('4.2.2', '52499909b29604c1e47a86f1cb6a9115')