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dssp: convert to new stand-alone test process (#38368)

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Tamara Dahlgren 2023-06-14 07:27:49 -07:00 committed by GitHub
parent 2db09f27af
commit 40d6b84b4d
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1 changed files with 6 additions and 10 deletions
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16
var/spack/repos/builtin/packages/dssp/package.py
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@ -51,13 +51,9 @@ def cache_test_sources(self):
"""Save off the pdb sources for stand-alone testing."""
self.cache_extra_test_sources("pdb")
def test(self):
"""Perform stand-alone/smoke test on installed package."""
pdb_path = join_path(self.test_suite.current_test_cache_dir, "pdb")
self.run_test(
"mkdssp",
options=["1ALK.pdb", "1alk.dssp"],
purpose="test: calculating structure for example",
installed=True,
work_dir=pdb_path,
)
def test_mkdssp(self):
"""calculate structure for example"""
pdb_path = self.test_suite.current_test_cache_dir.pdb
mkdssp = which(self.prefix.bin.mkdssp)
with working_dir(pdb_path):
mkdssp("1ALK.pdb", "1alk.dssp")