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Update pipeline configurations

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Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
This commit is contained in:
Massimiliano Culpo 2024-09-13 10:50:29 +02:00
parent eaf4483db7
commit 41bb68a623
No known key found for this signature in database
GPG Key ID: 3E52BB992233066C
15 changed files with 195 additions and 236 deletions
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2
lib/spack/docs/pipelines.rst
View File

@ -330,7 +330,7 @@ that ``--tests`` is passed to ``spack ci rebuild`` as part of the
- spack --version
- cd ${SPACK_CONCRETE_ENV_DIR}
- spack env activate --without-view .
- spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'"
- spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture.platform}/{architecture.target}/{name}-{version}-{hash}'"
- mkdir -p ${SPACK_ARTIFACTS_ROOT}/user_data
- if [[ -r /mnt/key/intermediate_ci_signing_key.gpg ]]; then spack gpg trust /mnt/key/intermediate_ci_signing_key.gpg; fi
- if [[ -r /mnt/key/spack_public_key.gpg ]]; then spack gpg trust /mnt/key/spack_public_key.gpg; fi

3
share/spack/gitlab/cloud_pipelines/configs/config.yaml
View File

@ -6,5 +6,4 @@ config:
root: /home/software/spack
padded_length: 256
projections:
all: '{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'
all: "{architecture.platform}/{architecture.target}/{name}-{version}-{hash}"

2
share/spack/gitlab/cloud_pipelines/configs/linux/ci.yaml
View File

@ -4,7 +4,7 @@ ci:
before_script-:
# Test package relocation on linux using a modified prefix
# This is not well supported on MacOS (https://github.com/spack/spack/issues/37162)
- - spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'"
- - spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture.platform}/{architecture.target}/{name}-{version}-{hash}'"
- match_behavior: first
submapping:
- match:

2
share/spack/gitlab/cloud_pipelines/configs/linux/ppc64le/ci.yaml
View File

@ -15,7 +15,7 @@ ci:
- cd ${SPACK_CONCRETE_ENV_DIR}
- spack env activate --without-view .
- if [ -n "$SPACK_BUILD_JOBS" ]; then spack config add "config:build_jobs:$SPACK_BUILD_JOBS"; fi
- spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'"
- spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture.platform}/{architecture.target}/{name}-{version}-{hash}'"
- mkdir -p ${SPACK_ARTIFACTS_ROOT}/user_data
- if [[ -r /mnt/key/e4s.gpg ]]; then spack gpg trust /mnt/key/e4s.gpg; fi
- if [[ -r /mnt/key/spack_public_key.gpg ]]; then spack gpg trust /mnt/key/spack_public_key.gpg; fi

21
share/spack/gitlab/cloud_pipelines/stacks/aws-isc-aarch64/spack.yaml
View File

@ -57,34 +57,22 @@ spack:
- compiler_specs:
- gcc@11.2
# Licensing OK?
# - intel-oneapi-compilers@2022.1
# - nvhpc
- app_specs:
- bwa
# Depends on simde which requires newer compiler?
#- bowtie2
# Requires x86_64 specific ASM
#- cistem
- cromwell
- fastqc
- flux-sched
- flux-core
- flux-pmix
- gatk
- gromacs
- lammps
- wrf build_type=dm+sm
- mfem
- mpas-model ^parallelio+pnetcdf
- nextflow
- octave
- openfoam
- osu-micro-benchmarks
- parallel
# - paraview
- picard
- quantum-espresso
- raja
# Depends on bowtie2 -> simde which requires newer compiler?
@ -94,12 +82,9 @@ spack:
- salmon
- samtools
- seqtk
- snakemake
- star
# Requires gcc@9:
#- ufs-weather-model
# requires LLVM which fails without constraint
#- visit
- lib_specs:
- openmpi fabrics=ofi
@ -114,7 +99,6 @@ spack:
- target:
- target=aarch64
specs:
- matrix:
@ -130,7 +114,10 @@ spack:
- matrix:
- - $compiler_specs
- - $compiler
- - $target
- matrix:
- [cromwell, fastqc, gatk, nextflow, parallel, picard, snakemake]
- [$target]
ci:
pipeline-gen:

45
share/spack/gitlab/cloud_pipelines/stacks/aws-isc/spack.yaml
View File

@ -2,6 +2,8 @@ spack:
view: false
packages:
all:
require:
- target=x86_64_v3
providers:
blas:
- openblas
@ -12,7 +14,8 @@ spack:
- mpich
variants: +mpi
tbb:
require: intel-tbb
require:
- intel-tbb
binutils:
variants: +ld +gold +headers +libiberty ~nls
version:
@ -43,8 +46,6 @@ spack:
- '1.18'
relion:
variants: ~mklfft
# texlive:
# version: [20210325]
trilinos:
variants: +amesos +amesos2 +anasazi +aztec +belos +boost +epetra +epetraext
+ifpack +ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu
@ -57,56 +58,35 @@ spack:
- compiler_specs:
- gcc@11.2
# Licensing OK?
# - intel-oneapi-compilers@2022.1
# - nvhpc
- cuda_specs:
# Disabled for consistency with aarch64
#- relion +cuda cuda_arch=70
- raja +cuda cuda_arch=70
- mfem +cuda cuda_arch=70
- app_specs:
- bwa
# Disabled for consistency with aarch64
#- bowtie2
# Disabled for consistency with aarch64
#- cistem
- cromwell
- fastqc
- flux-sched
- flux-core
- flux-pmix
- gatk
- gromacs
- lammps
- wrf build_type=dm+sm
- mfem
- mpas-model ^parallelio+pnetcdf
- nextflow
- octave
- openfoam
- osu-micro-benchmarks
- parallel
# - paraview
- picard
- quantum-espresso
# Build broken for gcc@7.3.1 x86_64_v4 (error: '_mm512_loadu_epi32' was not declared in this scope)
#- raja
# Disabled for consistency with aarch64
#- rsem
# Errors on texlive
#- rstudio
- salmon
- samtools
- seqtk
- snakemake
- star
# Requires gcc@9:
#- ufs-weather-model
# Disabled for consistency with aarch64
#- visit
- lib_specs:
- openmpi fabrics=ofi
@ -118,31 +98,32 @@ spack:
- compiler:
- '%gcc@7.3.1'
- target:
- target=x86_64_v3
specs:
- matrix:
- - $cuda_specs
- - $compiler
- - $target
- matrix:
- - $app_specs
- - $compiler
- - $target
- matrix:
- - $lib_specs
- - $compiler
- - $target
- matrix:
- - $compiler_specs
- - $compiler
- - $target
- cromwell
- fastqc
- gatk
- parallel
- nextflow
- picard
- snakemake
ci:
pipeline-gen:

30
share/spack/gitlab/cloud_pipelines/stacks/aws-pcluster-neoverse_v1/spack.yaml
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@ -32,24 +32,21 @@ spack:
- for i in $(aws s3 ls --recursive ${SPACK_REMOTE_MIRROR_OVERRIDE}/build_cache/ | grep armpl | awk '{print $4}' | sed -e 's?^.*build_cache/??g'); do aws s3 rm ${SPACK_REMOTE_MIRROR_OVERRIDE}/build_cache/$i; done
cdash:
build-group: AWS Packages
config:
shared_linking:
missing_library_policy: ignore # due to use of externals
compilers:
- compiler:
environment: {}
extra_rpaths: []
flags: {}
modules: []
operating_system: amzn2
paths:
cc: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-aarch64/gcc-7.3.1/gcc-12.4.0-v6wxye6ijzrxnzxftcwnpu3psohsjl2b/bin/gcc
cxx: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-aarch64/gcc-7.3.1/gcc-12.4.0-v6wxye6ijzrxnzxftcwnpu3psohsjl2b/bin/g++
f77: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-aarch64/gcc-7.3.1/gcc-12.4.0-v6wxye6ijzrxnzxftcwnpu3psohsjl2b/bin/gfortran
fc: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-aarch64/gcc-7.3.1/gcc-12.4.0-v6wxye6ijzrxnzxftcwnpu3psohsjl2b/bin/gfortran
spec: gcc@=12.4.0
target: aarch64
packages:
gcc:
externals:
- spec: gcc@=12.4.0
prefix: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-aarch64/gcc-7.3.1/gcc-12.4.0-v6wxye6ijzrxnzxftcwnpu3psohsjl2b
extra_attributes:
compilers:
c: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-aarch64/gcc-7.3.1/gcc-12.4.0-v6wxye6ijzrxnzxftcwnpu3psohsjl2b/bin/gcc
cxx: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-aarch64/gcc-7.3.1/gcc-12.4.0-v6wxye6ijzrxnzxftcwnpu3psohsjl2b/bin/g++
fortran: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-aarch64/gcc-7.3.1/gcc-12.4.0-v6wxye6ijzrxnzxftcwnpu3psohsjl2b/bin/gfortran
acfl:
require:
- '%gcc target=aarch64'
@ -73,7 +70,7 @@ spack:
- mpich pmi=pmi2 device=ch4 netmod=ofi +slurm
nvhpc:
require:
- nvhpc %gcc target=aarch64
- "nvhpc target=aarch64"
openfoam:
require:
- openfoam ^scotch@6.0.9
@ -85,7 +82,7 @@ spack:
# require:
# - one_of: ["palace cxxflags=\"-include cstdint\" ^fmt@9.1.0"]
pmix:
require: 'pmix@3:'
require: "pmix@3:"
quantum-espresso:
require:
- quantum-espresso@6.6 %gcc ^armpl-gcc
@ -95,7 +92,6 @@ spack:
- prefix: /opt/slurm
spec: slurm@22.05.8 +pmix
all:
compiler: [gcc, arm, nvhpc, clang]
providers:
blas: [armpl-gcc, openblas]
fftw-api: [armpl-gcc, fftw]

50
share/spack/gitlab/cloud_pipelines/stacks/aws-pcluster-x86_64_v4/spack.yaml
View File

@ -36,38 +36,32 @@ spack:
- for i in $(aws s3 ls --recursive ${SPACK_REMOTE_MIRROR_OVERRIDE}/build_cache/ | grep armpl | awk '{print $4}' | sed -e 's?^.*build_cache/??g'); do aws s3 rm ${SPACK_REMOTE_MIRROR_OVERRIDE}/build_cache/$i; done
cdash:
build-group: AWS Packages
config:
shared_linking:
missing_library_policy: ignore # due to use of externals
compilers:
- compiler:
environment: {}
extra_rpaths: []
flags: {}
modules: []
operating_system: amzn2
paths:
cc: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-7.3.1/gcc-12.4.0-pttzchh7o54nhmycj4wgzw5mic6rk2nb/bin/gcc
cxx: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-7.3.1/gcc-12.4.0-pttzchh7o54nhmycj4wgzw5mic6rk2nb/bin/g++
f77: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-7.3.1/gcc-12.4.0-pttzchh7o54nhmycj4wgzw5mic6rk2nb/bin/gfortran
fc: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-7.3.1/gcc-12.4.0-pttzchh7o54nhmycj4wgzw5mic6rk2nb/bin/gfortran
spec: gcc@=12.4.0
target: x86_64
- compiler:
environment: {}
extra_rpaths:
- /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-7.3.1/gcc-12.4.0-pttzchh7o54nhmycj4wgzw5mic6rk2nb/lib64
flags: {}
modules: []
operating_system: amzn2
paths:
cc: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-12.4.0/intel-oneapi-compilers-2024.1.0-f5u3psfhbwscasajkn324igtupn3blop/compiler/2024.1/bin/icx
cxx: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-12.4.0/intel-oneapi-compilers-2024.1.0-f5u3psfhbwscasajkn324igtupn3blop/compiler/2024.1/bin/icpx
f77: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-12.4.0/intel-oneapi-compilers-2024.1.0-f5u3psfhbwscasajkn324igtupn3blop/compiler/2024.1/bin/ifx
fc: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-12.4.0/intel-oneapi-compilers-2024.1.0-f5u3psfhbwscasajkn324igtupn3blop/compiler/2024.1/bin/ifx
spec: oneapi@=2024.1.0
target: x86_64
packages:
gcc:
externals:
- spec: gcc@=12.4.0
prefix: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-7.3.1/gcc-12.4.0-pttzchh7o54nhmycj4wgzw5mic6rk2nb
extra_attributes:
compilers:
c: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-7.3.1/gcc-12.4.0-pttzchh7o54nhmycj4wgzw5mic6rk2nb/bin/gcc
cxx: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-7.3.1/gcc-12.4.0-pttzchh7o54nhmycj4wgzw5mic6rk2nb/bin/g++
fortran: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-7.3.1/gcc-12.4.0-pttzchh7o54nhmycj4wgzw5mic6rk2nb/bin/gfortran
intel-oneapi-compilers:
externals:
- spec: intel-oneapi-compilers@=2024.1.0
prefix: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-12.4.0/intel-oneapi-compilers-2024.1.0-f5u3psfhbwscasajkn324igtupn3blop
extra_attributes:
compilers:
c: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-12.4.0/intel-oneapi-compilers-2024.1.0-f5u3psfhbwscasajkn324igtupn3blop/compiler/2024.1/bin/icx
cxx: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-12.4.0/intel-oneapi-compilers-2024.1.0-f5u3psfhbwscasajkn324igtupn3blop/compiler/2024.1/bin/icpx
fortran: /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-12.4.0/intel-oneapi-compilers-2024.1.0-f5u3psfhbwscasajkn324igtupn3blop/compiler/2024.1/bin/ifx
extra_rpaths:
- /home/software/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeh/linux-amzn2-x86_64_v3/gcc-7.3.1/gcc-12.4.0-pttzchh7o54nhmycj4wgzw5mic6rk2nb/lib64
gettext:
# Newer gettext cannot build with gcc@12 and old AL2 glibc headers
# Older gettext versions do not build correctly with oneapi.

31
share/spack/gitlab/cloud_pipelines/stacks/build_systems/spack.yaml
View File

@ -2,25 +2,22 @@ spack:
view: false
packages:
all:
require: target=x86_64_v3
definitions:
- default_specs:
- 'uncrustify build_system=autotools'
- 'uncrustify build_system=cmake'
- lz4 # MakefilePackage
- mpich~fortran # AutotoolsPackage
- py-setuptools # PythonPackage
- openjpeg # CMakePackage
- r-rcpp # RPackage
- ruby-rake # RubyPackage
- perl-data-dumper # PerlPackage
- arch:
- '%gcc'
require:
- target=x86_64_v3
c:
require:
- gcc
specs:
- matrix:
- - $default_specs
- - $arch
- 'uncrustify build_system=autotools'
- 'uncrustify build_system=cmake'
- lz4 # MakefilePackage
- mpich~fortran # AutotoolsPackage
- py-setuptools # PythonPackage
- openjpeg # CMakePackage
- r-rcpp # RPackage
- ruby-rake # RubyPackage
- perl-data-dumper # PerlPackage
cdash:
build-group: Build Systems

134
share/spack/gitlab/cloud_pipelines/stacks/developer-tools-x86_64_v3-linux-gnu/spack.yaml
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@ -1,80 +1,78 @@
spack:
view: false
packages:
all:
require: target=x86_64_v3
require:
- target=x86_64_v3
prefer:
- '%gcc'
concretizer:
unify: true
reuse: false
definitions:
- default_specs:
# editors
- neovim~no_luajit
- py-pynvim
- emacs+json+native+treesitter # note, pulls in gcc
# - tree-sitter is a dep, should also have cli but no package
- nano # just in case
# tags and scope search helpers
- universal-ctags # only maintained ctags, works better with c++
- direnv
# runtimes and compilers
- python
- llvm+link_llvm_dylib~lld~lldb~polly+python build_type=MinSizeRel # for clangd, clang-format
- node-js # for editor plugins etc., pyright language server
- npm
- cmake
- libtool
- go # to build fzf, gh, hub
- rust+dev # fd, ripgrep, hyperfine, exa, rust-analyzer
- binutils+ld+gold+plugins # support linking with built gcc
# styling and lints
- astyle
- cppcheck
- uncrustify
- py-fprettify
- py-fortran-language-server
- py-python-lsp-server
# cli dev tools
- ripgrep
- gh
- fd
# - bfs # liburing: /usr/include/linux/ipv6.h:19:8: error: redefinition of 'struct in6_pktinfo'
- fzf
- tree
- jq
- py-yq
- hub
- ncdu
- eza
- lsd
- hyperfine
- htop
- tmux
- ccache
# ensure we can use a jobserver build and do this fast
- gmake
- ninja # should be @kitware, can't be because of meson requirement
- openssl certs=system # must be this, system external does not work
- libtree
- patchelf
- sed
- which
- elfutils
- fontconfig
- font-util
- gdb
- flex
- graphviz
- doxygen
- meson
- arch:
- '%gcc target=x86_64_v3'
specs:
- matrix:
- - $default_specs
- - $arch
# editors
- neovim~no_luajit
- py-pynvim
# FIXME (compiler as nodes): recover dependency on gcc as a library when +native
- emacs+json~native+treesitter # note, pulls in gcc
# - tree-sitter is a dep, should also have cli but no package
- nano # just in case
# tags and scope search helpers
- universal-ctags # only maintained ctags, works better with c++
- direnv
# runtimes and compilers
- python
- llvm+link_llvm_dylib~lld~lldb~polly+python build_type=MinSizeRel # for clangd, clang-format
- node-js # for editor plugins etc., pyright language server
- npm
- cmake
- libtool
- go # to build fzf, gh, hub
- rust+dev # fd, ripgrep, hyperfine, exa, rust-analyzer
- binutils+ld+gold+plugins # support linking with built gcc
# styling and lints
- astyle
- cppcheck
- uncrustify
- py-fprettify
- py-fortran-language-server
- py-python-lsp-server
# cli dev tools
- ripgrep
- gh
- fd
# - bfs # liburing: /usr/include/linux/ipv6.h:19:8: error: redefinition of 'struct in6_pktinfo'
- fzf
- tree
- jq
- py-yq
- hub
- ncdu
- eza
- lsd
- hyperfine
- htop
- tmux
- ccache
# ensure we can use a jobserver build and do this fast
- gmake
- ninja # should be @kitware, can't be because of meson requirement
- openssl certs=system # must be this, system external does not work
- libtree
- patchelf
- sed
- which
- elfutils
- fontconfig
- font-util
- gdb
- flex
- graphviz
- doxygen
- meson
ci:
pipeline-gen:

13
share/spack/gitlab/cloud_pipelines/stacks/e4s-cray-rhel/spack.yaml
View File

@ -14,10 +14,15 @@ spack:
packages:
all:
require: "%cce@18.0.0 target=x86_64_v3"
compiler: [cce]
require:
- target=x86_64_v3
prefer:
- "%cce"
providers:
blas: [cray-libsci]
c: [cce]
cxx: [cce]
fortran: [cce]
lapack: [cray-libsci]
mpi: [cray-mpich]
tbb: [intel-tbb]
@ -140,8 +145,8 @@ spack:
# - gptune # py-scipy: meson.build:82:0: ERROR: Unknown compiler(s): [['/home/gitlab-runner-3/builds/dWfnZWPh/0/spack/spack/lib/spack/env/cce/ftn']]
# - hpctoolkit # dyninst requires %gcc
# - hpx max_cpu_count=512 networking=mpi # libxcrypt-4.4.35
# - lammps # lammps-20240829.1: Reversed (or previously applied) patch detected! Assume -R? [n]
# - libpressio +bitgrooming +bzip2 ~cuda ~cusz +fpzip +hdf5 +libdistributed +lua +openmp +python +sz +sz3 +unix +zfp +json +remote +netcdf +mgard # mgard:
# - lammps # lammps-20240829.1: Reversed (or previously applied) patch detected! Assume -R? [n]
# - libpressio +bitgrooming +bzip2 ~cuda ~cusz +fpzip +hdf5 +libdistributed +lua +openmp +python +sz +sz3 +unix +zfp +json +remote +netcdf +mgard # mgard:
# - mgard +serial +openmp +timing +unstructured ~cuda # mgard
# - nrm # py-scipy: meson.build:82:0: ERROR: Unknown compiler(s): [['/home/gitlab-runner-3/builds/dWfnZWPh/0/spack/spack/lib/spack/env/cce/ftn']]
# - nvhpc # requires %gcc

23
share/spack/gitlab/cloud_pipelines/stacks/e4s-power/spack.yaml
View File

@ -7,8 +7,9 @@ spack:
packages:
all:
require: "%gcc@9.4.0 target=ppc64le"
compiler: [gcc@9.4.0]
prefer:
- "%gcc@9.4.0"
- target=ppc64le
providers:
blas: [openblas]
mpi: [mpich]
@ -31,19 +32,25 @@ spack:
mpi:
require: mpich
mpich:
require: '~wrapperrpath ~hwloc %gcc@9.4.0 target=ppc64le'
require:
- '~wrapperrpath ~hwloc'
ncurses:
require: '@6.3 +termlib %gcc@9.4.0 target=ppc64le'
require:
- '@6.3 +termlib'
faodel:
require: "~tcmalloc %gcc@9.4.0 target=ppc64le"
require:
- "~tcmalloc"
tbb:
require: intel-tbb
vtk-m:
require: "+examples %gcc@9.4.0 target=ppc64le"
require:
- "+examples"
cuda:
require: "@11.4.4 %gcc@9.4.0 target=ppc64le"
require:
- "@11.4.4"
paraview:
require: "+examples %gcc@9.4.0 target=ppc64le"
require:
- "+examples"
specs:

7
share/spack/gitlab/cloud_pipelines/stacks/e4s-rocm-external/spack.yaml
View File

@ -7,7 +7,8 @@ spack:
packages:
all:
require: '%gcc target=x86_64_v3'
require:
- 'target=x86_64_v3'
providers:
blas: [openblas]
variants: +mpi
@ -21,7 +22,9 @@ spack:
variants: threads=openmp
paraview:
# Don't build GUI support or GLX rendering for HPC/container deployments
require: "@5.11 +examples ~qt ^[virtuals=gl] osmesa %gcc target=x86_64_v3"
require:
- "@5.11 +examples ~qt ^[virtuals=gl] osmesa"
- 'target=x86_64_v3'
# ROCm
comgr:

66
share/spack/gitlab/cloud_pipelines/stacks/radiuss/spack.yaml
View File

@ -2,48 +2,40 @@ spack:
view: false
packages:
all:
require: target=x86_64_v3
require:
- target=x86_64_v3
- '%gcc@7.5.0'
providers:
mpi: [mvapich2]
definitions:
#- compilers: ['%gcc@8.3.1', '%clang@10.0.0']
- compilers: ['%gcc@7.5.0']
# Note skipping spot since no spack package for it
- radiuss:
- ascent # ^conduit@0.6.0
- axom
- blt
- caliper
- care # ~benchmarks ~examples ~tests
- chai # ~examples
- conduit # ^hdf5+shared
- flux-core
#- flux-sched
- hypre
- lbann
- lvarray ~tests # per Spack issue #23192 # ~examples
- mfem
- py-hatchet
- py-maestrowf
- py-merlin
- py-shroud
- raja # ~examples # ~tests
- raja-perf
- samrai
- scr
- sundials
- umpire # ~openmp
#- visit # ^mesa-glu@9.0.0
- xbraid
- zfp
specs:
- matrix:
- [$radiuss]
- [$compilers]
- ascent # ^conduit@0.6.0
- axom
- blt
- caliper
- care # ~benchmarks ~examples ~tests
- chai # ~examples
- conduit # ^hdf5+shared
- flux-core
# - flux-sched
- hypre
- lbann
- lvarray ~tests # per Spack issue #23192 # ~examples
- mfem
- py-hatchet
- py-maestrowf
- py-merlin
- py-shroud
- raja # ~examples # ~tests
- raja-perf
- samrai
- scr
- sundials
- umpire # ~openmp
# - visit # ^mesa-glu@9.0.0
- xbraid
- zfp
cdash:
build-group: RADIUSS

2
share/spack/gitlab/cloud_pipelines/stacks/windows-vis/spack.yaml
View File

@ -6,7 +6,7 @@
spack:
view: false
specs:
- vtk~mpi
- vtk@9~mpi
cdash:
build-group: Windows Visualization (Kitware)