zhangyiss/spack
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

bioconductor update (#5786)

Browse Source 
* r-a4: Add r dependency and update url.

* r-a4base: Add r dependency and update url.

* r-a4classif: update url and add r dependency.

* r-a4core: Update url and add r dependency.

* r-a4preproc: Update url and add r dependency.

* r-a4reporting: Update url and add r dependency.

* r-abaenrichment: Update url and add r dependency.

* r-absseq: Update url and add r dependency.

* r-acgh: Update url and add r dependency.

* r-acme: Update url and add r dependency.

* r-adsplit: Update url and add r dependency.

* r-affxparser: Update url and add r dependency.

* r-affycomp: Update url and add r dependency.

* r-affycompatible: Update url and add r dependency.

* r-affycontam: Update url and add r dependency.

* r-annaffy: Update url and add r dependency.

* r-annotate: Update url and add r dependency.

* r-annotate: Update url and add r dependency.

* r-annotationdbi: Update url and add r dependency.

* r-genefilter: Update url and add r dependency.

* r-mlinterfaces: Update url and add r dependency.

* r-limma: Update url and add r dependency.

* r-multtest: Update url and add r dependency.

* r-a4classif: Correct format.

* r-affycomp: Correct error.
This commit is contained in:
lingnanyuan
2017-10-24 04:19:19 -05:00
committed by Todd Gamblin
parent f9f0c1472f
commit 420048350f
22 changed files with 71 additions and 47 deletions
Download Patch File Download Diff File Expand all files Collapse all files

5
var/spack/repos/builtin/packages/r-annotationdbi/package.py
View File

@@ -32,10 +32,11 @@ class RAnnotationdbi(RPackage):
annotation data packages using SQLite data storage."""
homepage = "https://www.bioconductor.org/packages/AnnotationDbi/"
url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/AnnotationDbi_1.38.2.tar.gz"
url = "https://git.bioconductor.org/packages/AnnotationDbi"
list_url = homepage
version('1.38.2', 'aea4a5cd1f752b59cb9f4a8dcca05734')
version('1.38.2', git='https://git.bioconductor.org/packages/AnnotationDbi', commit='67d46facba8c15fa5f0eb47c4e39b53dbdc67c36')
depends_on('r@3.4.0:3.4.9', when='@1.38.2')
depends_on('r-biocgenerics', type=('build', 'run'))
depends_on('r-biobase', type=('build', 'run'))
depends_on('r-iranges', type=('build', 'run'))