packages: remove packages that are no longer fetchable
These packages have either been retired or are no longer retrievable from any site we can find. They also aren't needed by other packages, so we're removing them from Spack. - allinea-reports: is now arm performance reports - globus-toolkit: retired, globus is now a paid service. - uberftp: used globus-toolkit, github site is retired. - mpiblast: site is dead; no longer fetchable. - py-mxnet: site and github are gone - soap2, soapindel, soapsnp: site is gone, unfetchable - arlecore: could not verify md5 securely
This commit is contained in:
Todd Gamblin
parent
00f91ab22b
commit
45a9cfcdd7
@ -1,33 +0,0 @@
|
||||
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class AllineaReports(Package):
|
||||
"""Allinea Performance Reports are the most effective way to characterize
|
||||
and understand the performance of HPC application runs. One single-page
|
||||
HTML report elegantly answers a range of vital questions for any HPC site
|
||||
"""
|
||||
|
||||
homepage = "http://www.allinea.com/products/allinea-performance-reports"
|
||||
|
||||
version('6.0.4', '3f13b08a32682737bc05246fbb2fcc77')
|
||||
|
||||
# Licensing
|
||||
license_required = True
|
||||
license_comment = '#'
|
||||
license_files = ['licences/Licence']
|
||||
license_vars = ['ALLINEA_LICENCE_FILE', 'ALLINEA_LICENSE_FILE']
|
||||
license_url = 'http://www.allinea.com/user-guide/reports/Installation.html'
|
||||
|
||||
def url_for_version(self, version):
|
||||
# TODO: add support for other architectures/distributions
|
||||
url = "http://content.allinea.com/downloads/"
|
||||
return url + "allinea-reports-%s-Redhat-6.0-x86_64.tar" % version
|
||||
|
||||
def install(self, spec, prefix):
|
||||
textinstall = Executable('./textinstall.sh')
|
||||
textinstall('--accept-licence', prefix)
|
||||
@ -1,20 +0,0 @@
|
||||
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Arlecore(Package):
|
||||
"""An Integrated Software for Population Genetics Data Analysis"""
|
||||
|
||||
homepage = "http://cmpg.unibe.ch/software/arlequin35/"
|
||||
url = "http://cmpg.unibe.ch/software/arlequin35/linux/arlecore_linux.zip"
|
||||
|
||||
version('3.5.2.2', '347a589fc609f359eb61557a2e8ceb2f')
|
||||
|
||||
depends_on('r', type=('build', 'run'))
|
||||
|
||||
def install(self, spec, prefix):
|
||||
install_tree('.', prefix)
|
||||
@ -1,20 +0,0 @@
|
||||
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class GlobusToolkit(AutotoolsPackage):
|
||||
"""The Globus Toolkit is an open source software toolkit used for building
|
||||
grids"""
|
||||
|
||||
homepage = "http://toolkit.globus.org"
|
||||
url = "http://toolkit.globus.org/ftppub/gt6/installers/src/globus_toolkit-6.0.1506371041.tar.gz"
|
||||
|
||||
version('6.0.1506371041', 'e17146f68e03b3482aaea3874d4087a5')
|
||||
version('6.0.1493989444', '9e9298b61d045e65732e12c9727ceaa8')
|
||||
|
||||
depends_on('pkgconfig', type='build')
|
||||
depends_on('openssl')
|
||||
@ -1,182 +0,0 @@
|
||||
diff -rwu mpiblast-1.6.0/ncbi/corelib/ncbienv.c mpiblast-1.6.0-patched/ncbi/corelib/ncbienv.c
|
||||
--- mpiblast-1.6.0/ncbi/corelib/ncbienv.c 2009-11-22 01:17:48.000000000 -0500
|
||||
+++ mpiblast-1.6.0-patched/ncbi/corelib/ncbienv.c 2011-08-06 17:10:08.000000000 -0400
|
||||
@@ -1932,7 +1932,7 @@
|
||||
static char **targv = NULL;
|
||||
|
||||
|
||||
-#if defined(WIN_MAC)
|
||||
+#if defined(WIN_MAC) || defined(OS_UNIX_DARWIN)
|
||||
static FSSpec apFileSpec;
|
||||
static Str255 apName;
|
||||
static Handle apParam;
|
||||
@@ -2047,7 +2047,7 @@
|
||||
}
|
||||
}
|
||||
#endif /* defined(OS_UNIX_DARWIN) */
|
||||
-#endif /* defined(WIN_MAC) */
|
||||
+#endif /* defined(WIN_MAC) || defined(OS_UNIX_DARWIN) */
|
||||
|
||||
|
||||
#if defined(OS_MSWIN) || defined(OS_VMS)
|
||||
diff -rwu mpiblast-1.6.0/ncbi/make/makedis.csh mpiblast-1.6.0-patched/ncbi/make/makedis.csh
|
||||
--- mpiblast-1.6.0/ncbi/make/makedis.csh 2010-06-28 21:04:36.000000000 -0400
|
||||
+++ mpiblast-1.6.0-patched/ncbi/make/makedis.csh 2011-08-06 17:06:42.000000000 -0400
|
||||
@@ -1,6 +1,6 @@
|
||||
#!/bin/csh -f
|
||||
#
|
||||
-# $Id: makedis.csh 148594 2008-12-30 15:11:36Z ucko $
|
||||
+# $Id: makedis.csh 179886 2010-01-04 17:28:02Z ucko $
|
||||
#
|
||||
## PUBLIC DOMAIN NOTICE
|
||||
# National Center for Biotechnology Information
|
||||
@@ -54,7 +54,7 @@
|
||||
endif
|
||||
|
||||
ls -l $tar_file
|
||||
- tar xvf $tar_file
|
||||
+ tar xf $tar_file
|
||||
else
|
||||
# make sure that ncbi/build directory exists
|
||||
if ( ! -d "ncbi/build" ) then
|
||||
@@ -74,6 +74,7 @@
|
||||
set HAVE_MAC=0
|
||||
#we will try to build OpenGL version of vibrant
|
||||
set HAVE_OGL=1
|
||||
+set MPBL_HAVE_MAC=0
|
||||
|
||||
switch ($os)
|
||||
case SunOS:
|
||||
@@ -164,7 +165,7 @@
|
||||
gcc -v
|
||||
switch (`uname -m`)
|
||||
case "ia64":
|
||||
- if (-e `which ecc`) then
|
||||
+ if (-e `which icc`) then
|
||||
set platform=linux_ecc
|
||||
else
|
||||
set platform=linux
|
||||
@@ -253,7 +254,11 @@
|
||||
endif
|
||||
endif
|
||||
set HAVE_MOTIF=0
|
||||
- set HAVE_MAC=1
|
||||
+#MPIBLAST <<<
|
||||
+# set HAVE_MAC=1
|
||||
+ set MPBL_HAVE_MAC=1
|
||||
+ set HAVE_MAC=0
|
||||
+#MPIBLAST
|
||||
breaksw
|
||||
case NetBSD:
|
||||
set platform=netbsd
|
||||
@@ -319,6 +324,7 @@
|
||||
goto BADPLATFORM
|
||||
endif
|
||||
|
||||
+
|
||||
set noglob
|
||||
# take the file $NCBI_DOT_MK and convert it to be suitable for csh eval:
|
||||
# (1) remove comments at the beginning of the lines
|
||||
@@ -328,6 +334,7 @@
|
||||
eval `sed -e 's/^ *#.*//g' -e 's/\$(\([a-zA-Z_]*\))/\${\1}/g' -e 's/ *= */=/g' -e 's/^\([^=]*\)=\(.*\)$/setenv \1 "\2";/' < $NCBI_DOT_MK`
|
||||
unset noglob
|
||||
|
||||
+
|
||||
# disable assert() unless ENABLE_ASSERT is set
|
||||
if ("$?ENABLE_ASSERT" == 0) then
|
||||
set NCBI_OPTFLAG="-DNDEBUG $NCBI_OPTFLAG"
|
||||
@@ -441,13 +448,23 @@
|
||||
set NET_VIB=(VIB=\"blastcl3 taxblast idfetch bl2seq asn2gb tbl2asn gene2xml $NONVIBWWWBLAST \")
|
||||
endif
|
||||
|
||||
+# MPIBLAST <<<<<
|
||||
+if ("$MPBL_HAVE_MAC" == 1) then
|
||||
+set CMD='make $MFLG \
|
||||
+ CFLAGS1=\"-I/Developer/Headers/FlatCarbon $NCBI_OPTFLAG $NCBI_CFLAGS1 $OGL_INCLUDE $PNG_INCLUDE\" \
|
||||
+ LDFLAGS1=\"$NCBI_LDFLAGS1\" OTHERLIBS=\"$NCBI_OTHERLIBS\" \
|
||||
+ SHELL=\"$NCBI_MAKE_SHELL\" LCL=\"$NCBI_DEFAULT_LCL\" \
|
||||
+ RAN=\"$NCBI_RANLIB\" AR=\"$NCBI_AR\" CC=\"$NCBI_CC\" $ALL_VIB all'
|
||||
+else
|
||||
set CMD='make $MFLG \
|
||||
CFLAGS1=\"$NCBI_OPTFLAG $NCBI_CFLAGS1 $OGL_INCLUDE $PNG_INCLUDE\" \
|
||||
LDFLAGS1=\"$NCBI_LDFLAGS1\" OTHERLIBS=\"$NCBI_OTHERLIBS\" \
|
||||
SHELL=\"$NCBI_MAKE_SHELL\" LCL=\"$NCBI_DEFAULT_LCL\" \
|
||||
RAN=\"$NCBI_RANLIB\" AR=\"$NCBI_AR\" CC=\"$NCBI_CC\" $ALL_VIB all'
|
||||
+endif
|
||||
eval echo $CMD
|
||||
eval echo $CMD | sh
|
||||
+# MPIBLAST >>>>>
|
||||
|
||||
set make_stat = $status
|
||||
|
||||
@@ -463,12 +480,18 @@
|
||||
endif
|
||||
|
||||
# MPIBLAST <<<<<
|
||||
-
|
||||
+if ("$MPBL_HAVE_MAC" == 1) then
|
||||
set CMD='make $MFLG -f makempiblast.unx CFLAGS1=\"$NCBI_OPTFLAG $NCBI_CFLAGS1\" \
|
||||
LDFLAGS1=\"$NCBI_LDFLAGS1\" SHELL=\"$NCBI_MAKE_SHELL\" \
|
||||
LCL=\"$NCBI_DEFAULT_LCL\" RAN=\"$NCBI_RANLIB\" AR=\"$NCBI_AR\" CC=\"$NCBI_CC\"'
|
||||
+else
|
||||
+set CMD='make $MFLG -f makempiblast.unx CFLAGS1=\"$NCBI_OPTFLAG $NCBI_CFLAGS1\" \
|
||||
+ LDFLAGS1=\"$NCBI_LDFLAGS1\" SHELL=\"$NCBI_MAKE_SHELL\" \
|
||||
+ LCL=\"$NCBI_DEFAULT_LCL\" RAN=\"$NCBI_RANLIB\" AR=\"$NCBI_AR\" CC=\"$NCBI_CC\"'
|
||||
+endif
|
||||
eval echo $CMD
|
||||
eval echo $CMD | sh
|
||||
+if ($status != 0) exit $status
|
||||
|
||||
if( "$platform" == "bluegenel" || "$platform" == "bluegenep" ) then
|
||||
exit 0
|
||||
@@ -476,7 +499,7 @@
|
||||
# MPIBLAST >>>>>
|
||||
|
||||
set CMD='make $MFLG -f makedemo.unx CFLAGS1=\"$NCBI_OPTFLAG $NCBI_CFLAGS1\" \
|
||||
- LDFLAGS1=\"$NCBI_LDFLAGS1\" SHELL=\"$NCBI_MAKE_SHELL\" \
|
||||
+ LDFLAGS1=\"$NCBI_LDFLAGS1\" SHELL=\"$NCBI_MAKE_SHELL\" OTHERLIBS=\"$NCBI_OTHERLIBS\" \
|
||||
LCL=\"$NCBI_DEFAULT_LCL\" RAN=\"$NCBI_RANLIB\" AR=\"$NCBI_AR\" CC=\"$NCBI_CC\" $DEMO_VIB'
|
||||
eval echo $CMD
|
||||
eval echo $CMD | sh
|
||||
@@ -495,7 +518,7 @@
|
||||
|
||||
|
||||
set CMD='make $MFLG -f makedemo.unx CFLAGS1=\"$NCBI_OPTFLAG $NCBI_CFLAGS1\" \
|
||||
- LDFLAGS1=\"$NCBI_LDFLAGS1\" SHELL=\"$NCBI_MAKE_SHELL\" \
|
||||
+ LDFLAGS1=\"$NCBI_LDFLAGS1\" SHELL=\"$NCBI_MAKE_SHELL\" OTHERLIBS=\"$NCBI_OTHERLIBS\" \
|
||||
LCL=\"$NCBI_DEFAULT_LCL\" RAN=\"$NCBI_RANLIB\" AR=\"$NCBI_AR\" CC=\"$NCBI_CC\" \
|
||||
THREAD_OBJ=$NCBI_THREAD_OBJ THREAD_OTHERLIBS=\"$NCBI_MT_OTHERLIBS\" \
|
||||
$DEMO_VIB $mtapps'
|
||||
diff -rwu mpiblast-1.6.0/src/Makefile.am mpiblast-1.6.0-patched/src/Makefile.am
|
||||
--- mpiblast-1.6.0/src/Makefile.am 2009-11-22 01:17:48.000000000 -0500
|
||||
+++ mpiblast-1.6.0-patched/src/Makefile.am 2011-08-06 17:06:42.000000000 -0400
|
||||
@@ -2,7 +2,7 @@
|
||||
-D_LARGEFILE64_SOURCE -DMPIBLAST_PIO \
|
||||
-I$(top_srcdir)/include/ -I@CONFIG_NCBIDIR@/include/ $(MPE_INCS) \
|
||||
-I@CONFIG_NCBIDIR@/corelib/
|
||||
-AM_CXXFLAGS = -DMPICH_IGNORE_CXX_SEEK -DINSTALL_PREFIX="\"@prefix@\"" \
|
||||
+AM_CXXFLAGS = -DMPICH_IGNORE_CXX_SEEK -DOMPI_SKIP_MPICXX -DINSTALL_PREFIX="\"@prefix@\"" \
|
||||
@COMPILE_FLAGS@ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE \
|
||||
-I$(top_srcdir)/include/ -I@CONFIG_NCBIDIR@/include/ $(MPE_INCS) \
|
||||
-I@CONFIG_NCBIDIR@/corelib/
|
||||
@@ -31,7 +31,7 @@
|
||||
@CONFIG_NCBIDIR@/build/blast_hooks.o -lmyncbitool -lblastcompadj -lmyncbiobj \
|
||||
-lmyncbi -L. -L@CONFIG_NCBIDIR@/lib/ $(MPE_LIBS) -lm @LINK_FLAGS@
|
||||
mpiblast_DEPENDENCIES = @GETOPT_LONG_SYSTEM@
|
||||
-mpiblast_CPPFLAGS = -DUSING_MPI -DMPICH_IGNORE_CXX_SEEK
|
||||
+mpiblast_CPPFLAGS = -DUSING_MPI -DMPICH_IGNORE_CXX_SEEK -DOMPI_SKIP_MPICXX
|
||||
|
||||
mpiformatdb_SOURCES = mpiformatdb.cpp mpiblast_config.cpp mpiblast_config.hpp \
|
||||
file_util.cpp file_util.hpp mpiblast_util.cpp mpiblast_util.hpp \
|
||||
diff -rwu mpiblast-1.6.0/src/pio_intercept.h mpiblast-1.6.0-patched/src/pio_intercept.h
|
||||
--- mpiblast-1.6.0/src/pio_intercept.h 2009-11-22 01:17:48.000000000 -0500
|
||||
+++ mpiblast-1.6.0-patched/src/pio_intercept.h 2011-08-06 17:06:42.000000000 -0400
|
||||
@@ -60,7 +60,7 @@
|
||||
#include <txalign.h>
|
||||
|
||||
/* marcros are duplicated in ncbi files to avoid header file conflict */
|
||||
-#define CHECK_NULPTR(x) if(x==NULL) fprintf(stderr, "%s, line%d: cannot allocate enough memory\n", __FILE__, __LINE__);
|
||||
+#define CHECK_NULPTR(x) if(x==NULL) { perror("Cannot allocate enough memory:"); exit(-1); }
|
||||
|
||||
#ifndef NO_MPI
|
||||
typedef struct _output_record {
|
||||
@ -1,32 +0,0 @@
|
||||
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Mpiblast(AutotoolsPackage):
|
||||
"""mpiBLAST is a freely available, open-source, parallel implementation of
|
||||
NCBI BLAST"""
|
||||
|
||||
homepage = "http://www.mpiblast.org/"
|
||||
url = "http://www.mpiblast.org/downloads/files/mpiBLAST-1.6.0.tgz"
|
||||
|
||||
version('1.6.0', '707105ccd56825db776b50bfd81cecd5')
|
||||
|
||||
patch('mpiBLAST-1.6.0-patch-110806')
|
||||
|
||||
depends_on('mpi')
|
||||
|
||||
def configure_args(self):
|
||||
args = ['--with-mpi=%s' % self.spec['mpi'].prefix]
|
||||
return args
|
||||
|
||||
def build(self, spec, prefix):
|
||||
make('ncbi')
|
||||
make()
|
||||
|
||||
def setup_environment(self, spack_env, run_env):
|
||||
spack_env.set('ac_cv_path_CC', self.spec['mpi'].mpicc)
|
||||
spack_env.set('ac_cv_path_CXX', self.spec['mpi'].mpicxx)
|
||||
@ -1,39 +0,0 @@
|
||||
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class PyMxnet(PythonPackage):
|
||||
"""Python binding for DMLC/MXNet."""
|
||||
|
||||
homepage = "http://mxnet.io"
|
||||
url = "https://github.com/sjtuhpcc/python-mxnet/archive/0.10.0.post2.tar.gz"
|
||||
|
||||
version('0.10.0.post2', '64a646fbf5d1b53ce1008da1bf94d77c',
|
||||
url='https://github.com/sjtuhpcc/python-mxnet/archive/0.10.0.post2.tar.gz')
|
||||
|
||||
# TODO
|
||||
# install_time_test_callbacks = ['install_test', 'import_module_test']
|
||||
|
||||
# import_modules = ['mxnet', 'mxnet.module', 'mxnet._ctypes', 'mxnet.rnn',
|
||||
# 'mxnet._cy2', 'mxnet._cy3', 'mxnet.notebook', 'mxnet.contrib']
|
||||
|
||||
variant('cuda', default=False, description='Enable CUDA support')
|
||||
|
||||
depends_on('python@2.6:2.8,3.3:')
|
||||
|
||||
depends_on('py-setuptools', type=('build', 'run'))
|
||||
depends_on('py-numpy@1.7.1:', type=('build', 'run'))
|
||||
# depends_on('py-pip', type='build')
|
||||
|
||||
depends_on('mxnet', type=('build', 'run'))
|
||||
depends_on('mxnet+cuda', when='+cuda', type=('build', 'run'))
|
||||
|
||||
def patch(self):
|
||||
spec = self.spec
|
||||
filter_file('../../../',
|
||||
spec['mxnet'].prefix.lib,
|
||||
'mxnet/libinfo.py', string=True)
|
||||
@ -1,23 +0,0 @@
|
||||
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Soap2(Package):
|
||||
"""Software for short oligonucleotide alignment."""
|
||||
|
||||
homepage = "http://soap.genomics.org.cn/soapaligner.html"
|
||||
url = "http://soap.genomics.org.cn/down/soap2.21release.tar.gz"
|
||||
|
||||
version('2.21', '563b8b7235463b68413f9e841aa40779')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
mkdirp(prefix.bin)
|
||||
mkdirp(prefix.share.man)
|
||||
install('soap', prefix.bin)
|
||||
install('2bwt-builder', prefix.bin)
|
||||
install('soap.1', prefix.share.man)
|
||||
install('soap.man', prefix.share.man)
|
||||
@ -1,34 +0,0 @@
|
||||
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Soapindel(MakefilePackage):
|
||||
"""SOAPindel is focusing on calling indels from the next-generation
|
||||
paired-end sequencing data."""
|
||||
|
||||
homepage = "http://soap.genomics.org.cn/soapindel.html"
|
||||
|
||||
version('2.1.7.17', '317ef494173969cdc6a8244dd87d06bd',
|
||||
url='http://soap.genomics.org.cn/down/SOAPindel_20130918_2.1.7.17.zip')
|
||||
|
||||
depends_on('perl', type=('build', 'run'))
|
||||
|
||||
build_directory = 'indel_detection.release'
|
||||
|
||||
def install(self, spec, prefix):
|
||||
with working_dir('indel_detection.release'):
|
||||
install_tree('tools', prefix.tools)
|
||||
mkdirp(prefix.lib)
|
||||
install('affine_align.pm', prefix.lib)
|
||||
install('indel_lib.pm', prefix.lib)
|
||||
mkdirp(prefix.bin)
|
||||
install('assemble_align', prefix.bin)
|
||||
install('cluster_reads', prefix.bin)
|
||||
|
||||
def setup_environment(self, spack_env, run_env):
|
||||
run_env.prepend_path('PERL5LIB', self.prefix.lib)
|
||||
run_env.prepend_path('PATH', self.prefix.tools)
|
||||
@ -1,23 +0,0 @@
|
||||
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Soapsnp(MakefilePackage):
|
||||
"""SOAPsnp uses a method based on Bayes' theorem (the reverse probability
|
||||
model) to call consensus genotype by carefully considering the data
|
||||
quality, alignment, and recurring experimental errors."""
|
||||
|
||||
homepage = "http://soap.genomics.org.cn/soapsnp.html"
|
||||
url = "http://soap.genomics.org.cn/down/SOAPsnp-v1.03.tar.gz"
|
||||
|
||||
version('1.03', '8d69e196013657357ff840b611762ebc')
|
||||
|
||||
depends_on('boost')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
mkdirp(prefix.bin)
|
||||
install('soapsnp', prefix.bin)
|
||||
@ -1,19 +0,0 @@
|
||||
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Uberftp(AutotoolsPackage):
|
||||
"""UberFTP is an interactive (text-based) client for GridFTP"""
|
||||
|
||||
homepage = "http://toolkit.globus.org/grid_software/data/uberftp.php"
|
||||
url = "https://github.com/JasonAlt/UberFTP/archive/Version_2_8.tar.gz"
|
||||
|
||||
version('2_8', sha256='8a397d6ef02bb714bb0cbdb259819fc2311f5d36231783cd520d606c97759c2a')
|
||||
version('2_7', sha256='29a111a86fa70dbbc529a5d3e5a6befc1681e64e32dc019a1a6a98cd43ffb204')
|
||||
version('2_6', sha256='2823a564801fb71d06fe6fbc3a37f11962af75b33c53bf698f26776ec972fe68')
|
||||
|
||||
depends_on('globus-toolkit')
|
||||
Loading…
Reference in New Issue
Block a user