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py-crossmap: new package at 0.3.3 (#10854)

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Justin Stanley 2019-03-11 15:13:02 -05:00 committed by Peter Scheibel
parent 9425075a23
commit 46466381b8
1 changed files with 28 additions and 0 deletions
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var/spack/repos/builtin/packages/py-crossmap/package.py Normal file
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# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyCrossmap(PythonPackage):
"""CrossMap is a program for convenient conversion of genome coordinates
(or annotation files) between different assemblies"""
homepage = "http://crossmap.sourceforge.net/"
url = "https://downloads.sourceforge.net/project/crossmap/CrossMap-0.3.3.tar.gz"
version('0.3.3', sha256='56d99fd606e13e399b83438953d0d89fc281df1c1e8e47eed7d773e7ec9c88f8')
version('0.2.9', sha256='57243ee5051352c93088874c797ceac0426f249704ba897360fb628b3365d0af')
depends_on('python@3:', type=('build', 'run'), when='@0.3.0:')
depends_on('python@2.7:2.8', type=('build', 'run'), when='@:0.2.9')
depends_on('py-setuptools', type='build')
depends_on('py-numpy', type=('build', 'run'))
depends_on('py-cython', type=('build', 'run'))
depends_on('py-pysam', type=('build', 'run'))
depends_on('py-bx-python', type=('build', 'run'))
depends_on('py-pybigwig', type=('build', 'run'), when='@0.3.0:')