Add MADIS package (#38097)

* Add MADIS package
* madis update
* [@spackbot] updating style on behalf of AlexanderRichert-NOAA
* allow arg mismatch for gcc@10: for madis

var/spack/repos/builtin/packages/madis/package.py

@@ -0,0 +1,75 @@
+# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+import os
+
+from spack.package import *
+
+
+class Madis(MakefilePackage):
+    """
+    Meteorological Assimilation Data Ingest System (MADIS) is an observational
+    database and delivery system which integrates real-time observations from a
+    wide variety of observing infrastructures to make them useable for
+    numerical weather prediction models and nowcasting.
+    """
+
+    homepage = "https://madis-data.ncep.noaa.gov/"
+    url = "https://madis-data.ncep.noaa.gov/source/madis-4.3.tar.gz"
+
+    maintainers("AlexanderRichert-NOAA")
+
+    version("4.3", sha256="5d1ee9800c84e623dcf4271653aa66d17a744143e58354e70f8a0646cd6b246c")
+
+    variant("pic", default=True, description="Build with position-independent code (PIC)")
+    variant("pnetcdf", default=False, description="Build with parallel NetCDF")
+
+    depends_on("netcdf-fortran")
+    depends_on("parallel-netcdf", when="+pnetcdf")
+
+    def setup_build_environment(self, env):
+        fflags = []
+        if self.spec.satisfies("%gcc@10:"):
+            fflags += ["-fallow-argument-mismatch"]
+
+        if self.spec.satisfies("+pic"):
+            fflags += ["-fPIC"]
+
+        env.set("FFLAGS", " ".join(fflags))
+
+        ldflags = []
+        libs = []
+
+        if self.spec.satisfies("+pnetcdf"):
+            pnetcdf = self.spec["parallel-netcdf"]
+            ldflags.append(pnetcdf.libs.ld_flags)
+            libs.append(pnetcdf.libs.link_flags)
+
+        nfconfig = which(os.path.join(self.spec["netcdf-fortran"].prefix.bin, "nf-config"))
+        ldflags.append(nfconfig("--flibs", output=str).strip())
+        netcdf_f = self.spec["netcdf-fortran"]
+        env.set("NETCDF_INC", netcdf_f.prefix.include)
+
+        env.set("NETCDF_LIB", " ".join(ldflags))
+        env.set("LIBS", " ".join(libs))
+
+    def build(self, spec, prefix):
+        with working_dir("src"):
+            make("-j1")
+
+    def install(self, spec, prefix):
+        with working_dir("src"):
+            make("-j1")
+        with working_dir(self.build_directory):
+            copy_tree("bin", prefix.bin)
+            copy_tree("doc", prefix.doc)
+            copy_tree("include", prefix.include)
+            copy_tree("lib", prefix.lib)
+            copy_tree("src", prefix.src)
+            copy_tree("static", prefix.static)
+
+    def patch(self):
+        for pattern in ["NETCDF_LIB", "NETCDF_INC", "FC", "FFLAGS", "LDFLAGS"]:
+            filter_file(pattern + "=", "#" + pattern + "=", "src/makefile")