zhangyiss/spack
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

e4s oneapi: use oneapi@2023.0.0 (#34634)

Browse Source
This commit is contained in:
eugeneswalker 2023-01-29 15:22:14 -06:00 committed by GitHub
parent f576b4b6c5
commit 48a63719b2
No known key found for this signature in database
GPG Key ID: 4AEE18F83AFDEB23
3 changed files with 104 additions and 83 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

4
share/spack/gitlab/cloud_pipelines/.gitlab-ci.yml
View File

@ -332,11 +332,11 @@ e4s-protected-build:
e4s-oneapi-pr-generate:
extends: [ ".e4s-oneapi", ".pr-generate"]
image: ecpe4s/ubuntu20.04-runner-x86_64-oneapi:2022-07-01
image: ecpe4s/ubuntu20.04-runner-x86_64-oneapi:2023-01-01
e4s-oneapi-protected-generate:
extends: [ ".e4s-oneapi", ".protected-generate"]
image: ecpe4s/ubuntu20.04-runner-x86_64-oneapi:2022-07-01
image: ecpe4s/ubuntu20.04-runner-x86_64-oneapi:2023-01-01
e4s-oneapi-pr-build:
extends: [ ".e4s-oneapi", ".pr-build" ]

177
share/spack/gitlab/cloud_pipelines/stacks/e4s-oneapi/spack.yaml
View File

@ -3,7 +3,7 @@ spack:
concretizer:
reuse: false
unify: when_possible
unify: false
config:
build_jobs: 32
@ -16,37 +16,37 @@ spack:
compilers:
- compiler:
spec: dpcpp@2022.1.0
spec: dpcpp@2023.0.0
paths:
cc: /opt/intel/oneapi/compiler/2022.1.0/linux/bin/icx
cxx: /opt/intel/oneapi/compiler/2022.1.0/linux/bin/dpcpp
f77: /opt/intel/oneapi/compiler/2022.1.0/linux/bin/ifx
fc: /opt/intel/oneapi/compiler/2022.1.0/linux/bin/ifx
cc: /opt/intel/oneapi/compiler/2023.0.0/linux/bin/icx
cxx: /opt/intel/oneapi/compiler/2023.0.0/linux/bin/dpcpp
f77: /opt/intel/oneapi/compiler/2023.0.0/linux/bin/ifx
fc: /opt/intel/oneapi/compiler/2023.0.0/linux/bin/ifx
flags: {}
operating_system: ubuntu20.04
target: x86_64
modules: [compiler]
environment:
prepend_path:
LD_LIBRARY_PATH: /opt/intel/oneapi/compiler/2022.1.0/linux/compiler/lib/intel64_lin
LD_LIBRARY_PATH: /opt/intel/oneapi/compiler/2023.0.0/linux/compiler/lib/intel64_lin
extra_rpaths: []
- compiler:
spec: oneapi@2022.1.0
spec: oneapi@2023.0.0
paths:
cc: /opt/intel/oneapi/compiler/2022.1.0/linux/bin/icx
cxx: /opt/intel/oneapi/compiler/2022.1.0/linux/bin/icpx
f77: /opt/intel/oneapi/compiler/2022.1.0/linux/bin/ifx
fc: /opt/intel/oneapi/compiler/2022.1.0/linux/bin/ifx
cc: /opt/intel/oneapi/compiler/2023.0.0/linux/bin/icx
cxx: /opt/intel/oneapi/compiler/2023.0.0/linux/bin/icpx
f77: /opt/intel/oneapi/compiler/2023.0.0/linux/bin/ifx
fc: /opt/intel/oneapi/compiler/2023.0.0/linux/bin/ifx
flags: {}
operating_system: ubuntu20.04
target: x86_64
modules: [compiler]
environment:
prepend_path:
LD_LIBRARY_PATH: /opt/intel/oneapi/compiler/2022.1.0/linux/compiler/lib/intel64_lin
LD_LIBRARY_PATH: /opt/intel/oneapi/compiler/2023.0.0/linux/compiler/lib/intel64_lin
extra_rpaths: []
- compiler:
spec: gcc@9.4.0
spec: gcc@11.1.0
paths:
cc: /usr/bin/gcc
cxx: /usr/bin/g++
@ -60,20 +60,13 @@ spack:
extra_rpaths: []
packages:
adios2:
require: "%gcc"
all:
require: "%oneapi"
require: '%oneapi'
providers:
blas: [openblas]
mpi: [mpich]
target: [x86_64]
variants: +mpi
binutils:
require: "%gcc"
variants: +ld +gold +headers +libiberty ~nls
cuda:
version: [11.4.2]
elfutils:
variants: +bzip2 ~nls +xz
hdf5:
@ -82,8 +75,6 @@ spack:
variants: fabrics=sockets,tcp,udp,rxm
libunwind:
variants: +pic +xz
llvm:
require: "%gcc" # undefined reference to `_intel_fast_memset' becauase of -nodefaultlibs
mpich:
variants: ~wrapperrpath
ncurses:
@ -92,35 +83,55 @@ spack:
variants: threads=openmp
python:
version: [3.8.13]
ruby:
require: "%gcc" # https://github.com/spack/spack/issues/31954
rust:
require: "%gcc" # undefined reference becauase of -nodefaultlibs
trilinos:
variants: +amesos +amesos2 +anasazi +aztec +belos +boost +epetra +epetraext
+ifpack +ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu
+nox +piro +phalanx +rol +rythmos +sacado +stk +shards +shylu +stokhos +stratimikos
+teko +tempus +tpetra +trilinoscouplings +zoltan +zoltan2 +superlu-dist gotype=long_long
vtk-m:
require: "~openmp"
require: ~openmp
xz:
variants: +pic
mesa:
version: [21.3.8]
binutils:
require: '%gcc'
variants: +ld +gold +headers +libiberty ~nls
bison:
require: '%gcc'
krb5:
require: '%gcc'
llvm:
require: '%gcc'
m4:
require: '%gcc'
openssh:
require: '%gcc'
papi:
require: '%gcc'
py-scipy:
require: '%gcc'
ruby:
require: '%gcc'
rust:
require: '%gcc'
unzip:
require: '%gcc'
specs:
# CPU
- adios
- adios2
- alquimia
- aml
- amrex
- arborx
- archer
- argobots
- ascent
- amrex
- axom
- bolt
- bricks
- butterflypack
- cabana
- caliper
@ -129,20 +140,15 @@ spack:
- darshan-runtime
- darshan-util
- datatransferkit
- exaworks
- faodel
- flit
- flux-core
- fortrilinos
- gasnet
- ginkgo
- globalarrays
- gmp
- gotcha
- gptune
- hdf5 +fortran +hl +shared
- heffte +fftw
- hpx max_cpu_count=512 networking=mpi
- hypre
- kokkos-kernels +openmp
- kokkos +openmp
@ -160,7 +166,6 @@ spack:
- nccmp
- nco
- netlib-scalapack
- nrm
- omega-h
- openmpi
- openpmd-api
@ -174,17 +179,11 @@ spack:
- plumed
- precice
- pumi
- py-cinemasci
- py-jupyterhub
- py-libensemble
- py-petsc4py
- py-warpx ^warpx dims=2
- py-warpx ^warpx dims=3
- py-warpx ^warpx dims=rz
- qthreads scheduler=distrib
- raja
- rempi
- scr
- slate ~cuda
- slepc
- stc
@ -193,14 +192,12 @@ spack:
- superlu-dist
- superlu
- swig
- swig@4.0.2-fortran
- sz
- tasmanian
- tau +mpi +python
- trilinos@13.0.1 +amesos +amesos2 +anasazi +aztec +belos +boost +epetra +epetraext
+ifpack +ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu
+nox +piro +phalanx +rol +rythmos +sacado +stk +shards +shylu +stokhos +stratimikos
+teko +tempus +tpetra +trilinoscouplings +zoltan +zoltan2 +superlu-dist gotype=long_long
+ifpack +ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu
+nox +piro +phalanx +rol +rythmos +sacado +stk +shards +shylu +stokhos +stratimikos
+teko +tempus +tpetra +trilinoscouplings +zoltan +zoltan2 +superlu-dist gotype=long_long
- turbine
- umap
- umpire
@ -213,54 +210,72 @@ spack:
# GPU
- aml +ze
- amrex +sycl
- arborx +sycl ^kokkos +sycl +openmp std=17 +tests +examples
- cabana +sycl ^kokkos+sycl +openmp std=17 +tests +examples
- cabana +sycl ^kokkos +sycl +openmp std=17 +tests +examples
- kokkos +sycl +openmp std=17 +tests +examples %oneapi
- kokkos-kernels build_type=Release %oneapi ^kokkos +sycl +openmp std=17 +tests +examples %oneapi
- kokkos-kernels build_type=Release ^kokkos +sycl +openmp std=17 +tests +examples %oneapi
# CPU BUILD FAILURES
#- adios2@2.8.0 # adios2
#- charliecloud@0.26 # charliecloud
#- dyninst@12.1.0 # old intel-tbb
#- geopm@1.1.0 # geopm
#- h5bench@1.2 # h5bench
#- hpctoolkit # dyninst
#- phist@1.9.5 # phist
#- paraview +qt # qt
#- pruners-ninja@1.0.1 # pruners-ninja
#- variorum@0.4.1 # variorum
# CPU BUILD FAILURES - NOTES
# adios2: /usr/bin/ld: ../../lib/libadios2_fortran.so.2.8.2: version node not found for symbol adios2_adios_init_mod@adios2_adios_init_serial_smod._; /usr/bin/ld: failed to set dynamic section sizes: bad value
# CPU FAILURES
# - bricks # bricks
# - charliecloud # charliecloud
# - dyninst # old intel-tbb
# - exaworks # py-setuptools-scm
# - flux-core # py-setuptools-scm
# - geopm # geopm
# - ginkgo # ginkgo
# - gptune # py-scipy@1.3.3
# - h5bench # h5bench
# - hpctoolkit # dyninst
# - hpx max_cpu_count=512 networking=mpi # boost cxxstd=17
# - nrm # py-scipy
# - paraview +qt # qt
# - phist # phist
# - pruners-ninja # pruners-ninja
# - py-cinemasci # py-scipy@1.3.3, py-setuptools-scm
# - py-jupyterhub # py-setuptools-scm
# - py-warpx ^warpx dims=2 # py-scipy@1.5.4
# - py-warpx ^warpx dims=3 # py-scipy@1.5.4
# - py-warpx ^warpx dims=rz # py-scipy@1.5.4
# - scr # libyogrt
# - swig@4.0.2-fortran # swig
# - tau +mpi +python # tau
# - variorum # variorum
# --
# amrex: /opt/intel/oneapi/compiler/2023.0.0/linux/bin-llvm/../include/sycl/detail/defines_elementary.hpp:52:40: note: expanded from macro '__SYCL2020_DEPRECATED'
# amrex: /opt/intel/oneapi/compiler/2023.0.0/linux/bin-llvm/../include/sycl/detail/defines_elementary.hpp:52:40: note: expanded from macro '__SYCL2020_DEPRECATED'
# binutils: gold/powerpc.cc:3590: undefined reference to `gold::Sized_symbol<64>::Value_type gold::Symbol_table::compute_final_value<64>(gold::Sized_symbol<64> const*, gold::Symbol_table::Compute_final_value_status*) const'
# boost cxxstd=17: ./boost/mpl/aux_/integral_wrapper.hpp:73:31: error: integer value -1 is outside the valid range of values [0, 3] for this enumeration type [-Wenum-constexpr-conversion]
# bricks: cc1plus: error: bad value ('OFF') for '-mtune=' switch
# charliecloud: autoreconf phase: RuntimeError: configure script not found in ...
# flux-sched: include/yaml-cpp/emitter.h:164:9: error: comparison with NaN always evaluates to false in fast floating point modes [-Werror,-Wtautological-constant-compare]
# flux-sched: include/yaml-cpp/emitter.h:171:24: error: comparison with infinity always evaluates to false in fast floating point modes [-Werror,-Wtautological-constant-compare]
# ginkgo: icpx: error: clang frontend command failed with exit code 139
# h5bench: commons/h5bench_util.h:196: multiple definition of `has_vol_async';
# intel-tbb: clang++clang++clang++clang++clang++clang++clang++: : : : : : : clang++error: : unknown argument: '-flifetime-dse=1'
# libyogrt: configure: error: slurm is not in specified location!
# phist: fortran_bindings/test/kernels.F90(63): error #8284: If the actual argument is scalar, the dummy argument shall be scalar unless the actual argument is of type character or is an element of an array that is not assumed shape, pointer, or polymorphic. [ARGV]
# pruners-ninja: test/ninja_test_util.c:34: multiple definition of `a';
# py-cryptography: ??
# py-scipy@1.3.3: gcc: error: unrecognized command-line option '-fp-model=strict'
# py-scipy@1.5.4: gcc: error: unrecognized command-line option '-fp-model=strict'
# py-setuptools-scm: ??
# ruby: limits.c:415:34: error: invalid suffix 'D' on floating constant
# rust: /usr/bin/ld: /opt/intel/oneapi/compiler/2022.1.0/linux/bin-llvm/../compiler/lib/intel64_lin/libimf.a(libm_feature_flag.o): in function `__libm_feature_flag_init': libm_feature_flag.c:(.text+0x25): undefined reference to `__intel_cpu_feature_indicator_x'
# swig@4.0.2-fortran: /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.1.0/m4-1.4.19-p3otmjixpi6zibdsyoqib5dpzfshq3nj/bin/m4:/spack/opt/spack/linux-ubuntu20.04-x86_64/oneapi-2023.0.0/bison-3.8.2-xca2sot4jhd72hvj2m2b3ajchagczvau/share/bison/skeletons/yacc.c:420: undefined macro `b4_symbol(103, tag)'
# tau: Error: Unable to identify ifort lib directory
# variorum: ld: Intel/CMakeFiles/variorum_intel.dir/msr_core.c.o:(.bss+0x0): multiple definition of `g_platform'; CMakeFiles/variorum.dir/config_architecture.c.o:(.bss+0x0): first defined here
# vtk-m +openmp: clang++: error: clang frontend command failed with exit code 139 (use -v to see invocation)
# GPU BUILD FAILURES
#- ginkgo@1.4.0 +oneapi %dpcpp ^cmake%oneapi # ginkgo
#- hpctoolkit@2022.04.15 +level_zero # dyninst
#- sundials@6.2.0 +sycl cxxstd=17 # sundials
#- tau@2.31.1 +mpi +opencl +level_zero ~pdt %oneapi ^binutils%gcc@9.4.0 ^papi%gcc@9.4.0 # tau
# GPU BUILD FAILURES - NOTES
# berkeley-db %dpcpp: dpcpp: dpcpperror: : no such file or directory: '/tmp/conftest-9d8d34.o'
# ginkgo %dpcpp: CMakeTestCXXCompiler.cmake:62: /usr/bin/ld: warning: libsvml.so, needed by /opt/intel/oneapi/compiler/2022.1.0/linux/bin-llvm/../lib/libsycl.so, not found (try using -rpath or -rpath-link) ...
# ncurses %dpcpp: If you have ncurses 4.2 applications, you should read the INSTALL document, and install the terminfo without the -x optiontic: error while loading shared libraries: libsvml.so: cannot open shared object file: No such file or directory
# sundials: include/sunmemory/sunmemory_sycl.h:20:10: fatal error: 'CL/sycl.hpp' file not found
# tau: requires libdrm-dev
# GPU FAILURES
# - amrex +sycl # amrex
# - ginkgo +oneapi # ginkgo
# - hpctoolkit +level_zero # dyninst
# - sundials +sycl cxxstd=17 # sundials
# - tau +mpi +opencl +level_zero ~pdt # tau
# --
# SKIPPED
#- flecsi@1.4.2 # dependency pfunit marks oneapi as an unsupported compiler
# - flecsi # dependency pfunit marks oneapi as an unsupported compiler
mirrors: { "mirror": "s3://spack-binaries/develop/e4s-oneapi" }
@ -286,14 +301,14 @@ spack:
- if [[ -r /mnt/key/intermediate_ci_signing_key.gpg ]]; then spack gpg trust /mnt/key/intermediate_ci_signing_key.gpg; fi
- if [[ -r /mnt/key/spack_public_key.gpg ]]; then spack gpg trust /mnt/key/spack_public_key.gpg; fi
- export PATH=/bootstrap/runner/view/bin:${PATH}
- . /bootstrap/runner/install/linux-ubuntu20.04-x86_64/gcc-9.4.0/lmod-8.7.2-ri26z7qy6ixtgpsqinswx3w6tuggluv5/lmod/8.7.2/init/bash
- . /bootstrap/runner/install/linux-ubuntu20.04-x86_64/gcc-11.1.0/lmod-8.7.2-b7eq7rjeckn3m4o4lglsakilibkznjom/lmod/8.7.2/init/bash
- module use /opt/intel/oneapi/modulefiles
- module load compiler
- spack --color=always --backtrace ci rebuild > >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_out.txt) 2> >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_err.txt >&2)
after_script:
- cat /proc/loadavg || true
image: ecpe4s/ubuntu20.04-runner-x86_64-oneapi:2022-07-01
image: ecpe4s/ubuntu20.04-runner-x86_64-oneapi:2023-01-01
match_behavior: first
mappings:
@ -478,7 +493,7 @@ spack:
before_script:
- . "./share/spack/setup-env.sh"
- spack --version
image: ecpe4s/ubuntu20.04-runner-x86_64-oneapi:2022-07-01
image: ecpe4s/ubuntu20.04-runner-x86_64-oneapi:2023-01-01
tags: ["spack", "public", "x86_64"]
signing-job-attributes:

6
var/spack/repos/builtin/packages/libffi/package.py
View File

@ -37,6 +37,12 @@ def headers(self):
# The headers are probably in self.prefix.lib but we search everywhere
return find_headers("ffi", self.prefix, recursive=True)
def flag_handler(self, name, flags):
if name == "cflags":
if self.spec.satisfies("%oneapi@2023:"):
flags.append("-Wno-error=implicit-function-declaration")
return (flags, None, None)
def configure_args(self):
args = []
if self.spec.version >= Version("3.3"):