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trnascan-se: add and configure infernal dependency (#14502)

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* trnascan-se: add and configure infernal dep

* trnascan-se: use patch() for infernal config
This commit is contained in:
Justin S 2020-01-14 17:47:48 -06:00 committed by Adam J. Stewart
parent ae6afaf8e1
commit 4b1c356a27
1 changed files with 7 additions and 0 deletions
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var/spack/repos/builtin/packages/trnascan-se/package.py
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@ -13,3 +13,10 @@ class TrnascanSe(AutotoolsPackage):
url = "http://trna.ucsc.edu/software/trnascan-se-2.0.0.tar.gz" url = "http://trna.ucsc.edu/software/trnascan-se-2.0.0.tar.gz"
version('2.0.0', sha256='0dde1c07142e4bf77b21d53ddf3eeb1ef8c52248005a42323d13f8d7c798100c') version('2.0.0', sha256='0dde1c07142e4bf77b21d53ddf3eeb1ef8c52248005a42323d13f8d7c798100c')
depends_on('infernal@1.1.2', type='run', when='@2.0.0')
def patch(self):
filter_file('infernal_dir: {bin_dir}',
'infernal_dir: %s' % self.spec['infernal'].prefix.bin,
'tRNAscan-SE.conf.src', string=True)