last: new package (#4729)

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Audrey Thoma 2017-07-13 08:26:17 -05:00 committed by Adam J. Stewart
parent e257ea59c2
commit 4cbe1b338f

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##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class Last(MakefilePackage):
"""LAST finds similar regions between sequences, and aligns them. It is
designed for comparing large datasets to each other (e.g. vertebrate
genomes and/or large numbers of DNA reads)."""
homepage = "http://last.cbrc.jp/"
url = "http://last.cbrc.jp/last-869.zip"
version('869', '12dced14418fb924a1b0604593274973')
def install(self, spec, prefix):
make('install', 'prefix=%s' % prefix)