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py-mxfold2: new package at v0.1.1 (#27383)

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Desmond Orton 2021-11-15 04:07:02 -06:00 committed by GitHub
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# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyMxfold2(PythonPackage):
"""MXfold2: RNA secondary structure prediction using deep
learning with thermodynamic integration"""
homepage = "https://github.com/keio-bioinformatics/mxfold2"
url = "https://github.com/keio-bioinformatics/mxfold2/releases/download/v0.1.1/mxfold2-0.1.1.tar.gz"
maintainers = ['dorton21']
version('0.1.1', sha256='9f39c6ff4138212d1ad2639005f5c05ffb4df0f7e22f5e7ad49466a05aa047e5')
depends_on('python@3.7:', type=('build', 'run'))
depends_on('py-torch@1.7:~valgrind', type=('build', 'run'))
depends_on('py-torchvision', type=('build', 'run'))
depends_on('py-wheel@0.35.1:0.36.0', type=('build', 'run'))
depends_on('py-setuptools', type='build')
depends_on('py-setuptools-cpp', type='build')
depends_on('cmake', type='build')