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Add package for snakemake (#3605)

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* Add package for snakemake

* Flake8 cleanups

* Add package for py-wrapt

* Address PR feedback

Switch to pypi URL.

Tighten Python3 dependency spec.

Add missing dependencies (wrapt, requests).
    - add package for wrapt.
This commit is contained in:
George Hartzell
2017-03-29 12:25:09 -07:00
committed by Adam J. Stewart
parent 6138350c9e
commit 4cd4a2da46
2 changed files with 73 additions and 0 deletions
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34
var/spack/repos/builtin/packages/py-wrapt/package.py Normal file
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##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class PyWrapt(PythonPackage):
"""Module for decorators, wrappers and monkey patching."""
homepage = "https://github.com/GrahamDumpleton/wrapt"
url = "https://pypi.io/packages/source/w/wrapt/wrapt-1.10.10.tar.gz"
version('1.10.10', '97365e906afa8b431f266866ec4e2e18')

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var/spack/repos/builtin/packages/snakemake/package.py Normal file
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##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class Snakemake(PythonPackage):
"""Snakemake is an MIT-licensed workflow management system."""
homepage = "https://snakemake.readthedocs.io/en/stable/"
url = "https://pypi.io/packages/source/s/snakemake/snakemake-3.11.2.tar.gz"
version('3.11.2', '6bf834526078522b38d271fdf73e6b22')
depends_on('python@3.3:')
depends_on('py-requests', type=('build', 'run'))
depends_on('py-setuptools', type=('build', 'run'))
depends_on('py-wrapt', type=('build', 'run'))