sailfish: Create new package (#6827)

* sailfish: Create new package

* sailfish: fix tbb dependency

* sailfish: fix dependency type
This commit is contained in:
Eric 2018-01-05 15:08:45 -06:00 committed by Adam J. Stewart
parent ea6ebedd0e
commit 4cd9bdedd7

View File

@ -0,0 +1,37 @@
##############################################################################
# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class Sailfish(CMakePackage):
"""Sailfish is a tool for transcript quantification from RNA-seq data."""
homepage = "http://www.cs.cmu.edu/~ckingsf/software/sailfish"
url = "https://github.com/kingsfordgroup/sailfish/archive/v0.10.0.tar.gz"
version('0.10.1', 'e6dab4cf3a39f346df7c28f40eb58cad')
depends_on('boost@1.55:')
depends_on('tbb')