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phist: fix compatibility with python@3.11: (#40082)

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Jonas Thies 2023-09-21 20:21:35 +02:00 committed by GitHub
parent 170867e38a
commit 56df8b61a2
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2 changed files with 30 additions and 0 deletions
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2
var/spack/repos/builtin/packages/phist/package.py
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@ -153,6 +153,8 @@ class Phist(CMakePackage):
# ###################### Patches ##########################
# remove 'rU' file mode in a python script
patch("remove_rU_mode_in_python_script.patch", when="@:1.12.0 +fortran ^python@3.11:")
# Avoid trying to compile some SSE code if SSE is not available
# This patch will be part of phist 1.11.3 and greater and only affects
# the 'builtin' kernel_lib.

28
var/spack/repos/builtin/packages/phist/remove_rU_mode_in_python_script.patch Normal file
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@ -0,0 +1,28 @@
commit abef54185d43c0900bcde289a4436fea0790b9a7
Author: Jonas Thies <16190001+jthies@users.noreply.github.com>
Date: Tue Sep 19 17:42:57 2023 +0200
cfwrapper script: do not use 'rU' mode when opening a file (fixes #246)
diff --git a/fortran_bindings/cfwrapper.py.in b/fortran_bindings/cfwrapper.py.in
index 9a2539d3..60808a5d 100755
--- a/fortran_bindings/cfwrapper.py.in
+++ b/fortran_bindings/cfwrapper.py.in
@@ -264,7 +264,7 @@ for library_path in PATH_DICT:
for c_file_name in directory[2]:
if (c_file_name.find(".CFWRAPPER_SKIP.") != -1):
continue
- whole_file = open(directory[0] + "/" + c_file_name, 'rU',
+ whole_file = open(directory[0] + "/" + c_file_name, 'r',
errors='replace').read()
enum_types = re.findall("(?ms)^typedef enum.*?}\s?(\w+);", whole_file)
phist_enums += enum_types
@@ -338,7 +338,7 @@ for library_path in PATH_DICT:
if c_file_name in ["gstdio.h", "giochannel.h"]:
continue # Go to next file
- whole_file_original = open(directory[0] + "/" + c_file_name, 'rU',
+ whole_file_original = open(directory[0] + "/" + c_file_name, 'r',
errors='replace').read()
whole_file = whole_file_original
nb_files += 1