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e4s ci: use latest intel/hpckit 2024 based image (#41437)

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* e4s ci: use latest intel/hpckit 2024 based image

* use latest container image: ecpe4s/ubuntu22.04-runner-amd64-oneapi-2024.0.0:2023.12.01

* comment out failing specs

* update to use patched container

* remove generalized package preference for intel-oneapi-mkl@2023

* change packages commented out
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eugeneswalker 2024-01-20 20:17:44 -08:00 committed by GitHub
parent 104a2b5e11
commit 58997f7f9a
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2 changed files with 30 additions and 32 deletions
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2
share/spack/gitlab/cloud_pipelines/.gitlab-ci.yml
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@ -445,7 +445,7 @@ e4s-rocm-external-build:
e4s-oneapi-generate:
extends: [ ".e4s-oneapi", ".generate-x86_64"]
image: ghcr.io/spack/ubuntu20.04-runner-amd64-oneapi-2023.2.1:2023.08.01
image: ecpe4s/ubuntu22.04-runner-amd64-oneapi-2024.0.0:2024.01.16b
e4s-oneapi-build:
extends: [ ".e4s-oneapi", ".build" ]

60
share/spack/gitlab/cloud_pipelines/stacks/e4s-oneapi/spack.yaml
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@ -68,21 +68,16 @@ spack:
require: "%gcc"
bison:
require: '%gcc'
# sycl abi change means you need 2024 compiler to use 2024 mkl
intel-oneapi-mkl:
require: "@2023"
specs:
# CPU
- adios
- aml
- amrex
- arborx
- argobots
- axom
- bolt
- boost
- bricks ~cuda
- butterflypack
- cabana
- caliper
@ -133,7 +128,6 @@ spack:
- papi
- papyrus
- parsec ~cuda
- pdt
- petsc
- phist
- plasma
@ -147,7 +141,6 @@ spack:
- py-petsc4py
- py-warpx
- qthreads scheduler=distrib
- quantum-espresso
- raja
- rempi
- scr
@ -160,7 +153,6 @@ spack:
- superlu-dist
- sz3
- tasmanian
- tau +mpi +python +syscall
- trilinos +amesos +amesos2 +anasazi +aztec +belos +boost +epetra +epetraext +ifpack +ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu +nox +piro +phalanx +rol +rythmos +sacado +stk +shards +shylu +stokhos +stratimikos +teko +tempus +tpetra +trilinoscouplings +zoltan +zoltan2 +superlu-dist gotype=long_long
- turbine
- umap
@ -186,43 +178,49 @@ spack:
- vtk-m ~openmp # https://github.com/spack/spack/issues/31830
- zfp
# --
# - alquimia # pflotran: https://github.com/spack/spack/issues/39474
# - archer # subsumed under llvm +libomp_tsan
# - dealii # dealii: https://github.com/spack/spack/issues/39482
# - dxt-explorer # r: https://github.com/spack/spack/issues/40257
# - alquimia # pflotran: https://github.com/spack/spack/issues/39474
# - dealii # dealii: https://github.com/spack/spack/issues/39482
# - dxt-explorer # r: https://github.com/spack/spack/issues/40257
# - ecp-data-vis-sdk ~cuda ~rocm +adios2 +ascent +cinema +darshan +faodel +hdf5 +paraview +pnetcdf +sz +unifyfs +veloc +visit +vtkm +zfp # embree: CMake Error at CMakeLists.txt:215 (MESSAGE): Unsupported compiler: IntelLLVM; qt: qtbase/src/corelib/global/qendian.h:333:54: error: incomplete type 'std::numeric_limits' used in nested name specifier
# - geopm # geopm issue: https://github.com/spack/spack/issues/38795
# - hpctoolkit # dyninst@12.3.0%gcc: /usr/bin/ld: libiberty/./d-demangle.c:142: undefined reference to `_intel_fast_memcpy'; can't mix intel-tbb@%oneapi with dyninst%gcc
# - mgard +serial +openmp +timing +unstructured ~cuda # mgard: mgard.tpp:63:48: error: non-constant-expression cannot be narrowed from type 'int' to 'unsigned long' in initializer list [-Wc++11-narrowing]
# - openfoam # cgal: https://github.com/spack/spack/issues/39481
# - openpmd-api # mgard: mgard.tpp:63:48: error: non-constant-expression cannot be narrowed from type 'int' to 'unsigned long' in initializer list [-Wc++11-narrowing]
# - swig@4.0.2-fortran # ?
# - upcxx # upcxx: /opt/intel/oneapi/mpi/2021.10.0//libfabric/bin/fi_info: error while loading shared libraries: libfabric.so.1: cannot open shared object file: No such file or directory
# - geopm # geopm issue: https://github.com/spack/spack/issues/38795
# - hpctoolkit # dyninst@12.3.0%gcc: /usr/bin/ld: libiberty/./d-demangle.c:142: undefined reference to `_intel_fast_memcpy'; can't mix intel-tbb@%oneapi with dyninst%gcc
# - mgard +serial +openmp +timing +unstructured ~cuda # mgard: mgard.tpp:63:48: error: non-constant-expression cannot be narrowed from type 'int' to 'unsigned long' in initializer list [-Wc++11-narrowing]
# - openfoam # cgal: https://github.com/spack/spack/issues/39481
# - openpmd-api # mgard: mgard.tpp:63:48: error: non-constant-expression cannot be narrowed from type 'int' to 'unsigned long' in initializer list [-Wc++11-narrowing]
# - swig@4.0.2-fortran # ?
# - upcxx # upcxx: /opt/intel/oneapi/mpi/2021.10.0//libfabric/bin/fi_info: error while loading shared libraries: libfabric.so.1: cannot open shared object file: No such file or directory
# --
# - bricks ~cuda # bricks: /opt/intel/oneapi/compiler/2024.0/bin/sycl-post-link: error while loading shared libraries: libonnxruntime.1.12.22.721.so: cannot open shared object file: No such file or directory
# - pdt # pdt: pdbType.cc:193:21: warning: ISO C++11 does not allow conversion from string literal to 'char *' [-Wwritable-strings]
# - quantum-espresso # quantum-espresso@7.2 /i3fqdx5: warning: <unknown>:0:0: loop not unroll-and-jammed: the optimizer was unable to perform the requested transformation; the transformation might be disabled or specified as part of an unsupported transformation ordering
# - tau +mpi +python +syscall # pdt: pdbType.cc:193:21: warning: ISO C++11 does not allow conversion from string literal to 'char *' [-Wwritable-strings]
# GPU
- aml +ze
- amrex +sycl
- arborx +sycl ^kokkos +sycl +openmp cxxstd=17 +examples
- cabana +sycl ^kokkos +sycl +openmp cxxstd=17 +examples
- ginkgo +sycl
- heffte +sycl
- kokkos +sycl +openmp cxxstd=17 +examples
- kokkos-kernels build_type=Release %oneapi ^kokkos +sycl +openmp cxxstd=17 +examples
- petsc +sycl
- slate +sycl
- sundials +sycl cxxstd=17 +examples-install
- tau +mpi +opencl +level_zero ~pdt +syscall # tau: requires libdrm.so to be installed
- tau +mpi +opencl +level_zero ~pdt +syscall # requires libdrm.so to be installed
- upcxx +level_zero
# --
# - hpctoolkit +level_zero # dyninst@12.3.0%gcc: /usr/bin/ld: libiberty/./d-demangle.c:142: undefined reference to `_intel_fast_memcpy'; can't mix intel-tbb@%oneapi with dyninst%gcc
# - warpx compute=sycl # warpx: spack-build-wzp6vvo/_deps/fetchedamrex-src/Src/Base/AMReX_RandomEngine.H:18:10: fatal error: 'oneapi/mkl/rng/device.hpp' file not found
# --
- aml # aml: /opt/intel/oneapi/compiler/2024.0/bin/sycl-post-link: error while loading shared libraries: libonnxruntime.1.12.22.721.so: cannot open shared object file: No such file or directory
- aml +ze # aml: /opt/intel/oneapi/compiler/2024.0/bin/sycl-post-link: error while loading shared libraries: libonnxruntime.1.12.22.721.so: cannot open shared object file: No such file or directory
- arborx +sycl ^kokkos +sycl +openmp cxxstd=17 +examples # kokkos@4.2.00: CMake Error at cmake/Modules/FindTPLONEDPL.cmake:31 (FIND_PACKAGE):
- cabana +sycl ^kokkos +sycl +openmp cxxstd=17 +examples # kokkos@4.2.00: CMake Error at cmake/Modules/FindTPLONEDPL.cmake:31 (FIND_PACKAGE):
- ginkgo +sycl # ginkgo: Could NOT find PAPI (missing: PAPI_LIBRARY PAPI_INCLUDE_DIR sde) (Required is at least version "7.0.1.0") SYCL feature test compile failed! compile output is: CMake Error at /opt/intel/oneapi/compiler/2024.0/lib/cmake/IntelSYCL/IntelSYCLConfig.cmake:282 (SYCL_FEATURE_TEST_EXTRACT): SYCL_FEATURE_TEST_EXTRACT Function invoked with incorrect arguments for
- heffte +sycl # heffte: /opt/intel/oneapi/compiler/2024.0/bin/sycl-post-link: error while loading shared libraries: libonnxruntime.1.12.22.721.so: cannot open shared object file: No such file or directory
- kokkos +sycl +openmp cxxstd=17 +examples # kokkos@4.2.00: CMake Error at cmake/Modules/FindTPLONEDPL.cmake:31 (FIND_PACKAGE):
- kokkos-kernels build_type=Release %oneapi ^kokkos +sycl +openmp cxxstd=17 +examples # kokkos@4.0.00: tpls/desul/include/desul/atomics/Adapt_SYCL.hpp:83:7: error: no template named 'sycl_memory_scope'
- petsc +sycl # kokkos@4.0.00: tpls/desul/include/desul/atomics/Adapt_SYCL.hpp:83:7: error: no template named 'sycl_memory_scope'
# - slate +sycl # blaspp: CMake Error at CMakeLists.txt:313 (find_package): ... set MKL_FOUND to FALSE so package "MKL" is considered to be NOT FOUND.
- sundials +sycl cxxstd=17 +examples-install # sundials@6.6.2 /cakfnxs: CMake: could NOT find MPI_CXX (missing: MPI_CXX_WORKS) (Required is at least version "2.0.0")
- py-scipy
ci:
pipeline-gen:
- build-job:
image: ghcr.io/spack/ubuntu20.04-runner-amd64-oneapi-2023.2.1:2023.08.01
image: ecpe4s/ubuntu22.04-runner-amd64-oneapi-2024.0.0:2024.01.16b
cdash:
build-group: E4S OneAPI