From 5a3a014aae985bb85a2ae472e882433a1a716280 Mon Sep 17 00:00:00 2001 From: Glenn Johnson Date: Tue, 20 Apr 2021 04:35:30 -0500 Subject: [PATCH] r-illumina450probevariants-db: new package (#23099) --- .../r-illumina450probevariants-db/package.py | 20 +++++++++++++++++++ 1 file changed, 20 insertions(+) create mode 100644 var/spack/repos/builtin/packages/r-illumina450probevariants-db/package.py diff --git a/var/spack/repos/builtin/packages/r-illumina450probevariants-db/package.py b/var/spack/repos/builtin/packages/r-illumina450probevariants-db/package.py new file mode 100644 index 00000000000..2df7d0a602a --- /dev/null +++ b/var/spack/repos/builtin/packages/r-illumina450probevariants-db/package.py @@ -0,0 +1,20 @@ +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RIllumina450probevariantsDb(RPackage): + """Annotation Package combining variant data from 1000 Genomes Project for + Illumina HumanMethylation450 Bead Chip probes: + + Includes details on variants for each probe on the 450k bead chip for each + of the four populations (Asian, American, African and European).""" + + bioc = "Illumina450ProbeVariants.db" + + version('1.26.0', commit='fffe6033cc8d87354078c14de1e29976eaedd611') + + depends_on('r@3.0.1:', type=('build', 'run'))