MFEM: add new version v4.7 (#44010)
* Core change: logic for extracting RPATHs from modules may return `None`: filter this out of the set of RPATHs that is auto-generated * Core change: `CachedCMakePackage` no longer adds ldflags to `CMAKE_STATIC_LINKER_FLAGS`: generally these flags are not appropriate for static linking (e.g. invocation of `ar`) * [mfem] Add version 4.7 * [mfem] Add variant for precision (single/double). Enforce consistency for precision amongst mfem and hypre/petsc/mumps dependencies * [mfem] Add cxxstd (and related constraints preventing use of old cxxstd values for newer versions of some dependencies) * [hypre] In line with prior point, added support for specifying precision * [petsc] Add config option to avoid error when building against `superlu-dist+rocm` * [hiop] add proper `raja`/`umpire`/`camp` version constraints for `hiop` versions 0.3.99-0.4.x; require `+raja` for `+rocm`, and add dependency on `hiprand` for `+rocm` * [butterflypack, mfem, strumpack, suite-sparse] Require `CRAYLIBS_{target-family}` env var to be defined * [suite-sparse] versions `@7.4:` changed install location of headers: add symlink from old location to new location * [zlib-ng] Fix error where shared libs were not successfully built for `%cce@17` (the build did not fail, but the finished `zlib-ng%cce@17` install did not have shared libs)
This commit is contained in:
@@ -740,7 +740,9 @@ def get_rpaths(pkg):
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# Second module is our compiler mod name. We use that to get rpaths from
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# module show output.
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if pkg.compiler.modules and len(pkg.compiler.modules) > 1:
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rpaths.append(path_from_modules([pkg.compiler.modules[1]]))
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mod_rpath = path_from_modules([pkg.compiler.modules[1]])
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if mod_rpath:
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rpaths.append(mod_rpath)
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return list(dedupe(filter_system_paths(rpaths)))
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@@ -162,7 +162,9 @@ def initconfig_compiler_entries(self):
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ld_flags = " ".join(flags["ldflags"])
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ld_format_string = "CMAKE_{0}_LINKER_FLAGS"
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# CMake has separate linker arguments for types of builds.
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for ld_type in ["EXE", "MODULE", "SHARED", "STATIC"]:
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# 'ldflags' should not be used with CMAKE_STATIC_LINKER_FLAGS which
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# is used by the archiver, so don't include "STATIC" in this loop:
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for ld_type in ["EXE", "MODULE", "SHARED"]:
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ld_string = ld_format_string.format(ld_type)
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entries.append(cmake_cache_string(ld_string, ld_flags))
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@@ -3,8 +3,6 @@
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from platform import machine
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from spack.package import *
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@@ -79,7 +77,13 @@ def cmake_args(self):
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args.append("-Denable_openmp=%s" % ("ON" if "+openmp" in spec else "OFF"))
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if "%cce" in spec:
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# Assume the proper Cray CCE module (cce) is loaded:
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craylibs_path = env["CRAYLIBS_" + machine().upper()]
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craylibs_var = "CRAYLIBS_" + str(spec.target.family).upper()
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craylibs_path = env.get(craylibs_var, None)
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if not craylibs_path:
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raise InstallError(
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f"The environment variable {craylibs_var} is not defined.\n"
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"\tMake sure the 'cce' module is in the compiler spec."
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)
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env.setdefault("LDFLAGS", "")
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env["LDFLAGS"] += " -Wl,-rpath," + craylibs_path
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@@ -75,7 +75,7 @@ class Hiop(CMakePackage, CudaPackage, ROCmPackage):
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variant("jsrun", default=False, description="Enable/Disable jsrun command for testing")
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variant("shared", default=False, description="Enable/Disable shared libraries")
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variant("mpi", default=True, description="Enable/Disable MPI")
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variant("raja", default=False, description="Enable/Disable RAJA")
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variant("raja", default=False, when="@0.3.99:", description="Enable/Disable RAJA")
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variant("kron", default=False, description="Enable/Disable Kron reduction")
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variant("sparse", default=False, description="Enable/Disable Sparse linear algebra")
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variant(
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@@ -124,7 +124,11 @@ class Hiop(CMakePackage, CudaPackage, ROCmPackage):
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# 1.0.2 fixes bug with cuda 12 compatibility
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# hiop@0.6.0 requires cusolver API in cuda@11
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depends_on("cuda@11:11.9", when="@0.6.0:1.0.1+cuda")
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depends_on("cuda@11:", when="@develop:+cuda")
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# Version v0.7.0 of HiOp is the earliest version that uses
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# cusparseSpGEMMreuse_workEstimation
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# which appears for the first time in the cuSPARSE version shipped with
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# CUDA 11.3.1, at least according to the CUDA online documentation.
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depends_on("cuda@11.3.1:", when="@0.7:+cuda")
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# Before hiop@0.6.0 only cuda requirement was magma
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depends_on("cuda", when="@:0.5.4+cuda")
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@@ -134,9 +138,11 @@ class Hiop(CMakePackage, CudaPackage, ROCmPackage):
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# RAJA > 0.14 and Umpire > 6.0 require c++ std 14
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# We are working on supporting newer Umpire/RAJA versions
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depends_on("raja@0.14.0:0.14", when="@0.5.0:+raja")
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depends_on("umpire@6.0.0:6", when="@0.5.0:+raja")
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depends_on("camp@0.2.3:0.2", when="@0.5.0:+raja")
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depends_on("raja@0.14", when="@0.5:+raja")
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depends_on("raja@:0.13", when="@0.3.99:0.4+raja")
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depends_on("umpire@6", when="@0.5:+raja")
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depends_on("umpire@:5", when="@0.3.99:0.4+raja")
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depends_on("camp@0.2.3:0.2", when="@0.3.99:+raja")
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# This is no longer a requirement in RAJA > 0.14
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depends_on("umpire+cuda~shared", when="+raja+cuda ^raja@:0.14")
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@@ -149,8 +155,10 @@ class Hiop(CMakePackage, CudaPackage, ROCmPackage):
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# We rely on RAJA / Umpire utilities when supporting CUDA backend
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conflicts("~raja", when="+cuda", msg="RAJA is required for CUDA support")
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conflicts("~raja", when="+rocm", msg="RAJA is required for ROCm support")
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depends_on("hip", when="+rocm")
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depends_on("hiprand", when="+rocm")
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depends_on("hipblas", when="+rocm")
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depends_on("hipsparse", when="+rocm")
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@@ -0,0 +1,27 @@
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diff --git a/src/distributed_ls/ParaSails/ConjGrad.c b/src/distributed_ls/ParaSails/ConjGrad.c
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index 0ef71b36f..7abbc38aa 100644
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--- a/src/distributed_ls/ParaSails/ConjGrad.c
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+++ b/src/distributed_ls/ParaSails/ConjGrad.c
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@@ -33,19 +33,19 @@ static HYPRE_Real InnerProd(HYPRE_Int n, HYPRE_Real *x, HYPRE_Real *y, MPI_Comm
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static void CopyVector(HYPRE_Int n, HYPRE_Real *x, HYPRE_Real *y)
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{
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HYPRE_Int one = 1;
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- hypre_F90_NAME_BLAS(dcopy, DCOPY)(&n, x, &one, y, &one);
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+ hypre_dcopy(&n, x, &one, y, &one);
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}
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static void ScaleVector(HYPRE_Int n, HYPRE_Real alpha, HYPRE_Real *x)
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{
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HYPRE_Int one = 1;
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- hypre_F90_NAME_BLAS(dscal, DSCAL)(&n, &alpha, x, &one);
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+ hypre_dscal(&n, &alpha, x, &one);
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}
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static void Axpy(HYPRE_Int n, HYPRE_Real alpha, HYPRE_Real *x, HYPRE_Real *y)
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{
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HYPRE_Int one = 1;
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- hypre_F90_NAME_BLAS(daxpy, DAXPY)(&n, &alpha, x, &one, y, &one);
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+ hypre_daxpy(&n, &alpha, x, &one, y, &one);
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}
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@@ -85,6 +85,14 @@ class Hypre(AutotoolsPackage, CudaPackage, ROCmPackage):
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variant("caliper", default=False, description="Enable Caliper support")
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variant("rocblas", default=False, description="Enable rocBLAS")
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variant("cublas", default=False, description="Enable cuBLAS")
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variant(
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"precision",
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default="double",
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values=("single", "double", "longdouble"),
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multi=False,
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description="Floating point precision",
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when="@2.12.1:",
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)
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# Patch to add gptune hookup codes
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patch("ij_gptune.patch", when="+gptune@2.19.0")
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@@ -100,6 +108,10 @@ class Hypre(AutotoolsPackage, CudaPackage, ROCmPackage):
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patch("hypre21800-compat.patch", when="@2.18.0")
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# Patch to get config flags right
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patch("detect-compiler.patch", when="@2.15.0:2.20.0")
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# The following patch may not work for all versions, so apply it only when
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# it is needed:
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patch("hypre-precision-fix.patch", when="precision=single")
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patch("hypre-precision-fix.patch", when="precision=longdouble")
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@when("@2.26.0")
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def patch(self): # fix sequential compilation in 'src/seq_mv'
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@@ -220,6 +232,11 @@ def configure_args(self):
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configure_args.extend(self.enable_or_disable("complex"))
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if spec.satisfies("precision=single"):
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configure_args.append("--enable-single")
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elif spec.satisfies("precision=longdouble"):
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configure_args.append("--enable-longdouble")
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if spec.satisfies("+shared"):
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configure_args.append("--enable-shared")
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|
@@ -98,12 +98,32 @@ def setup_build_environment(self, env):
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class MakefileBuilder(spack.build_systems.makefile.MakefileBuilder, SetupEnvironment):
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@property
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def build_targets(self):
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def compile_options(self):
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options = []
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if "+shared" in self.spec:
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options.append("COPTIONS={0}".format(self.pkg.compiler.cc_pic_flag))
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options.append(self.pkg.compiler.cc_pic_flag)
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if self.spec.satisfies("%cce@17:"):
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options.append("-std=c89")
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return options
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@property
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def optimize_options(self):
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options = []
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if "+debug" in self.spec:
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options.append("OPTFLAGS=-g -O0")
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options.extend(["-g", "-O0"])
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else:
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options.append("-O2") # default in Makefile.in
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return options
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@property
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def build_targets(self):
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options = []
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copts = self.compile_options
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oopts = self.optimize_options
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if copts:
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options.append("COPTIONS={0}".format(" ".join(copts)))
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if oopts:
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options.append("OPTFLAGS={0}".format(" ".join(oopts)))
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return options
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def install(self, pkg, spec, prefix):
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@@ -156,6 +176,8 @@ def install(self, pkg, spec, prefix):
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# Set up and run tests on installation
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ccompile(
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*self.compile_options,
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*self.optimize_options,
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"-I%s" % prefix.include,
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"-L%s" % prefix.lib,
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(pkg.compiler.cc_rpath_arg + prefix.lib if "+shared" in spec else ""),
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|
102
var/spack/repos/builtin/packages/mfem/mfem-4.7.patch
Normal file
102
var/spack/repos/builtin/packages/mfem/mfem-4.7.patch
Normal file
@@ -0,0 +1,102 @@
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diff --git a/examples/hiop/ex9p.cpp b/examples/hiop/ex9p.cpp
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index 4facbb3c0b..f783b97a3b 100644
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--- a/examples/hiop/ex9p.cpp
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+++ b/examples/hiop/ex9p.cpp
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@@ -96,6 +96,7 @@ public:
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{
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Vector w_glob(width);
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pfes.Dof_TrueDof_Matrix()->MultTranspose(w, w_glob);
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+ w_glob.HostReadWrite(); // read+write -> can use w_glob(i) (non-const)
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for (int i = 0; i < width; i++) { grad(0, i) = w_glob(i); }
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}
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diff --git a/linalg/sparsemat.cpp b/linalg/sparsemat.cpp
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index 0b5334d2a6..efe471d416 100644
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--- a/linalg/sparsemat.cpp
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+++ b/linalg/sparsemat.cpp
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@@ -1267,24 +1267,32 @@ real_t SparseMatrix::InnerProduct(const Vector &x, const Vector &y) const
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void SparseMatrix::GetRowSums(Vector &x) const
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{
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- for (int i = 0; i < height; i++)
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+ if (Finalized())
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{
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- real_t a = 0.0;
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- if (A)
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+ auto d_I = ReadI();
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+ auto d_A = ReadData();
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+ auto d_x = x.Write();
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+ mfem::forall(height, [=] MFEM_HOST_DEVICE (int i)
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{
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- for (int j = I[i], end = I[i+1]; j < end; j++)
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+ real_t sum = 0.0;
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+ for (int j = d_I[i], end = d_I[i+1]; j < end; j++)
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{
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- a += A[j];
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+ sum += d_A[j];
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}
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- }
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- else
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+ d_x[i] = sum;
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+ });
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+ }
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+ else
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+ {
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+ for (int i = 0; i < height; i++)
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{
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+ real_t a = 0.0;
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for (RowNode *np = Rows[i]; np != NULL; np = np->Prev)
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{
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a += np->Value;
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}
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+ x(i) = a;
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}
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- x(i) = a;
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}
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}
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diff --git a/linalg/sparsemat.hpp b/linalg/sparsemat.hpp
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index 7042279663..dc2d773bc4 100644
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--- a/linalg/sparsemat.hpp
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+++ b/linalg/sparsemat.hpp
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@@ -216,7 +216,7 @@ public:
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void ClearCuSparse() { ClearGPUSparse(); }
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|
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/// Check if the SparseMatrix is empty.
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- bool Empty() const { return (A == NULL) && (Rows == NULL); }
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+ bool Empty() const { return A.Empty() && (Rows == NULL); }
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|
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/// Return the array #I.
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inline int *GetI() { return I; }
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diff --git a/tests/unit/general/test_umpire_mem.cpp b/tests/unit/general/test_umpire_mem.cpp
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index 84457669ec..d4a7b85093 100644
|
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--- a/tests/unit/general/test_umpire_mem.cpp
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+++ b/tests/unit/general/test_umpire_mem.cpp
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@@ -18,12 +18,13 @@
|
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#include <unistd.h>
|
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#include <stdio.h>
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#include "umpire/Umpire.hpp"
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+#include <umpire/strategy/QuickPool.hpp>
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#ifdef MFEM_USE_CUDA
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#include <cuda.h>
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constexpr const char * device_name = "cuda";
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#elif defined(MFEM_USE_HIP)
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-constexpr const char * device_name = "raja-hip";
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+constexpr const char * device_name = "hip";
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#endif
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using namespace mfem;
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@@ -45,10 +46,12 @@ static bool is_pinned_host(void * h_p)
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unsigned flags;
|
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#ifdef MFEM_USE_CUDA
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auto err = cudaHostGetFlags(&flags, h_p);
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+ cudaGetLastError(); // also resets last error
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if (err == cudaSuccess) { return true; }
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else if (err == cudaErrorInvalidValue) { return false; }
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#elif defined(MFEM_USE_HIP)
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auto err = hipHostGetFlags(&flags, h_p);
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+ hipGetLastError(); // also resets last error
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if (err == hipSuccess) { return true; }
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else if (err == hipErrorInvalidValue) { return false; }
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#endif
|
@@ -1,24 +0,0 @@
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From 93ab69cac72cc2d13cfd4b7efcc235bdbca2b9f5 Mon Sep 17 00:00:00 2001
|
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From: Afzal Patel <afzal.patel@amd.com>
|
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Date: Wed, 17 Jan 2024 11:44:18 -0800
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Subject: [PATCH] Add hip library path to ghv flags so libamdhip64 can be found
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---
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config/makefile | 2 +-
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1 file changed, 1 insertion(+), 1 deletion(-)
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diff --git a/config/makefile b/config/makefile
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index 627d117..a453865 100644
|
||||
--- a/config/makefile
|
||||
+++ b/config/makefile
|
||||
@@ -38,7 +38,7 @@ all: header config-mk
|
||||
MPI = $(MFEM_USE_MPI:NO=)
|
||||
GHV_CXX ?= $(MFEM_CXX)
|
||||
GHV = get_hypre_version
|
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-GHV_FLAGS = $(subst @MFEM_DIR@,$(if $(MFEM_DIR),$(MFEM_DIR),..),$(HYPRE_OPT))
|
||||
+GHV_FLAGS = $(subst @MFEM_DIR@,$(if $(MFEM_DIR),$(MFEM_DIR),..),$(HYPRE_OPT)) $(HIP_LIB)
|
||||
SMX = $(if $(MFEM_USE_PUMI:NO=),MFEM_USE_SIMMETRIX)
|
||||
SMX_PATH = $(PUMI_DIR)/include/gmi_sim.h
|
||||
SMX_FILE = $(subst @MFEM_DIR@,$(if $(MFEM_DIR),$(MFEM_DIR),..),$(SMX_PATH))
|
||||
--
|
||||
2.25.1
|
@@ -6,7 +6,6 @@
|
||||
import os
|
||||
import shutil
|
||||
import sys
|
||||
from platform import machine
|
||||
|
||||
from spack.package import *
|
||||
|
||||
@@ -51,6 +50,13 @@ class Mfem(Package, CudaPackage, ROCmPackage):
|
||||
# other version.
|
||||
version("develop", branch="master")
|
||||
|
||||
version(
|
||||
"4.7.0",
|
||||
sha256="5e889493f5f79848f7b2d16afaae307c59880ac2a7ff2315551c60ca54717751",
|
||||
url="https://bit.ly/mfem-4-7",
|
||||
extension="tar.gz",
|
||||
)
|
||||
|
||||
version(
|
||||
"4.6.0",
|
||||
sha256="5fa9465b5bec56bfb777a4d2826fba48d85fbace4aed8b64a2fd4059bf075b15",
|
||||
@@ -212,6 +218,21 @@ class Mfem(Package, CudaPackage, ROCmPackage):
|
||||
variant("examples", default=False, description="Build and install examples")
|
||||
variant("miniapps", default=False, description="Build and install miniapps")
|
||||
variant("exceptions", default=False, description="Enable the use of exceptions")
|
||||
variant(
|
||||
"precision",
|
||||
default="double",
|
||||
values=("single", "double"),
|
||||
multi=False,
|
||||
description="Floating point precision",
|
||||
when="@4.7.0:",
|
||||
)
|
||||
variant(
|
||||
"cxxstd",
|
||||
default="auto",
|
||||
values=("auto", conditional("98", when="@:3"), "11", "14", "17"),
|
||||
multi=False,
|
||||
description="C++ language standard",
|
||||
)
|
||||
|
||||
conflicts("+shared", when="@:3.3.2")
|
||||
conflicts("~static~shared")
|
||||
@@ -290,6 +311,7 @@ class Mfem(Package, CudaPackage, ROCmPackage):
|
||||
depends_on("sundials@5.0.0:5+mpi+hypre", when="@4.0.1-xsdk:4.4+sundials+mpi")
|
||||
depends_on("sundials@5.0.0:6.7.0", when="@4.5.0:+sundials~mpi")
|
||||
depends_on("sundials@5.0.0:6.7.0+mpi+hypre", when="@4.5.0:+sundials+mpi")
|
||||
conflicts("cxxstd=11", when="^sundials@6.4.0:")
|
||||
for sm_ in CudaPackage.cuda_arch_values:
|
||||
depends_on(
|
||||
"sundials@5.4.0:+cuda cuda_arch={0}".format(sm_),
|
||||
@@ -337,7 +359,7 @@ class Mfem(Package, CudaPackage, ROCmPackage):
|
||||
# The PETSc tests in MFEM will fail if PETSc is not configured with
|
||||
# MUMPS (and SuiteSparse in older versions). On the other hand, PETSc built
|
||||
# with MUMPS is not strictly required, so we do not require it here.
|
||||
depends_on("petsc@3.8:+mpi+double+hypre", when="+petsc")
|
||||
depends_on("petsc@3.8:+mpi+hypre", when="+petsc")
|
||||
depends_on("slepc@3.8.0:", when="+slepc")
|
||||
# If petsc is built with +cuda, propagate cuda_arch to petsc and slepc
|
||||
for sm_ in CudaPackage.cuda_arch_values:
|
||||
@@ -361,6 +383,7 @@ class Mfem(Package, CudaPackage, ROCmPackage):
|
||||
depends_on("conduit+mpi", when="+conduit+mpi")
|
||||
depends_on("libfms@0.2.0:", when="+fms")
|
||||
depends_on("ginkgo@1.4.0:", when="+ginkgo")
|
||||
conflicts("cxxstd=11", when="^ginkgo")
|
||||
for sm_ in CudaPackage.cuda_arch_values:
|
||||
depends_on(
|
||||
"ginkgo+cuda cuda_arch={0}".format(sm_), when="+ginkgo+cuda cuda_arch={0}".format(sm_)
|
||||
@@ -402,6 +425,7 @@ class Mfem(Package, CudaPackage, ROCmPackage):
|
||||
depends_on("raja@0.13.0", when="@4.3.0+raja")
|
||||
depends_on("raja@0.14.0:2022.03", when="@4.4.0:4.5.0+raja")
|
||||
depends_on("raja@2022.10.3:", when="@4.5.2:+raja")
|
||||
conflicts("cxxstd=11", when="^raja@2022.03.0:")
|
||||
for sm_ in CudaPackage.cuda_arch_values:
|
||||
depends_on(
|
||||
"raja+cuda cuda_arch={0}".format(sm_), when="+raja+cuda cuda_arch={0}".format(sm_)
|
||||
@@ -429,6 +453,7 @@ class Mfem(Package, CudaPackage, ROCmPackage):
|
||||
|
||||
depends_on("umpire@2.0.0:2.1.0", when="@:4.3.0+umpire")
|
||||
depends_on("umpire@3.0.0:", when="@4.4.0:+umpire")
|
||||
conflicts("cxxstd=11", when="^umpire@2022.03.0:")
|
||||
for sm_ in CudaPackage.cuda_arch_values:
|
||||
depends_on(
|
||||
"umpire+cuda cuda_arch={0}".format(sm_), when="+umpire+cuda cuda_arch={0}".format(sm_)
|
||||
@@ -448,6 +473,20 @@ class Mfem(Package, CudaPackage, ROCmPackage):
|
||||
"amgx~mpi cuda_arch={0}".format(sm_), when="+amgx~mpi cuda_arch={0}".format(sm_)
|
||||
)
|
||||
|
||||
for using_double_cond in ["@:4.6", "precision=double"]:
|
||||
with when(using_double_cond):
|
||||
# May need to enforce precision consistency on other packages in the
|
||||
# future.
|
||||
depends_on("hypre precision=double", when="+mpi")
|
||||
depends_on("petsc+double", when="+petsc")
|
||||
depends_on("mumps+double", when="+mumps")
|
||||
with when("precision=single"):
|
||||
# May need to enforce precision consistency on other packages in the
|
||||
# future.
|
||||
depends_on("hypre precision=single", when="+mpi")
|
||||
depends_on("petsc~double", when="+petsc")
|
||||
depends_on("mumps+float", when="+mumps")
|
||||
|
||||
patch("mfem_ppc_build.patch", when="@3.2:3.3.0 arch=ppc64le")
|
||||
patch("mfem-3.4.patch", when="@3.4.0")
|
||||
patch("mfem-3.3-3.4-petsc-3.9.patch", when="@3.3.0:3.4.0 +petsc ^petsc@3.9.0:")
|
||||
@@ -468,7 +507,7 @@ class Mfem(Package, CudaPackage, ROCmPackage):
|
||||
when="@4.6.0 +gslib+shared+miniapps",
|
||||
sha256="2a31682d876626529e2778a216d403648b83b90997873659a505d982d0e65beb",
|
||||
)
|
||||
patch("mfem-hip.patch", when="+rocm ^hip@6.0:")
|
||||
patch("mfem-4.7.patch", when="@4.7.0")
|
||||
|
||||
phases = ["configure", "build", "install"]
|
||||
|
||||
@@ -489,56 +528,16 @@ def setup_build_environment(self, env):
|
||||
# likely to be up to date in supporting *all* of MFEM's
|
||||
# configuration options. So, don't use CMake
|
||||
#
|
||||
def configure(self, spec, prefix):
|
||||
def get_make_config_options(self, spec, prefix):
|
||||
def yes_no(varstr):
|
||||
return "YES" if varstr in self.spec else "NO"
|
||||
|
||||
# See also find_system_libraries in lib/spack/llnl/util/filesystem.py
|
||||
# where the same list of paths is used.
|
||||
sys_lib_paths = [
|
||||
"/lib64",
|
||||
"/lib",
|
||||
"/usr/lib64",
|
||||
"/usr/lib",
|
||||
"/usr/local/lib64",
|
||||
"/usr/local/lib",
|
||||
"/usr/lib/x86_64-linux-gnu",
|
||||
]
|
||||
|
||||
def is_sys_lib_path(dir):
|
||||
return dir in sys_lib_paths
|
||||
|
||||
xcompiler = ""
|
||||
xlinker = "-Wl,"
|
||||
if "+cuda" in spec:
|
||||
xcompiler = "-Xcompiler="
|
||||
xlinker = "-Xlinker="
|
||||
cuda_arch = None if "~cuda" in spec else spec.variants["cuda_arch"].value
|
||||
xcompiler = "" if "~cuda" in spec else "-Xcompiler="
|
||||
|
||||
# We need to add rpaths explicitly to allow proper export of link flags
|
||||
# from within MFEM.
|
||||
|
||||
# Similar to spec[pkg].libs.ld_flags but prepends rpath flags too.
|
||||
# Also does not add system library paths as defined by 'sys_lib_paths'
|
||||
# above -- this is done to avoid issues like this:
|
||||
# https://github.com/mfem/mfem/issues/1088.
|
||||
def ld_flags_from_library_list(libs_list):
|
||||
flags = [
|
||||
"%s-rpath,%s" % (xlinker, dir)
|
||||
for dir in libs_list.directories
|
||||
if not is_sys_lib_path(dir)
|
||||
]
|
||||
flags += ["-L%s" % dir for dir in libs_list.directories if not is_sys_lib_path(dir)]
|
||||
flags += [libs_list.link_flags]
|
||||
return " ".join(flags)
|
||||
|
||||
def ld_flags_from_dirs(pkg_dirs_list, pkg_libs_list):
|
||||
flags = [
|
||||
"%s-rpath,%s" % (xlinker, dir) for dir in pkg_dirs_list if not is_sys_lib_path(dir)
|
||||
]
|
||||
flags += ["-L%s" % dir for dir in pkg_dirs_list if not is_sys_lib_path(dir)]
|
||||
flags += ["-l%s" % lib for lib in pkg_libs_list]
|
||||
return " ".join(flags)
|
||||
# from within MFEM. We use the following two functions to do that.
|
||||
ld_flags_from_library_list = self.ld_flags_from_library_list
|
||||
ld_flags_from_dirs = self.ld_flags_from_dirs
|
||||
|
||||
def find_optional_library(name, prefix):
|
||||
for shared in [True, False]:
|
||||
@@ -619,6 +618,8 @@ def find_optional_library(name, prefix):
|
||||
"MFEM_USE_EXCEPTIONS=%s" % yes_no("+exceptions"),
|
||||
"MFEM_USE_MUMPS=%s" % yes_no("+mumps"),
|
||||
]
|
||||
if spec.satisfies("@4.7.0:"):
|
||||
options += ["MFEM_PRECISION=%s" % spec.variants["precision"].value]
|
||||
|
||||
# Determine C++ standard to use:
|
||||
cxxstd = None
|
||||
@@ -632,6 +633,11 @@ def find_optional_library(name, prefix):
|
||||
cxxstd = "14"
|
||||
if self.spec.satisfies("^ginkgo"):
|
||||
cxxstd = "14"
|
||||
cxxstd_req = spec.variants["cxxstd"].value
|
||||
if cxxstd_req != "auto":
|
||||
# Constraints for valid standard level should be imposed during
|
||||
# concretization based on 'conflicts' or other directives.
|
||||
cxxstd = cxxstd_req
|
||||
cxxstd_flag = None
|
||||
if cxxstd:
|
||||
if "+cuda" in spec:
|
||||
@@ -639,6 +645,8 @@ def find_optional_library(name, prefix):
|
||||
else:
|
||||
cxxstd_flag = getattr(self.compiler, "cxx" + cxxstd + "_flag")
|
||||
|
||||
cuda_arch = None if "~cuda" in spec else spec.variants["cuda_arch"].value
|
||||
|
||||
cxxflags = spec.compiler_flags["cxxflags"].copy()
|
||||
|
||||
if cxxflags:
|
||||
@@ -944,7 +952,6 @@ def find_optional_library(name, prefix):
|
||||
options += ["HIP_CXX=%s" % spec["hip"].hipcc, "HIP_ARCH=%s" % amdgpu_target]
|
||||
hip_headers = HeaderList([])
|
||||
hip_libs = LibraryList([])
|
||||
hip_libs += find_libraries("libamdhip64", spec["hip"].prefix.lib)
|
||||
# To use a C++ compiler that supports -xhip flag one can use
|
||||
# something like this:
|
||||
# options += [
|
||||
@@ -972,9 +979,27 @@ def find_optional_library(name, prefix):
|
||||
hip_headers += spec["hipblas"].headers
|
||||
if "%cce" in spec:
|
||||
# We assume the proper Cray CCE module (cce) is loaded:
|
||||
craylibs_path = env["CRAYLIBS_" + machine().upper()]
|
||||
craylibs = ["libmodules", "libfi", "libcraymath", "libf", "libu", "libcsup"]
|
||||
proc = str(spec.target.family)
|
||||
craylibs_var = "CRAYLIBS_" + proc.upper()
|
||||
craylibs_path = env.get(craylibs_var, None)
|
||||
if not craylibs_path:
|
||||
raise InstallError(
|
||||
f"The environment variable {craylibs_var} is not defined.\n"
|
||||
"\tMake sure the 'cce' module is in the compiler spec."
|
||||
)
|
||||
craylibs = [
|
||||
"libmodules",
|
||||
"libfi",
|
||||
"libcraymath",
|
||||
"libf",
|
||||
"libu",
|
||||
"libcsup",
|
||||
"libpgas-shmem",
|
||||
]
|
||||
hip_libs += find_libraries(craylibs, craylibs_path)
|
||||
craylibs_path2 = join_path(craylibs_path, "../../../cce-clang", proc, "lib")
|
||||
hip_libs += find_libraries("libunwind", craylibs_path2)
|
||||
|
||||
if hip_headers:
|
||||
options += ["HIP_OPT=%s" % hip_headers.cpp_flags]
|
||||
if hip_libs:
|
||||
@@ -1018,9 +1043,17 @@ def find_optional_library(name, prefix):
|
||||
]
|
||||
|
||||
if "+umpire" in spec:
|
||||
umpire = spec["umpire"]
|
||||
umpire_opts = umpire.headers
|
||||
umpire_libs = umpire.libs
|
||||
if "^camp" in umpire:
|
||||
umpire_opts += umpire["camp"].headers
|
||||
if "^fmt" in umpire:
|
||||
umpire_opts += umpire["fmt"].headers
|
||||
umpire_libs += umpire["fmt"].libs
|
||||
options += [
|
||||
"UMPIRE_OPT=-I%s" % spec["umpire"].prefix.include,
|
||||
"UMPIRE_LIB=%s" % ld_flags_from_library_list(spec["umpire"].libs),
|
||||
"UMPIRE_OPT=%s" % umpire_opts.cpp_flags,
|
||||
"UMPIRE_LIB=%s" % ld_flags_from_library_list(umpire_libs),
|
||||
]
|
||||
|
||||
timer_ids = {"std": "0", "posix": "2", "mac": "4", "mpi": "6"}
|
||||
@@ -1089,7 +1122,7 @@ def find_optional_library(name, prefix):
|
||||
hiop_libs = hiop.libs
|
||||
hiop_hdrs += spec["lapack"].headers + spec["blas"].headers
|
||||
hiop_libs += spec["lapack"].libs + spec["blas"].libs
|
||||
hiop_opt_libs = ["magma", "umpire"]
|
||||
hiop_opt_libs = ["magma", "umpire", "hipblas", "hiprand"]
|
||||
for opt_lib in hiop_opt_libs:
|
||||
if "^" + opt_lib in hiop:
|
||||
hiop_hdrs += hiop[opt_lib].headers
|
||||
@@ -1105,6 +1138,8 @@ def find_optional_library(name, prefix):
|
||||
camp = raja["camp"]
|
||||
hiop_hdrs += camp.headers
|
||||
hiop_libs += find_optional_library("libcamp", camp.prefix)
|
||||
if hiop.satisfies("@0.6:+cuda"):
|
||||
hiop_libs += LibraryList(["cublas", "curand"])
|
||||
options += [
|
||||
"HIOP_OPT=%s" % hiop_hdrs.cpp_flags,
|
||||
"HIOP_LIB=%s" % ld_flags_from_library_list(hiop_libs),
|
||||
@@ -1121,6 +1156,10 @@ def find_optional_library(name, prefix):
|
||||
"MUMPS_LIB=%s" % ld_flags_from_library_list(mumps.libs),
|
||||
]
|
||||
|
||||
return options
|
||||
|
||||
def configure(self, spec, prefix):
|
||||
options = self.get_make_config_options(spec, prefix)
|
||||
make("config", *options, parallel=False)
|
||||
make("info", parallel=False)
|
||||
|
||||
@@ -1281,3 +1320,46 @@ def test_mk(self):
|
||||
if os.access(f, os.R_OK):
|
||||
return FileList(f)
|
||||
return FileList(find(self.prefix, "test.mk", recursive=True))
|
||||
|
||||
# See also find_system_libraries in lib/spack/llnl/util/filesystem.py
|
||||
# where the similar list of paths is used.
|
||||
sys_lib_paths = [
|
||||
"/lib64",
|
||||
"/lib",
|
||||
"/usr/lib64",
|
||||
"/usr/lib",
|
||||
"/usr/local/lib64",
|
||||
"/usr/local/lib",
|
||||
"/usr/lib/x86_64-linux-gnu",
|
||||
]
|
||||
|
||||
def is_sys_lib_path(self, dir):
|
||||
return dir in self.sys_lib_paths
|
||||
|
||||
@property
|
||||
def xlinker(self):
|
||||
return "-Wl," if "~cuda" in self.spec else "-Xlinker="
|
||||
|
||||
# Similar to spec[pkg].libs.ld_flags but prepends rpath flags too.
|
||||
# Also does not add system library paths as defined by 'sys_lib_paths'
|
||||
# above -- this is done to avoid issues like this:
|
||||
# https://github.com/mfem/mfem/issues/1088.
|
||||
def ld_flags_from_library_list(self, libs_list):
|
||||
flags = [
|
||||
"%s-rpath,%s" % (self.xlinker, dir)
|
||||
for dir in libs_list.directories
|
||||
if not self.is_sys_lib_path(dir)
|
||||
]
|
||||
flags += ["-L%s" % dir for dir in libs_list.directories if not self.is_sys_lib_path(dir)]
|
||||
flags += [libs_list.link_flags]
|
||||
return " ".join(flags)
|
||||
|
||||
def ld_flags_from_dirs(self, pkg_dirs_list, pkg_libs_list):
|
||||
flags = [
|
||||
"%s-rpath,%s" % (self.xlinker, dir)
|
||||
for dir in pkg_dirs_list
|
||||
if not self.is_sys_lib_path(dir)
|
||||
]
|
||||
flags += ["-L%s" % dir for dir in pkg_dirs_list if not self.is_sys_lib_path(dir)]
|
||||
flags += ["-l%s" % lib for lib in pkg_libs_list]
|
||||
return " ".join(flags)
|
||||
|
@@ -14,9 +14,9 @@ rocm_arch="gfx908"
|
||||
spack_jobs=''
|
||||
# spack_jobs='-j 128'
|
||||
|
||||
mfem='mfem@4.6.0'${compiler}
|
||||
mfem='mfem@4.7.0'${compiler}
|
||||
# mfem_dev='mfem@develop'${compiler}
|
||||
mfem_dev='mfem@4.6.0'${compiler}
|
||||
mfem_dev='mfem@4.7.0'${compiler}
|
||||
|
||||
backends='+occa+raja+libceed'
|
||||
backends_specs='^occa~cuda ^raja~openmp'
|
||||
@@ -31,44 +31,60 @@ petsc_spec_rocm='^petsc+rocm+mumps'
|
||||
strumpack_spec='^strumpack~slate~openmp~cuda'
|
||||
strumpack_cuda_spec='^strumpack+cuda~slate~openmp'
|
||||
strumpack_rocm_spec='^strumpack+rocm~slate~openmp~cuda'
|
||||
# superlu specs with cuda and rocm
|
||||
superlu_cuda_spec='^superlu-dist+cuda'
|
||||
superlu_rocm_spec='^superlu-dist+rocm'
|
||||
# superlu specs with cpu, cuda and rocm
|
||||
# - v8.2.1 on CPU and GPU stalls in ex11p; works when superlu::PARMETIS is
|
||||
# replaced with superlu::METIS_AT_PLUS_A, at least on CPU
|
||||
superlu_spec='^superlu-dist@8.1.2'
|
||||
superlu_cuda_spec='^superlu-dist@8.1.2+cuda'
|
||||
superlu_rocm_spec='^superlu-dist@8.1.2+rocm'
|
||||
# FMS spec
|
||||
fms_spec='^libfms+conduit'
|
||||
|
||||
builds=(
|
||||
# preferred version:
|
||||
${mfem}
|
||||
${mfem}'~mpi~metis~zlib'
|
||||
${mfem}"$backends"'+superlu-dist+strumpack+suite-sparse+petsc+slepc+gslib \
|
||||
+sundials+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo+hiop \
|
||||
'"$backends_specs $strumpack_spec $petsc_spec $conduit_spec"
|
||||
# TODO: add back "+fms $fms_spec" when the FMS unit test is fixed
|
||||
${mfem}"$backends"'+superlu-dist+strumpack+mumps+suite-sparse+petsc+slepc \
|
||||
+gslib+sundials+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo \
|
||||
+hiop \
|
||||
'"$backends_specs $superlu_spec $strumpack_spec $petsc_spec"' \
|
||||
'"$conduit_spec"
|
||||
# TODO: add back "+fms $fms_spec" when the FMS unit test is fixed
|
||||
${mfem}'~mpi \
|
||||
'"$backends"'+suite-sparse+sundials+gslib+mpfr+netcdf \
|
||||
+zlib+gnutls+libunwind+conduit+ginkgo+hiop \
|
||||
'"$backends_specs $conduit_spec"' ^sundials~mpi'
|
||||
${mfem}' precision=single +mumps+petsc '"$petsc_spec"
|
||||
|
||||
# develop version, shared builds:
|
||||
${mfem_dev}'+shared~static'
|
||||
${mfem_dev}'+shared~static~mpi~metis~zlib'
|
||||
# NOTE: Shared build with +gslib works on mac but not on linux
|
||||
# TODO: add back '+gslib' when the above NOTE is addressed.
|
||||
# TODO: add back "+fms $fms_spec" when the FMS unit test is fixed
|
||||
${mfem_dev}'+shared~static \
|
||||
'"$backends"'+superlu-dist+strumpack+suite-sparse+petsc+slepc \
|
||||
'"$backends"'+superlu-dist+strumpack+mumps+suite-sparse+petsc+slepc \
|
||||
+sundials+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo+hiop \
|
||||
'"$backends_specs $strumpack_spec $petsc_spec $conduit_spec"
|
||||
'"$backends_specs $superlu_spec $strumpack_spec $petsc_spec"' \
|
||||
'"$conduit_spec"
|
||||
# NOTE: Shared build with +gslib works on mac but not on linux
|
||||
# TODO: add back '+gslib' when the above NOTE is addressed.
|
||||
# TODO: add back "+fms $fms_spec" when the FMS unit test is fixed
|
||||
${mfem_dev}'+shared~static~mpi \
|
||||
'"$backends"'+suite-sparse+sundials+mpfr+netcdf \
|
||||
+zlib+gnutls+libunwind+conduit+ginkgo+hiop \
|
||||
'"$backends_specs $conduit_spec"' ^sundials~mpi'
|
||||
${mfem_dev}'+shared~static precision=single +mumps+petsc '"$petsc_spec"
|
||||
)
|
||||
|
||||
builds2=(
|
||||
# preferred version
|
||||
${mfem}"$backends $backends_specs"
|
||||
${mfem}'+superlu-dist'
|
||||
${mfem}' precision=single'
|
||||
${mfem}'+superlu-dist'" $superlu_spec"
|
||||
${mfem}'+strumpack'" $strumpack_spec"
|
||||
${mfem}'+mumps'
|
||||
${mfem}'+suite-sparse~mpi'
|
||||
${mfem}'+suite-sparse'
|
||||
${mfem}'+sundials~mpi ^sundials~mpi'
|
||||
@@ -81,6 +97,8 @@ builds2=(
|
||||
${mfem}'+gnutls'
|
||||
${mfem}'+conduit~mpi'" $conduit_spec"
|
||||
${mfem}'+conduit'" $conduit_spec"
|
||||
# TODO: uncomment next line when the FMS unit test is fixed
|
||||
# ${mfem}'+fms'" $fms_spec"
|
||||
${mfem}'+umpire'
|
||||
${mfem}'+petsc'" $petsc_spec"
|
||||
${mfem}'+petsc+slepc'" $petsc_spec"
|
||||
@@ -93,8 +111,10 @@ builds2=(
|
||||
#
|
||||
# develop version
|
||||
${mfem_dev}"$backends $backends_specs"
|
||||
${mfem_dev}'+superlu-dist'
|
||||
${mfem_dev}' precision=single'
|
||||
${mfem_dev}'+superlu-dist'" $superlu_spec"
|
||||
${mfem_dev}'+strumpack'" $strumpack_spec"
|
||||
${mfem_dev}'+mumps'
|
||||
${mfem_dev}'+suite-sparse~mpi'
|
||||
${mfem_dev}'+suite-sparse'
|
||||
${mfem_dev}'+sundials~mpi ^sundials~mpi'
|
||||
@@ -107,6 +127,8 @@ builds2=(
|
||||
${mfem_dev}'+gnutls'
|
||||
${mfem_dev}'+conduit~mpi'" $conduit_spec"
|
||||
${mfem_dev}'+conduit'" $conduit_spec"
|
||||
# TODO: uncomment next line when the FMS unit test is fixed
|
||||
# ${mfem_dev}'+fms'" $fms_spec"
|
||||
${mfem_dev}'+umpire'
|
||||
${mfem_dev}'+petsc'" $petsc_spec"
|
||||
${mfem_dev}'+petsc+slepc'" $petsc_spec"
|
||||
@@ -134,25 +156,37 @@ builds_cuda=(
|
||||
# hypre without cuda:
|
||||
# NOTE: PETSc tests may need PETSC_OPTIONS="-use_gpu_aware_mpi 0"
|
||||
# TODO: restore '+libceed' when the libCEED CUDA unit tests take less time.
|
||||
# TODO: remove "^hiop+shared" when the default static build is fixed.
|
||||
${mfem}'+cuda+openmp+raja+occa cuda_arch='"${cuda_arch}"' \
|
||||
+superlu-dist+strumpack+suite-sparse+gslib+petsc+slepc \
|
||||
+sundials+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo+hiop \
|
||||
^raja+cuda+openmp ^hiop+shared'" $strumpack_cuda_spec"' \
|
||||
+sundials+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo \
|
||||
^raja+cuda+openmp'" $strumpack_cuda_spec"' \
|
||||
'"$superlu_cuda_spec $petsc_spec_cuda $conduit_spec"
|
||||
|
||||
${mfem}'+cuda cuda_arch='"${cuda_arch}"' +raja+umpire'
|
||||
|
||||
# hiop needs older versions of raja, umpire, etc
|
||||
# TODO: combine this spec with the above spec when the combined spec works.
|
||||
${mfem}'+cuda cuda_arch='"${cuda_arch}"' +hiop'
|
||||
|
||||
# hypre with cuda:
|
||||
# TODO: restore '+libceed' when the libCEED CUDA unit tests take less time.
|
||||
# TODO: add back "+petsc+slepc $petsc_spec_cuda" when it works.
|
||||
# NOTE: PETSc tests may need PETSC_OPTIONS="-use_gpu_aware_mpi 0"
|
||||
# TODO: add back "+sundials" when it's supported with '^hypre+cuda'.
|
||||
# TODO: remove "^hiop+shared" when the default static build is fixed.
|
||||
${mfem}'+cuda+openmp+raja+occa cuda_arch='"${cuda_arch}"' \
|
||||
+superlu-dist+strumpack+suite-sparse+gslib \
|
||||
+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo+hiop \
|
||||
^raja+cuda+openmp ^hiop+shared ^hypre+cuda \
|
||||
+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo \
|
||||
^raja+cuda+openmp ^hypre+cuda \
|
||||
'" $strumpack_cuda_spec $superlu_cuda_spec $conduit_spec"
|
||||
|
||||
${mfem}'+cuda cuda_arch='"${cuda_arch}"' +raja+umpire ^hypre+cuda'
|
||||
|
||||
# hiop needs older versions of raja, umpire, etc
|
||||
# TODO: combine this spec with the above spec when the combined spec works.
|
||||
${mfem}'+cuda cuda_arch='"${cuda_arch}"' +hiop ^hypre+cuda'
|
||||
|
||||
${mfem}' precision=single +cuda cuda_arch='"${cuda_arch}"' ^hypre+cuda'
|
||||
|
||||
#
|
||||
# same builds as above with ${mfem_dev}
|
||||
#
|
||||
@@ -171,24 +205,36 @@ builds_cuda=(
|
||||
# hypre without cuda:
|
||||
# NOTE: PETSc tests may need PETSC_OPTIONS="-use_gpu_aware_mpi 0"
|
||||
# TODO: restore '+libceed' when the libCEED CUDA unit tests take less time.
|
||||
# TODO: remove "^hiop+shared" when the default static build is fixed.
|
||||
${mfem_dev}'+cuda+openmp+raja+occa cuda_arch='"${cuda_arch}"' \
|
||||
+superlu-dist+strumpack+suite-sparse+gslib+petsc+slepc \
|
||||
+sundials+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo+hiop \
|
||||
^raja+cuda+openmp ^hiop+shared'" $strumpack_cuda_spec"' \
|
||||
+sundials+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo \
|
||||
^raja+cuda+openmp'" $strumpack_cuda_spec"' \
|
||||
'"$superlu_cuda_spec $petsc_spec_cuda $conduit_spec"
|
||||
|
||||
${mfem_dev}'+cuda cuda_arch='"${cuda_arch}"' +raja+umpire'
|
||||
|
||||
# hiop needs older versions of raja, umpire, etc
|
||||
# TODO: combine this spec with the above spec when the combined spec works.
|
||||
${mfem_dev}'+cuda cuda_arch='"${cuda_arch}"' +hiop'
|
||||
|
||||
# hypre with cuda:
|
||||
# TODO: restore '+libceed' when the libCEED CUDA unit tests take less time.
|
||||
# TODO: add back "+petsc+slepc $petsc_spec_cuda" when it works.
|
||||
# NOTE: PETSc tests may need PETSC_OPTIONS="-use_gpu_aware_mpi 0"
|
||||
# TODO: add back "+sundials" when it's supported with '^hypre+cuda'.
|
||||
# TODO: remove "^hiop+shared" when the default static build is fixed.
|
||||
${mfem_dev}'+cuda+openmp+raja+occa cuda_arch='"${cuda_arch}"' \
|
||||
+superlu-dist+strumpack+suite-sparse+gslib \
|
||||
+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo+hiop \
|
||||
^raja+cuda+openmp ^hiop+shared ^hypre+cuda \
|
||||
+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo \
|
||||
^raja+cuda+openmp ^hypre+cuda \
|
||||
'"$strumpack_cuda_spec $superlu_cuda_spec $conduit_spec"
|
||||
|
||||
${mfem_dev}'+cuda cuda_arch='"${cuda_arch}"' +raja+umpire ^hypre+cuda'
|
||||
|
||||
# hiop needs older versions of raja, umpire, etc
|
||||
# TODO: combine this spec with the above spec when the combined spec works.
|
||||
${mfem_dev}'+cuda cuda_arch='"${cuda_arch}"' +hiop ^hypre+cuda'
|
||||
|
||||
${mfem_dev}' precision=single +cuda cuda_arch='"${cuda_arch}"' ^hypre+cuda'
|
||||
)
|
||||
|
||||
|
||||
@@ -204,27 +250,35 @@ builds_rocm=(
|
||||
^raja+rocm~openmp ^occa~cuda~openmp ^hypre+rocm'
|
||||
|
||||
# hypre without rocm:
|
||||
# TODO: add back '+hiop' when it is no longer linked with tcmalloc* through
|
||||
# its magma dependency.
|
||||
# TODO: add back '+ginkgo' when the Ginkgo example works.
|
||||
${mfem}'+rocm+openmp+raja+occa+libceed amdgpu_target='"${rocm_arch}"' \
|
||||
+superlu-dist+strumpack+suite-sparse+gslib+petsc+slepc \
|
||||
+sundials+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit \
|
||||
+sundials+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo \
|
||||
^raja+rocm~openmp ^occa~cuda'" $strumpack_rocm_spec"' \
|
||||
'"$superlu_rocm_spec $petsc_spec_rocm $conduit_spec"
|
||||
|
||||
${mfem}'+rocm amdgpu_target='"${rocm_arch}"' +raja+umpire'
|
||||
|
||||
# hiop needs older versions of raja, umpire, etc
|
||||
# TODO: combine this spec with the above spec when the combined spec works.
|
||||
${mfem}'+rocm amdgpu_target='"${rocm_arch}"' +hiop'
|
||||
|
||||
# hypre with rocm:
|
||||
# TODO: add back "+petsc+slepc $petsc_spec_rocm" when it works.
|
||||
# TODO: add back '+hiop' when it is no longer linked with tcmalloc* through
|
||||
# its magma dependency.
|
||||
# TODO: add back '+ginkgo' when the Ginkgo example works.
|
||||
# TODO: add back "+sundials" when it's supported with '^hypre+rocm'.
|
||||
${mfem}'+rocm+openmp+raja+occa+libceed amdgpu_target='"${rocm_arch}"' \
|
||||
+superlu-dist+strumpack+suite-sparse+gslib \
|
||||
+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit \
|
||||
+pumi+mpfr+netcdf+zlib+gnutls+libunwind+conduit+ginkgo \
|
||||
^raja+rocm~openmp ^occa~cuda ^hypre+rocm \
|
||||
'"$strumpack_rocm_spec $superlu_rocm_spec $conduit_spec"
|
||||
|
||||
${mfem}'+rocm amdgpu_target='"${rocm_arch}"' +raja+umpire ^hypre+rocm'
|
||||
|
||||
# hiop needs older versions of raja, umpire, etc
|
||||
# TODO: combine this spec with the above spec when the combined spec works.
|
||||
${mfem}'+rocm amdgpu_target='"${rocm_arch}"' +hiop ^hypre+rocm'
|
||||
|
||||
${mfem}' precision=single +rocm amdgpu_target='"${rocm_arch}"' ^hypre+rocm'
|
||||
|
||||
#
|
||||
# same builds as above with ${mfem_dev}
|
||||
#
|
||||
@@ -244,6 +298,8 @@ run_builds=("${builds[@]}" "${builds2[@]}")
|
||||
|
||||
# PETSc CUDA tests on Lassen need this:
|
||||
# export PETSC_OPTIONS="-use_gpu_aware_mpi 0"
|
||||
# STRUMPACK forces "^openblas threads=openmp" when using openblas:
|
||||
export OMP_NUM_THREADS=1
|
||||
|
||||
# spack files to clean in "$mfem_src_dir" when using 'dev-build'
|
||||
clean_files=(
|
||||
|
@@ -613,6 +613,10 @@ def configure_options(self):
|
||||
if "superlu-dist" in spec:
|
||||
if spec.satisfies("@3.10.3:3.15"):
|
||||
options.append("--with-cxx-dialect=C++11")
|
||||
if spec["superlu-dist"].satisfies("+rocm"):
|
||||
# Suppress HIP header warning message, otherwise the PETSc
|
||||
# configuration fails:
|
||||
options.append("CXXPPFLAGS=-DROCM_NO_WRAPPER_HEADER_WARNING")
|
||||
|
||||
if "+mkl-pardiso" in spec:
|
||||
options.append("--with-mkl_pardiso-dir=%s" % spec["mkl"].prefix)
|
||||
|
@@ -3,8 +3,6 @@
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from platform import machine
|
||||
|
||||
from spack.package import *
|
||||
from spack.util.environment import set_env
|
||||
|
||||
@@ -177,7 +175,13 @@ def cmake_args(self):
|
||||
|
||||
if "%cce" in spec:
|
||||
# Assume the proper Cray CCE module (cce) is loaded:
|
||||
craylibs_path = env["CRAYLIBS_" + machine().upper()]
|
||||
craylibs_var = "CRAYLIBS_" + str(spec.target.family).upper()
|
||||
craylibs_path = env.get(craylibs_var, None)
|
||||
if not craylibs_path:
|
||||
raise InstallError(
|
||||
f"The environment variable {craylibs_var} is not defined.\n"
|
||||
"\tMake sure the 'cce' module is in the compiler spec."
|
||||
)
|
||||
env.setdefault("LDFLAGS", "")
|
||||
env["LDFLAGS"] += " -Wl,-rpath," + craylibs_path
|
||||
|
||||
|
@@ -3,6 +3,8 @@
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
import os.path
|
||||
|
||||
from spack.package import *
|
||||
|
||||
|
||||
@@ -189,6 +191,7 @@ def install(self, spec, prefix):
|
||||
# even though this fix is ugly
|
||||
f"BLAS={spec['blas'].libs.ld_flags + (' -lstdc++' if '@4.5.1' in spec else '')}",
|
||||
f"LAPACK={spec['lapack'].libs.ld_flags}",
|
||||
f"JOBS={make_jobs}",
|
||||
]
|
||||
|
||||
# Recent versions require c11 but some demos do not get the c11 from
|
||||
@@ -229,21 +232,45 @@ def install(self, spec, prefix):
|
||||
# Without CMAKE_LIBRARY_PATH defined, the CMake file in the
|
||||
# Mongoose directory finds libsuitesparseconfig.so in system
|
||||
# directories like /usr/lib.
|
||||
make_args += [
|
||||
f"CMAKE_OPTIONS=-DCMAKE_INSTALL_PREFIX={prefix}"
|
||||
+ f" -DCMAKE_LIBRARY_PATH={prefix.lib}"
|
||||
+ f" -DBLAS_ROOT={spec['blas'].prefix}"
|
||||
+ f" -DLAPACK_ROOT={spec['lapack'].prefix}"
|
||||
cmake_args = [
|
||||
f"-DCMAKE_INSTALL_PREFIX={prefix}",
|
||||
f"-DCMAKE_LIBRARY_PATH={prefix.lib}",
|
||||
f"-DBLAS_ROOT={spec['blas'].prefix}",
|
||||
f"-DLAPACK_ROOT={spec['lapack'].prefix}",
|
||||
# *_LIBRARIES is critical to pick up static
|
||||
# libraries (if intended) and also to avoid
|
||||
# unintentional system blas/lapack packages
|
||||
+ f" -DBLAS_LIBRARIES={spec['blas'].libs}"
|
||||
+ f" -DLAPACK_LIBRARIES={spec['lapack'].libs}"
|
||||
f'-DBLAS_LIBRARIES="{";".join(spec["blas"].libs)}"',
|
||||
f'-DLAPACK_LIBRARIES="{";".join(spec["lapack"].libs)}"',
|
||||
"-DCMAKE_VERBOSE_MAKEFILE=ON",
|
||||
]
|
||||
if spec.satisfies("@:7.3"):
|
||||
cmake_args += [
|
||||
f"-DNOPENMP={'OFF' if '+openmp' in spec else 'ON'}",
|
||||
f"-DENABLE_CUDA={'ON' if '+cuda' in spec else 'OFF'}",
|
||||
]
|
||||
else:
|
||||
cmake_args += [
|
||||
f"-DSUITESPARSE_USE_OPENMP={'ON' if '+openmp' in spec else 'OFF'}",
|
||||
f"-DSUITESPARSE_USE_CUDA={'ON' if '+cuda' in spec else 'OFF'}",
|
||||
]
|
||||
make_args += [f"CMAKE_OPTIONS={' '.join(cmake_args)}"]
|
||||
|
||||
if spec.satisfies("%gcc platform=darwin"):
|
||||
make_args += ["LDLIBS=-lm"]
|
||||
|
||||
if "%cce" in spec:
|
||||
# Assume the proper Cray CCE module (cce) is loaded:
|
||||
craylibs_var = "CRAYLIBS_" + str(spec.target.family).upper()
|
||||
craylibs_path = env.get(craylibs_var, None)
|
||||
if not craylibs_path:
|
||||
raise InstallError(
|
||||
f"The environment variable {craylibs_var} is not defined.\n"
|
||||
"\tMake sure the 'cce' module is in the compiler spec."
|
||||
)
|
||||
env.setdefault("LDFLAGS", "")
|
||||
env["LDFLAGS"] += " -Wl,-rpath," + craylibs_path
|
||||
|
||||
make_args.append(f"INSTALL={prefix}")
|
||||
|
||||
# Filter the targets we're interested in
|
||||
@@ -278,6 +305,16 @@ def install(self, spec, prefix):
|
||||
make("-C", target, "library", *make_args)
|
||||
make("-C", target, "install", *make_args)
|
||||
|
||||
# Starting with v7.4.0 headers are installed in a subdirectory called
|
||||
# 'suitesparse' by default. For backward compatibility, after
|
||||
# installation, we create links for all files from 'suitesparse' in the
|
||||
# containing directory, '<prefix>/include':
|
||||
if spec.satisfies("@7.4:"):
|
||||
with working_dir(prefix.include):
|
||||
for f in find("suitesparse", "*", recursive=False):
|
||||
sf = os.path.basename(f)
|
||||
symlink(join_path("suitesparse", sf), sf)
|
||||
|
||||
@run_after("install")
|
||||
def fix_darwin_install(self):
|
||||
# The shared libraries are not installed correctly on Darwin:
|
||||
|
@@ -76,11 +76,12 @@ def libs(self):
|
||||
def flag_handler(self, name, flags):
|
||||
if name == "cflags" and self.spec.satisfies("+pic build_system=autotools"):
|
||||
flags.append(self.compiler.cc_pic_flag)
|
||||
if name == "ldflags" and self.spec.satisfies("%cce@17"):
|
||||
flags.append("-Wl,--undefined-version")
|
||||
return (flags, None, None)
|
||||
|
||||
|
||||
class AutotoolsBuilder(autotools.AutotoolsBuilder):
|
||||
|
||||
@run_before("configure")
|
||||
def pretend_gcc(self):
|
||||
# All nice things (PIC flags, symbol versioning) that happen to the compilers that are
|
||||
|
Reference in New Issue
Block a user