r-sseq: new package at 1.20.0 (#10042)
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		 Justin Stanley
					Justin Stanley
				
			
				
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						 Adam J. Stewart
						Adam J. Stewart
					
				
			
			
				
	
			
			
			 Adam J. Stewart
						Adam J. Stewart
					
				
			
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								var/spack/repos/builtin/packages/r-sseq/package.py
									
									
									
									
									
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								var/spack/repos/builtin/packages/r-sseq/package.py
									
									
									
									
									
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|  | # Copyright 2013-2018 Lawrence Livermore National Security, LLC and other | ||||||
|  | # Spack Project Developers. See the top-level COPYRIGHT file for details. | ||||||
|  | # | ||||||
|  | # SPDX-License-Identifier: (Apache-2.0 OR MIT) | ||||||
|  |  | ||||||
|  | from spack import * | ||||||
|  |  | ||||||
|  |  | ||||||
|  | class RSseq(RPackage): | ||||||
|  |     """Shrinkage estimation of dispersion in Negative Binomial models for | ||||||
|  |        RNA-seq experiments with small sample size""" | ||||||
|  |  | ||||||
|  |     homepage = "https://www.bioconductor.org/packages/sSeq/" | ||||||
|  |     url      = "https://www.bioconductor.org/packages/release/bioc/src/contrib/sSeq_1.20.0.tar.gz" | ||||||
|  |  | ||||||
|  |     version('1.20.0', sha256='0fddcb238a6c401987843debe5b46dc03c22a1ee04df670f0d502e86a4f2144f') | ||||||
|  |  | ||||||
|  |     depends_on('r@3.0:', type=('build', 'run')) | ||||||
|  |     depends_on('r-catools', type=('build', 'run')) | ||||||
|  |     depends_on('r-rcolorbrewer', type=('build', 'run')) | ||||||
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