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Tower Agent / Tower CLI: new packages (#31539)

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Marco De La Pierre 2022-07-13 15:05:03 +08:00 committed by GitHub
parent 7f2b5e8e57
commit 79f67ba92b
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3 changed files with 64 additions and 0 deletions
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1
var/spack/repos/builtin/packages/nextflow/package.py
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@ -14,6 +14,7 @@ class Nextflow(Package):
maintainers = ['dialvarezs']
version('22.04.4', sha256='e5ebf9942af4569db9199e8528016d9a52f73010ed476049774a76b201cd4b10', expand=False)
version('22.04.3', sha256='a1a79c619200b9f2719e8467cd5b8fbcb427f43adf945233ba9e03cd2f2d814e', expand=False)
version('22.04.1', sha256='89ef482a53d2866a3cee84b3576053278b53507bde62db4ad05b1fcd63a9368a', expand=False)
version('22.04.0', sha256='8eba475aa395438ed222ff14df8fbe93928c14ffc68727a15b8308178edf9056', expand=False)

29
var/spack/repos/builtin/packages/tower-agent/package.py Normal file
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@ -0,0 +1,29 @@
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import platform
from spack.package import *
class TowerAgent(Package):
"""Tower Agent allows Nextflow Tower to launch pipelines
on HPC clusters that do not allow direct access through
an SSH client.
"""
homepage = "https://github.com/seqeralabs/tower-agent"
if platform.machine() == 'x86_64':
if platform.system() == 'Linux':
version('0.4.3',
sha256='1125e64d4e3342e77fcf7f6827f045e421084654fe8faafd5389e356e0613cc0',
url='https://github.com/seqeralabs/tower-agent/releases/download/v0.4.3/tw-agent-linux-x86_64',
expand=False)
def install(self, spec, prefix):
mkdirp(prefix.bin)
install(self.stage.archive_file, join_path(prefix.bin, "tw-agent"))
set_executable(join_path(prefix.bin, "tw-agent"))

34
var/spack/repos/builtin/packages/tower-cli/package.py Normal file
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@ -0,0 +1,34 @@
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import platform
from spack.package import *
class TowerCli(Package):
"""Tower on the Command Line brings Nextflow Tower concepts
including Pipelines, Actions and Compute Environments
to the terminal.
"""
homepage = "https://github.com/seqeralabs/tower-cli"
if platform.machine() == 'x86_64':
if platform.system() == 'Darwin':
version('0.6.2',
sha256='2bcc17687d58d4c888e8d57b7f2f769a2940afb3266dc3c6c48b0af0cb490d91',
url='https://github.com/seqeralabs/tower-cli/releases/download/v0.6.2/tw-0.6.2-osx-x86_64',
expand=False)
elif platform.system() == 'Linux':
version('0.6.2',
sha256='02c6d141416b046b6e8b6f9723331fe0e39d37faa3561c47c152df4d33b37e50',
url='https://github.com/seqeralabs/tower-cli/releases/download/v0.6.2/tw-0.6.2-linux-x86_64',
expand=False)
def install(self, spec, prefix):
mkdirp(prefix.bin)
install(self.stage.archive_file, join_path(prefix.bin, "tw"))
set_executable(join_path(prefix.bin, "tw"))