Removing NCEP Post (ncep-post). (#26749)
UPP and ncep-post are the same package, so this PR removes the duplication. ncep-post was originally named after the upstream repo that now changed its name to UPP.
This commit is contained in:
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@ -1,350 +0,0 @@
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--- a/CMakeModules/Modules/FindNetCDF.cmake 2021-07-26 07:16:22.760999830 -0600
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+++ b/CMakeModules/Modules/FindNetCDF.cmake 2021-05-21 09:22:26.000000000 -0600
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@@ -0,0 +1,347 @@
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+# (C) Copyright 2011- ECMWF.
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+#
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+# This software is licensed under the terms of the Apache Licence Version 2.0
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+# which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
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+# In applying this licence, ECMWF does not waive the privileges and immunities
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+# granted to it by virtue of its status as an intergovernmental organisation nor
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+# does it submit to any jurisdiction.
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+
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+# Try to find NetCDF includes and library.
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+# Supports static and shared libaries and allows each component to be found in sepearte prefixes.
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+#
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+# This module defines
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+#
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+# - NetCDF_FOUND - System has NetCDF
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+# - NetCDF_INCLUDE_DIRS - the NetCDF include directories
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+# - NetCDF_VERSION - the version of NetCDF
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+# - NetCDF_CONFIG_EXECUTABLE - the netcdf-config executable if found
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+# - NetCDF_PARALLEL - Boolean True if NetCDF4 has parallel IO support via hdf5 and/or pnetcdf
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+# - NetCDF_HAS_PNETCDF - Boolean True if NetCDF4 has pnetcdf support
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+#
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+# Deprecated Defines
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+# - NetCDF_LIBRARIES - [Deprecated] Use NetCDF::NetCDF_<LANG> targets instead.
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+#
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+#
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+# Following components are available:
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+#
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+# - C - C interface to NetCDF (netcdf)
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+# - CXX - CXX4 interface to NetCDF (netcdf_c++4)
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+# - Fortran - Fortran interface to NetCDF (netcdff)
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+#
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+# For each component the following are defined:
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+#
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+# - NetCDF_<comp>_FOUND - whether the component is found
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+# - NetCDF_<comp>_LIBRARIES - the libraries for the component
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+# - NetCDF_<comp>_LIBRARY_SHARED - Boolean is true if libraries for component are shared
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+# - NetCDF_<comp>_INCLUDE_DIRS - the include directories for specified component
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+# - NetCDF::NetCDF_<comp> - target of component to be used with target_link_libraries()
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+#
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+# The following paths will be searched in order if set in CMake (first priority) or environment (second priority)
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+#
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+# - NetCDF_ROOT - root of NetCDF installation
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+# - NetCDF_PATH - root of NetCDF installation
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+#
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+# The search process begins with locating NetCDF Include headers. If these are in a non-standard location,
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+# set one of the following CMake or environment variables to point to the location:
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+#
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+# - NetCDF_INCLUDE_DIR or NetCDF_${comp}_INCLUDE_DIR
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+# - NetCDF_INCLUDE_DIRS or NetCDF_${comp}_INCLUDE_DIR
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+#
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+# Notes:
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+#
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+# - Use "NetCDF::NetCDF_<LANG>" targets only. NetCDF_LIBRARIES exists for backwards compatibility and should not be used.
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+# - These targets have all the knowledge of include directories and library search directories, and a single
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+# call to target_link_libraries will provide all these transitive properties to your target. Normally all that is
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+# needed to build and link against NetCDF is, e.g.:
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+# target_link_libraries(my_c_tgt PUBLIC NetCDF::NetCDF_C)
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+# - "NetCDF" is always the preferred naming for this package, its targets, variables, and environment variables
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+# - For compatibility, some variables are also set/checked using alternate names NetCDF4, NETCDF, or NETCDF4
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+# - Environments relying on these older environment variable names should move to using a "NetCDF_ROOT" environment variable
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+# - Preferred component capitalization follows the CMake LANGUAGES variables: i.e., C, Fortran, CXX
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+# - For compatibility, alternate capitalizations are supported but should not be used.
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+# - If no components are defined, all components will be searched
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+#
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+
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+list( APPEND _possible_components C CXX Fortran )
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+
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+## Include names for each component
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+set( NetCDF_C_INCLUDE_NAME netcdf.h )
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+set( NetCDF_CXX_INCLUDE_NAME netcdf )
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+set( NetCDF_Fortran_INCLUDE_NAME netcdf.mod )
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+
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+## Library names for each component
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+set( NetCDF_C_LIBRARY_NAME netcdf )
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+set( NetCDF_CXX_LIBRARY_NAME netcdf_c++4 )
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+set( NetCDF_Fortran_LIBRARY_NAME netcdff )
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+
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+## Enumerate search components
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+foreach( _comp ${_possible_components} )
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+ string( TOUPPER "${_comp}" _COMP )
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+ set( _arg_${_COMP} ${_comp} )
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+ set( _name_${_COMP} ${_comp} )
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+endforeach()
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+
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+set( _search_components C)
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+foreach( _comp ${${CMAKE_FIND_PACKAGE_NAME}_FIND_COMPONENTS} )
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+ string( TOUPPER "${_comp}" _COMP )
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+ set( _arg_${_COMP} ${_comp} )
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+ list( APPEND _search_components ${_name_${_COMP}} )
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+ if( NOT _name_${_COMP} )
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+ message(SEND_ERROR "Find${CMAKE_FIND_PACKAGE_NAME}: COMPONENT ${_comp} is not a valid component. Valid components: ${_possible_components}" )
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+ endif()
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+endforeach()
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+list( REMOVE_DUPLICATES _search_components )
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+
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+## Search hints for finding include directories and libraries
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+foreach( _comp IN ITEMS "_" "_C_" "_Fortran_" "_CXX_" )
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+ foreach( _name IN ITEMS NetCDF4 NetCDF NETCDF4 NETCDF )
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+ foreach( _var IN ITEMS ROOT PATH )
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+ list(APPEND _search_hints ${${_name}${_comp}${_var}} $ENV{${_name}${_comp}${_var}} )
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+ list(APPEND _include_search_hints
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+ ${${_name}${_comp}INCLUDE_DIR} $ENV{${_name}${_comp}INCLUDE_DIR}
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+ ${${_name}${_comp}INCLUDE_DIRS} $ENV{${_name}${_comp}INCLUDE_DIRS} )
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+ endforeach()
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+ endforeach()
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+endforeach()
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+#Old-school HPC module env variable names
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+foreach( _name IN ITEMS NetCDF4 NetCDF NETCDF4 NETCDF )
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+ foreach( _comp IN ITEMS "_C" "_Fortran" "_CXX" )
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+ list(APPEND _search_hints ${${_name}} $ENV{${_name}})
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+ list(APPEND _search_hints ${${_name}${_comp}} $ENV{${_name}${_comp}})
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+ endforeach()
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+endforeach()
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+
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+## Find headers for each component
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+set(NetCDF_INCLUDE_DIRS)
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+set(_new_search_components)
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+foreach( _comp IN LISTS _search_components )
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+ if(NOT ${PROJECT_NAME}_NetCDF_${_comp}_FOUND)
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+ list(APPEND _new_search_components ${_comp})
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+ endif()
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+ find_file(NetCDF_${_comp}_INCLUDE_FILE
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+ NAMES ${NetCDF_${_comp}_INCLUDE_NAME}
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+ DOC "NetCDF ${_comp} include directory"
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+ HINTS ${_include_search_hints} ${_search_hints}
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+ PATH_SUFFIXES include include/netcdf
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+ )
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+ mark_as_advanced(NetCDF_${_comp}_INCLUDE_FILE)
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+ message(DEBUG "NetCDF_${_comp}_INCLUDE_FILE: ${NetCDF_${_comp}_INCLUDE_FILE}")
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+ if( NetCDF_${_comp}_INCLUDE_FILE )
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+ get_filename_component(NetCDF_${_comp}_INCLUDE_FILE ${NetCDF_${_comp}_INCLUDE_FILE} ABSOLUTE)
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+ get_filename_component(NetCDF_${_comp}_INCLUDE_DIR ${NetCDF_${_comp}_INCLUDE_FILE} DIRECTORY)
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+ list(APPEND NetCDF_INCLUDE_DIRS ${NetCDF_${_comp}_INCLUDE_DIR})
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+ endif()
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+endforeach()
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+if(NetCDF_INCLUDE_DIRS)
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+ list(REMOVE_DUPLICATES NetCDF_INCLUDE_DIRS)
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+endif()
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+set(NetCDF_INCLUDE_DIRS "${NetCDF_INCLUDE_DIRS}" CACHE STRING "NetCDF Include directory paths" FORCE)
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+
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+## Find n*-config executables for search components
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+foreach( _comp IN LISTS _search_components )
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+ if( _comp MATCHES "^(C)$" )
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+ set(_conf "c")
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+ elseif( _comp MATCHES "^(Fortran)$" )
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+ set(_conf "f")
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+ elseif( _comp MATCHES "^(CXX)$" )
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+ set(_conf "cxx4")
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+ endif()
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+ find_program( NetCDF_${_comp}_CONFIG_EXECUTABLE
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+ NAMES n${_conf}-config
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+ HINTS ${NetCDF_INCLUDE_DIRS} ${_include_search_hints} ${_search_hints}
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+ PATH_SUFFIXES bin Bin ../bin ../../bin
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+ DOC "NetCDF n${_conf}-config helper" )
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+ message(DEBUG "NetCDF_${_comp}_CONFIG_EXECUTABLE: ${NetCDF_${_comp}_CONFIG_EXECUTABLE}")
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+endforeach()
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+
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+set(_C_libs_flag --libs)
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+set(_Fortran_libs_flag --flibs)
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+set(_CXX_libs_flag --libs)
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+set(_C_includes_flag --includedir)
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+set(_Fortran_includes_flag --includedir)
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+set(_CXX_includes_flag --includedir)
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+function(netcdf_config exec flag output_var)
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+ set(${output_var} False PARENT_SCOPE)
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+ if( exec )
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+ execute_process( COMMAND ${exec} ${flag} RESULT_VARIABLE _ret OUTPUT_VARIABLE _val)
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+ if( _ret EQUAL 0 )
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+ string( STRIP ${_val} _val )
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+ set( ${output_var} ${_val} PARENT_SCOPE )
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+ endif()
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+ endif()
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+endfunction()
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+
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+## Detect additional package properties
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+netcdf_config(${NetCDF_C_CONFIG_EXECUTABLE} --has-parallel4 _val)
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+if( NOT _val MATCHES "^(yes|no)$" )
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+ netcdf_config(${NetCDF_C_CONFIG_EXECUTABLE} --has-parallel _val)
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+endif()
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+if( _val MATCHES "^(yes)$" )
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+ set(NetCDF_PARALLEL TRUE CACHE STRING "NetCDF has parallel IO capability via pnetcdf or hdf5." FORCE)
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+else()
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+ set(NetCDF_PARALLEL FALSE CACHE STRING "NetCDF has no parallel IO capability." FORCE)
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+endif()
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+
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+if(NetCDF_PARALLEL)
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+ find_package(MPI REQUIRED)
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+endif()
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+
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+## Find libraries for each component
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+set( NetCDF_LIBRARIES )
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+foreach( _comp IN LISTS _search_components )
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+ string( TOUPPER "${_comp}" _COMP )
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+
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+ find_library( NetCDF_${_comp}_LIBRARY
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+ NAMES ${NetCDF_${_comp}_LIBRARY_NAME}
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+ DOC "NetCDF ${_comp} library"
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+ HINTS ${NetCDF_${_comp}_INCLUDE_DIRS} ${_search_hints}
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+ PATH_SUFFIXES lib64 lib ../lib64 ../lib ../../lib64 ../../lib )
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+ mark_as_advanced( NetCDF_${_comp}_LIBRARY )
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+ get_filename_component(NetCDF_${_comp}_LIBRARY ${NetCDF_${_comp}_LIBRARY} ABSOLUTE)
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+ set(NetCDF_${_comp}_LIBRARY ${NetCDF_${_comp}_LIBRARY} CACHE STRING "NetCDF ${_comp} library" FORCE)
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+ message(DEBUG "NetCDF_${_comp}_LIBRARY: ${NetCDF_${_comp}_LIBRARY}")
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+
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+ if( NetCDF_${_comp}_LIBRARY )
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+ if( NetCDF_${_comp}_LIBRARY MATCHES ".a$" )
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+ set( NetCDF_${_comp}_LIBRARY_SHARED FALSE )
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+ set( _library_type STATIC)
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+ else()
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+ list( APPEND NetCDF_LIBRARIES ${NetCDF_${_comp}_LIBRARY} )
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+ set( NetCDF_${_comp}_LIBRARY_SHARED TRUE )
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+ set( _library_type SHARED)
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+ endif()
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+ endif()
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+
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+ #Use nc-config to set per-component LIBRARIES variable if possible
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+ netcdf_config( ${NetCDF_${_comp}_CONFIG_EXECUTABLE} ${_${_comp}_libs_flag} _val )
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+ if( _val )
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+ set( NetCDF_${_comp}_LIBRARIES ${_val} )
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+ if(NOT NetCDF_${_comp}_LIBRARY_SHARED AND NOT NetCDF_${_comp}_FOUND) #Static targets should use nc_config to get a proper link line with all necessary static targets.
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+ list( APPEND NetCDF_LIBRARIES ${NetCDF_${_comp}_LIBRARIES} )
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+ endif()
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+ else()
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+ set( NetCDF_${_comp}_LIBRARIES ${NetCDF_${_comp}_LIBRARY} )
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+ if(NOT NetCDF_${_comp}_LIBRARY_SHARED)
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+ message(SEND_ERROR "Unable to properly find NetCDF. Found static libraries at: ${NetCDF_${_comp}_LIBRARY} but could not run nc-config: ${NetCDF_CONFIG_EXECUTABLE}")
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+ endif()
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+ endif()
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+
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+ #Use nc-config to set per-component INCLUDE_DIRS variable if possible
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+ netcdf_config( ${NetCDF_${_comp}_CONFIG_EXECUTABLE} ${_${_comp}_includes_flag} _val )
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+ if( _val )
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+ string( REPLACE " " ";" _val ${_val} )
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+ set( NetCDF_${_comp}_INCLUDE_DIRS ${_val} )
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+ else()
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+ set( NetCDF_${_comp}_INCLUDE_DIRS ${NetCDF_${_comp}_INCLUDE_DIR} )
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+ endif()
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+
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+ if( NetCDF_${_comp}_LIBRARIES AND NetCDF_${_comp}_INCLUDE_DIRS )
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+ set( ${CMAKE_FIND_PACKAGE_NAME}_${_arg_${_COMP}}_FOUND TRUE )
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+ if (NOT TARGET NetCDF::NetCDF_${_comp})
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+ add_library(NetCDF::NetCDF_${_comp} ${_library_type} IMPORTED)
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+ set_target_properties(NetCDF::NetCDF_${_comp} PROPERTIES
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+ IMPORTED_LOCATION ${NetCDF_${_comp}_LIBRARY}
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+ INTERFACE_INCLUDE_DIRECTORIES "${NetCDF_${_comp}_INCLUDE_DIRS}"
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+ INTERFACE_LINK_LIBRARIES ${NetCDF_${_comp}_LIBRARIES} )
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+ if( NOT _comp MATCHES "^(C)$" )
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+ target_link_libraries(NetCDF::NetCDF_${_comp} INTERFACE NetCDF::NetCDF_C)
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+ endif()
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+ if(MPI_${_comp}_FOUND)
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+ target_link_libraries(NetCDF::NetCDF_${_comp} INTERFACE MPI::MPI_${_comp})
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+ endif()
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+ endif()
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+ endif()
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+endforeach()
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+if(NetCDF_LIBRARIES AND NetCDF_${_comp}_LIBRARY_SHARED)
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+ list(REMOVE_DUPLICATES NetCDF_LIBRARIES)
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+endif()
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+set(NetCDF_LIBRARIES "${NetCDF_LIBRARIES}" CACHE STRING "NetCDF library targets" FORCE)
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+
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+## Find version via netcdf-config if possible
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+if (NetCDF_INCLUDE_DIRS)
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+ if( NetCDF_C_CONFIG_EXECUTABLE )
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+ netcdf_config( ${NetCDF_C_CONFIG_EXECUTABLE} --version _vers )
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+ if( _vers )
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+ string(REGEX REPLACE ".* ((([0-9]+)\\.)+([0-9]+)).*" "\\1" NetCDF_VERSION "${_vers}" )
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+ endif()
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+ else()
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+ foreach( _dir IN LISTS NetCDF_INCLUDE_DIRS)
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+ if( EXISTS "${_dir}/netcdf_meta.h" )
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+ file(STRINGS "${_dir}/netcdf_meta.h" _netcdf_version_lines
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+ REGEX "#define[ \t]+NC_VERSION_(MAJOR|MINOR|PATCH|NOTE)")
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+ string(REGEX REPLACE ".*NC_VERSION_MAJOR *\([0-9]*\).*" "\\1" _netcdf_version_major "${_netcdf_version_lines}")
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+ string(REGEX REPLACE ".*NC_VERSION_MINOR *\([0-9]*\).*" "\\1" _netcdf_version_minor "${_netcdf_version_lines}")
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+ string(REGEX REPLACE ".*NC_VERSION_PATCH *\([0-9]*\).*" "\\1" _netcdf_version_patch "${_netcdf_version_lines}")
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+ string(REGEX REPLACE ".*NC_VERSION_NOTE *\"\([^\"]*\)\".*" "\\1" _netcdf_version_note "${_netcdf_version_lines}")
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+ set(NetCDF_VERSION "${_netcdf_version_major}.${_netcdf_version_minor}.${_netcdf_version_patch}${_netcdf_version_note}")
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+ unset(_netcdf_version_major)
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+ unset(_netcdf_version_minor)
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+ unset(_netcdf_version_patch)
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+ unset(_netcdf_version_note)
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+ unset(_netcdf_version_lines)
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+ endif()
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+ endforeach()
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+ endif()
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+endif ()
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+
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+## Finalize find_package
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+include(FindPackageHandleStandardArgs)
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+
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+if(NOT NetCDF_FOUND OR _new_search_components)
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+ find_package_handle_standard_args( ${CMAKE_FIND_PACKAGE_NAME}
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+ REQUIRED_VARS NetCDF_INCLUDE_DIRS NetCDF_LIBRARIES
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+ VERSION_VAR NetCDF_VERSION
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+ HANDLE_COMPONENTS )
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+endif()
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+
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+foreach( _comp IN LISTS _search_components )
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+ if( NetCDF_${_comp}_FOUND )
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+ #Record found components to avoid duplication in NetCDF_LIBRARIES for static libraries
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+ set(NetCDF_${_comp}_FOUND ${NetCDF_${_comp}_FOUND} CACHE BOOL "NetCDF ${_comp} Found" FORCE)
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+ #Set a per-package, per-component found variable to communicate between multiple calls to find_package()
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+ set(${PROJECT_NAME}_NetCDF_${_comp}_FOUND True)
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+ endif()
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+endforeach()
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+
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+if( ${CMAKE_FIND_PACKAGE_NAME}_FOUND AND NOT ${CMAKE_FIND_PACKAGE_NAME}_FIND_QUIETLY AND _new_search_components)
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+ message( STATUS "Find${CMAKE_FIND_PACKAGE_NAME} defines targets:" )
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+ message( STATUS " - NetCDF_VERSION [${NetCDF_VERSION}]")
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+ message( STATUS " - NetCDF_PARALLEL [${NetCDF_PARALLEL}]")
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+ foreach( _comp IN LISTS _new_search_components )
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+ string( TOUPPER "${_comp}" _COMP )
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+ message( STATUS " - NetCDF_${_comp}_CONFIG_EXECUTABLE [${NetCDF_${_comp}_CONFIG_EXECUTABLE}]")
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+ if( ${CMAKE_FIND_PACKAGE_NAME}_${_arg_${_COMP}}_FOUND )
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+ get_filename_component(_root ${NetCDF_${_comp}_INCLUDE_DIR}/.. ABSOLUTE)
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+ if( NetCDF_${_comp}_LIBRARY_SHARED )
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||||
+ message( STATUS " - NetCDF::NetCDF_${_comp} [SHARED] [Root: ${_root}] Lib: ${NetCDF_${_comp}_LIBRARY} ")
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||||
+ else()
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||||
+ message( STATUS " - NetCDF::NetCDF_${_comp} [STATIC] [Root: ${_root}] Lib: ${NetCDF_${_comp}_LIBRARY} ")
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||||
+ endif()
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||||
+ endif()
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||||
+ endforeach()
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||||
+endif()
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||||
+
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||||
+foreach( _prefix NetCDF NetCDF4 NETCDF NETCDF4 ${CMAKE_FIND_PACKAGE_NAME} )
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||||
+ set( ${_prefix}_INCLUDE_DIRS ${NetCDF_INCLUDE_DIRS} )
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||||
+ set( ${_prefix}_LIBRARIES ${NetCDF_LIBRARIES})
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||||
+ set( ${_prefix}_VERSION ${NetCDF_VERSION} )
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+ set( ${_prefix}_FOUND ${${CMAKE_FIND_PACKAGE_NAME}_FOUND} )
|
||||
+ set( ${_prefix}_CONFIG_EXECUTABLE ${NetCDF_CONFIG_EXECUTABLE} )
|
||||
+ set( ${_prefix}_PARALLEL ${NetCDF_PARALLEL} )
|
||||
+
|
||||
+ foreach( _comp ${_search_components} )
|
||||
+ string( TOUPPER "${_comp}" _COMP )
|
||||
+ set( _arg_comp ${_arg_${_COMP}} )
|
||||
+ set( ${_prefix}_${_comp}_FOUND ${${CMAKE_FIND_PACKAGE_NAME}_${_arg_comp}_FOUND} )
|
||||
+ set( ${_prefix}_${_COMP}_FOUND ${${CMAKE_FIND_PACKAGE_NAME}_${_arg_comp}_FOUND} )
|
||||
+ set( ${_prefix}_${_arg_comp}_FOUND ${${CMAKE_FIND_PACKAGE_NAME}_${_arg_comp}_FOUND} )
|
||||
+
|
||||
+ set( ${_prefix}_${_comp}_LIBRARIES ${NetCDF_${_comp}_LIBRARIES} )
|
||||
+ set( ${_prefix}_${_COMP}_LIBRARIES ${NetCDF_${_comp}_LIBRARIES} )
|
||||
+ set( ${_prefix}_${_arg_comp}_LIBRARIES ${NetCDF_${_comp}_LIBRARIES} )
|
||||
+
|
||||
+ set( ${_prefix}_${_comp}_INCLUDE_DIRS ${NetCDF_${_comp}_INCLUDE_DIRS} )
|
||||
+ set( ${_prefix}_${_COMP}_INCLUDE_DIRS ${NetCDF_${_comp}_INCLUDE_DIRS} )
|
||||
+ set( ${_prefix}_${_arg_comp}_INCLUDE_DIRS ${NetCDF_${_comp}_INCLUDE_DIRS} )
|
||||
+ endforeach()
|
||||
+endforeach()
|
@ -1,49 +0,0 @@
|
||||
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class NcepPost(CMakePackage):
|
||||
"""The NCEP Post Processor is a software package designed
|
||||
to generate useful products from raw model output."""
|
||||
|
||||
homepage = "https://github.com/NOAA-EMC/EMC_post"
|
||||
url = "https://github.com/NOAA-EMC/EMC_post/archive/refs/tags/upp_v10.0.8.tar.gz"
|
||||
|
||||
maintainers = ['t-brown']
|
||||
|
||||
version('10.0.8', sha256='b3b27d03250450159a8261c499d57168bdd833790c1c80c854d081fe37aaab47')
|
||||
|
||||
variant('wrf-io', default=True, description='Enable WRF I/O.')
|
||||
|
||||
depends_on('bacio')
|
||||
depends_on('crtm')
|
||||
depends_on('g2')
|
||||
depends_on('g2tmpl')
|
||||
depends_on('gfsio')
|
||||
depends_on('ip')
|
||||
depends_on('jasper')
|
||||
depends_on('libpng')
|
||||
depends_on('mpi')
|
||||
depends_on('netcdf-c')
|
||||
depends_on('netcdf-fortran')
|
||||
depends_on('nemsio')
|
||||
depends_on('sfcio')
|
||||
depends_on('sigio')
|
||||
depends_on('sp')
|
||||
depends_on('w3emc')
|
||||
depends_on('w3nco')
|
||||
depends_on('w3nco')
|
||||
depends_on('wrf-io', when='+wrf-io')
|
||||
depends_on('zlib')
|
||||
|
||||
patch('cmake_findnetcdf.patch')
|
||||
|
||||
def cmake_args(self):
|
||||
args = []
|
||||
if '+wrf-io' in self.spec:
|
||||
args.append('-DBUILD_WITH_WRFIO:BOOL=ON')
|
||||
return args
|
Loading…
Reference in New Issue
Block a user