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Remove usernames from paths in docs (#2675)

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* Remove usernames from paths in docs

* Fix path export
This commit is contained in:
Adam J. Stewart 2016-12-25 15:36:35 -05:00 committed by Todd Gamblin
parent 8fe5fb7988
commit 7e8767e3fd
9 changed files with 303 additions and 303 deletions
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36
lib/spack/docs/basic_usage.rst
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@ -123,13 +123,13 @@ that the packages is installed:
$ spack install mpileaks $ spack install mpileaks
==> Installing mpileaks ==> Installing mpileaks
==> mpich is already installed in /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/mpich@3.0.4. ==> mpich is already installed in ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/mpich@3.0.4.
==> callpath is already installed in /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/callpath@1.0.2-5dce4318. ==> callpath is already installed in ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/callpath@1.0.2-5dce4318.
==> adept-utils is already installed in /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/adept-utils@1.0-5adef8da. ==> adept-utils is already installed in ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/adept-utils@1.0-5adef8da.
==> Trying to fetch from https://github.com/hpc/mpileaks/releases/download/v1.0/mpileaks-1.0.tar.gz ==> Trying to fetch from https://github.com/hpc/mpileaks/releases/download/v1.0/mpileaks-1.0.tar.gz
######################################################################## 100.0% ######################################################################## 100.0%
==> Staging archive: /home/gamblin2/spack/var/spack/stage/mpileaks@1.0%gcc@4.4.7 arch=linux-debian7-x86_64-59f6ad23/mpileaks-1.0.tar.gz ==> Staging archive: ~/spack/var/spack/stage/mpileaks@1.0%gcc@4.4.7 arch=linux-debian7-x86_64-59f6ad23/mpileaks-1.0.tar.gz
==> Created stage in /home/gamblin2/spack/var/spack/stage/mpileaks@1.0%gcc@4.4.7 arch=linux-debian7-x86_64-59f6ad23. ==> Created stage in ~/spack/var/spack/stage/mpileaks@1.0%gcc@4.4.7 arch=linux-debian7-x86_64-59f6ad23.
==> No patches needed for mpileaks. ==> No patches needed for mpileaks.
==> Building mpileaks. ==> Building mpileaks.
@ -137,7 +137,7 @@ that the packages is installed:
==> Successfully installed mpileaks. ==> Successfully installed mpileaks.
Fetch: 2.16s. Build: 9.82s. Total: 11.98s. Fetch: 2.16s. Build: 9.82s. Total: 11.98s.
[+] /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/mpileaks@1.0-59f6ad23 [+] ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/mpileaks@1.0-59f6ad23
The last line, with the ``[+]``, indicates where the package is The last line, with the ``[+]``, indicates where the package is
installed. installed.
@ -252,7 +252,7 @@ the tarballs in question to it (see :ref:`mirrors`):
.. code-block:: yaml .. code-block:: yaml
mirrors: mirrors:
manual: file:///home/me/.spack/manual_mirror manual: file://~/.spack/manual_mirror
#. Put your tarballs in it. Tarballs should be named #. Put your tarballs in it. Tarballs should be named
``<package>/<package>-<version>.tar.gz``. For example: ``<package>/<package>-<version>.tar.gz``. For example:
@ -374,13 +374,13 @@ use ``spack find --paths``:
$ spack find --paths $ spack find --paths
==> 74 installed packages. ==> 74 installed packages.
-- linux-debian7-x86_64 / gcc@4.4.7 -------------------------------- -- linux-debian7-x86_64 / gcc@4.4.7 --------------------------------
ImageMagick@6.8.9-10 /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/ImageMagick@6.8.9-10-4df950dd ImageMagick@6.8.9-10 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/ImageMagick@6.8.9-10-4df950dd
adept-utils@1.0 /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/adept-utils@1.0-5adef8da adept-utils@1.0 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/adept-utils@1.0-5adef8da
atk@2.14.0 /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/atk@2.14.0-3d09ac09 atk@2.14.0 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/atk@2.14.0-3d09ac09
boost@1.55.0 /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/boost@1.55.0 boost@1.55.0 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/boost@1.55.0
bzip2@1.0.6 /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/bzip2@1.0.6 bzip2@1.0.6 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/bzip2@1.0.6
cairo@1.14.0 /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/cairo@1.14.0-fcc2ab44 cairo@1.14.0 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/cairo@1.14.0-fcc2ab44
callpath@1.0.2 /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/callpath@1.0.2-5dce4318 callpath@1.0.2 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/callpath@1.0.2-5dce4318
... ...
And, finally, you can restrict your search to a particular package And, finally, you can restrict your search to a particular package
@ -390,9 +390,9 @@ by supplying its name:
$ spack find --paths libelf $ spack find --paths libelf
-- linux-debian7-x86_64 / gcc@4.4.7 -------------------------------- -- linux-debian7-x86_64 / gcc@4.4.7 --------------------------------
libelf@0.8.11 /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/libelf@0.8.11 libelf@0.8.11 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/libelf@0.8.11
libelf@0.8.12 /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/libelf@0.8.12 libelf@0.8.12 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/libelf@0.8.12
libelf@0.8.13 /home/gamblin2/spack/opt/linux-debian7-x86_64/gcc@4.4.7/libelf@0.8.13 libelf@0.8.13 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/libelf@0.8.13
``spack find`` actually does a lot more than this. You can use ``spack find`` actually does a lot more than this. You can use
*specs* to query for specific configurations and builds of each *specs* to query for specific configurations and builds of each
@ -900,7 +900,7 @@ prefixes, and you can see this with ``spack find --paths``:
$ spack find --paths py-numpy $ spack find --paths py-numpy
==> 1 installed packages. ==> 1 installed packages.
-- linux-debian7-x86_64 / gcc@4.4.7 -------------------------------- -- linux-debian7-x86_64 / gcc@4.4.7 --------------------------------
py-numpy@1.9.1 /g/g21/gamblin2/src/spack/opt/linux-debian7-x86_64/gcc@4.4.7/py-numpy@1.9.1-66733244 py-numpy@1.9.1 ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/py-numpy@1.9.1-66733244
However, even though this package is installed, you cannot use it However, even though this package is installed, you cannot use it
directly when you run ``python``: directly when you run ``python``:

12
lib/spack/docs/getting_started.rst
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@ -188,7 +188,7 @@ where the compiler is installed. For example:
.. code-block:: console .. code-block:: console
$ spack compiler find /usr/local/tools/ic-13.0.079 $ spack compiler find /usr/local/tools/ic-13.0.079
==> Added 1 new compiler to /Users/gamblin2/.spack/compilers.yaml ==> Added 1 new compiler to ~/.spack/compilers.yaml
intel@13.0.079 intel@13.0.079
Or you can run ``spack compiler find`` with no arguments to force Or you can run ``spack compiler find`` with no arguments to force
@ -200,7 +200,7 @@ installed, but you know that new compilers have been added to your
$ module load gcc-4.9.0 $ module load gcc-4.9.0
$ spack compiler find $ spack compiler find
==> Added 1 new compiler to /Users/gamblin2/.spack/compilers.yaml ==> Added 1 new compiler to ~/.spack/compilers.yaml
gcc@4.9.0 gcc@4.9.0
This loads the environment module for gcc-4.9.0 to add it to This loads the environment module for gcc-4.9.0 to add it to
@ -531,7 +531,7 @@ flags to the ``icc`` command:
.. code-block:: console .. code-block:: console
$ spack location --install-dir gcc $ spack location --install-dir gcc
/home2/rpfische/spack2/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw... ~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw...
#. Set up ``compilers.yaml``, for example: #. Set up ``compilers.yaml``, for example:
@ -543,12 +543,12 @@ flags to the ``icc`` command:
operating_system: centos7 operating_system: centos7
paths: paths:
cc: /opt/intel-15.0.24/bin/icc-15.0.24-beta cc: /opt/intel-15.0.24/bin/icc-15.0.24-beta
cflags: -gcc-name /home2/rpfische/spack2/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/gcc cflags: -gcc-name ~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/gcc
cxx: /opt/intel-15.0.24/bin/icpc-15.0.24-beta cxx: /opt/intel-15.0.24/bin/icpc-15.0.24-beta
cxxflags: -gxx-name /home2/rpfische/spack2/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/g++ cxxflags: -gxx-name ~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/g++
f77: /opt/intel-15.0.24/bin/ifort-15.0.24-beta f77: /opt/intel-15.0.24/bin/ifort-15.0.24-beta
fc: /opt/intel-15.0.24/bin/ifort-15.0.24-beta fc: /opt/intel-15.0.24/bin/ifort-15.0.24-beta
fflags: -gcc-name /home2/rpfische/spack2/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/gcc fflags: -gcc-name ~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/gcc
spec: intel@15.0.24.4.9.3 spec: intel@15.0.24.4.9.3

8
lib/spack/docs/mirrors.rst
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@ -166,7 +166,7 @@ a file, you can use a file URL like this one:
.. code-block:: none .. code-block:: none
file:///Users/gamblin2/spack-mirror-2014-06-24 file://~/spack-mirror-2014-06-24
That points to the directory on the local filesystem. If it were on a That points to the directory on the local filesystem. If it were on a
web server, you could use a URL like this one: web server, you could use a URL like this one:
@ -178,7 +178,7 @@ You can tell your Spack installation to use that mirror like this:
.. code-block:: console .. code-block:: console
$ spack mirror add local_filesystem file:///Users/gamblin2/spack-mirror-2014-06-24 $ spack mirror add local_filesystem file://~/spack-mirror-2014-06-24
Each mirror has a name so that you can refer to it again later. Each mirror has a name so that you can refer to it again later.
@ -193,7 +193,7 @@ To see all the mirrors Spack knows about, run ``spack mirror list``:
.. code-block:: console .. code-block:: console
$ spack mirror list $ spack mirror list
local_filesystem file:///Users/gamblin2/spack-mirror-2014-06-24 local_filesystem file://~/spack-mirror-2014-06-24
.. _spack-mirror-remove: .. _spack-mirror-remove:
@ -218,7 +218,7 @@ Adding a mirror really adds a line in ``~/.spack/mirrors.yaml``:
.. code-block:: yaml .. code-block:: yaml
mirrors: mirrors:
local_filesystem: file:///Users/gamblin2/spack-mirror-2014-06-24 local_filesystem: file://~/spack-mirror-2014-06-24
remote_server: https://example.com/some/web-hosted/directory/spack-mirror-2014-06-24 remote_server: https://example.com/some/web-hosted/directory/spack-mirror-2014-06-24
If you want to change the order in which mirrors are searched for If you want to change the order in which mirrors are searched for

4
lib/spack/docs/module_file_support.rst
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@ -63,7 +63,7 @@ of installed packages.
$ module avail $ module avail
------- /home/gamblin2/spack/share/spack/modules/linux-debian7-x86_64 -------- ------- ~/spack/share/spack/modules/linux-debian7-x86_64 --------
adept-utils@1.0%gcc@4.4.7-5adef8da libelf@0.8.13%gcc@4.4.7 adept-utils@1.0%gcc@4.4.7-5adef8da libelf@0.8.13%gcc@4.4.7
automaded@1.0%gcc@4.4.7-d9691bb0 libelf@0.8.13%intel@15.0.0 automaded@1.0%gcc@4.4.7-d9691bb0 libelf@0.8.13%intel@15.0.0
boost@1.55.0%gcc@4.4.7 mpc@1.0.2%gcc@4.4.7-559607f5 boost@1.55.0%gcc@4.4.7 mpc@1.0.2%gcc@4.4.7-559607f5
@ -140,7 +140,7 @@ Spack. For example, this will add the ``mpich`` package built with
$ spack use mpich %gcc@4.4.7 $ spack use mpich %gcc@4.4.7
Prepending: mpich@3.0.4%gcc@4.4.7 (ok) Prepending: mpich@3.0.4%gcc@4.4.7 (ok)
$ which mpicc $ which mpicc
~/src/spack/opt/linux-debian7-x86_64/gcc@4.4.7/mpich@3.0.4/bin/mpicc ~/spack/opt/linux-debian7-x86_64/gcc@4.4.7/mpich@3.0.4/bin/mpicc
Or, similarly with modules, you could type: Or, similarly with modules, you could type:

6
lib/spack/docs/packaging_guide.rst
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@ -3161,11 +3161,11 @@ build it:
$ spack stage libelf $ spack stage libelf
==> Trying to fetch from http://www.mr511.de/software/libelf-0.8.13.tar.gz ==> Trying to fetch from http://www.mr511.de/software/libelf-0.8.13.tar.gz
######################################################################## 100.0% ######################################################################## 100.0%
==> Staging archive: /Users/gamblin2/src/spack/var/spack/stage/libelf@0.8.13%gcc@4.8.3 arch=linux-debian7-x86_64/libelf-0.8.13.tar.gz ==> Staging archive: ~/spack/var/spack/stage/libelf@0.8.13%gcc@4.8.3 arch=linux-debian7-x86_64/libelf-0.8.13.tar.gz
==> Created stage in /Users/gamblin2/src/spack/var/spack/stage/libelf@0.8.13%gcc@4.8.3 arch=linux-debian7-x86_64. ==> Created stage in ~/spack/var/spack/stage/libelf@0.8.13%gcc@4.8.3 arch=linux-debian7-x86_64.
$ spack cd libelf $ spack cd libelf
$ pwd $ pwd
/Users/gamblin2/src/spack/var/spack/stage/libelf@0.8.13%gcc@4.8.3 arch=linux-debian7-x86_64/libelf-0.8.13 ~/spack/var/spack/stage/libelf@0.8.13%gcc@4.8.3 arch=linux-debian7-x86_64/libelf-0.8.13
``spack cd`` here changed the current working directory to the ``spack cd`` here changed the current working directory to the
directory containing the expanded ``libelf`` source code. There are a directory containing the expanded ``libelf`` source code. There are a

22
lib/spack/docs/repositories.rst
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@ -317,8 +317,8 @@ files, use ``spack repo list``.
$ spack repo list $ spack repo list
==> 2 package repositories. ==> 2 package repositories.
myrepo /Users/gamblin2/myrepo myrepo ~/myrepo
builtin /Users/gamblin2/src/spack/var/spack/repos/builtin builtin ~/spack/var/spack/repos/builtin
Each repository is listed with its associated namespace. To get the raw, Each repository is listed with its associated namespace. To get the raw,
merged YAML from all configuration files, use ``spack config get repos``: merged YAML from all configuration files, use ``spack config get repos``:
@ -327,7 +327,7 @@ merged YAML from all configuration files, use ``spack config get repos``:
$ spack config get repos $ spack config get repos
repos:srepos: repos:srepos:
- /Users/gamblin2/myrepo - ~/myrepo
- $spack/var/spack/repos/builtin - $spack/var/spack/repos/builtin
mNote that, unlike ``spack repo list``, this does not include the mNote that, unlike ``spack repo list``, this does not include the
@ -345,7 +345,7 @@ yourself; you can use the ``spack repo create`` command.
$ spack repo create myrepo $ spack repo create myrepo
==> Created repo with namespace 'myrepo'. ==> Created repo with namespace 'myrepo'.
==> To register it with spack, run this command: ==> To register it with spack, run this command:
spack repo add /Users/gamblin2/myrepo spack repo add ~/myrepo
$ ls myrepo $ ls myrepo
packages/ repo.yaml packages/ repo.yaml
@ -362,7 +362,7 @@ You can supply a custom namespace with a second argument, e.g.:
$ spack repo create myrepo llnl.comp $ spack repo create myrepo llnl.comp
==> Created repo with namespace 'llnl.comp'. ==> Created repo with namespace 'llnl.comp'.
==> To register it with spack, run this command: ==> To register it with spack, run this command:
spack repo add /Users/gamblin2/myrepo spack repo add ~/myrepo
$ cat myrepo/repo.yaml $ cat myrepo/repo.yaml
repo: repo:
@ -382,8 +382,8 @@ Once your repository is created, you can register it with Spack with
$ spack repo list $ spack repo list
==> 2 package repositories. ==> 2 package repositories.
llnl.comp /Users/gamblin2/myrepo llnl.comp ~/myrepo
builtin /Users/gamblin2/src/spack/var/spack/repos/builtin builtin ~/spack/var/spack/repos/builtin
This simply adds the repo to your ``repos.yaml`` file. This simply adds the repo to your ``repos.yaml`` file.
@ -405,22 +405,22 @@ By namespace:
.. code-block:: console .. code-block:: console
$ spack repo rm llnl.comp $ spack repo rm llnl.comp
==> Removed repository /Users/gamblin2/myrepo with namespace 'llnl.comp'. ==> Removed repository ~/myrepo with namespace 'llnl.comp'.
$ spack repo list $ spack repo list
==> 1 package repository. ==> 1 package repository.
builtin /Users/gamblin2/src/spack/var/spack/repos/builtin builtin ~/spack/var/spack/repos/builtin
By path: By path:
.. code-block:: console .. code-block:: console
$ spack repo rm ~/myrepo $ spack repo rm ~/myrepo
==> Removed repository /Users/gamblin2/myrepo ==> Removed repository ~/myrepo
$ spack repo list $ spack repo list
==> 1 package repository. ==> 1 package repository.
builtin /Users/gamblin2/src/spack/var/spack/repos/builtin builtin ~/spack/var/spack/repos/builtin
-------------------------------- --------------------------------
Repo namespaces and Python Repo namespaces and Python

116
lib/spack/docs/tutorial_sc16_modules.rst
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@ -77,7 +77,7 @@ Then we can use shell support for modules to add it to the list of known compile
$ module load gcc-6.2.0-gcc-4.8-twd5nqg $ module load gcc-6.2.0-gcc-4.8-twd5nqg
$ spack compiler add $ spack compiler add
==> Added 1 new compiler to /home/mculpo/.spack/linux/compilers.yaml ==> Added 1 new compiler to ~/.spack/linux/compilers.yaml
gcc@6.2.0 gcc@6.2.0
$ spack compilers $ spack compilers
@ -113,7 +113,7 @@ In the end your environment should look something like:
$ module avail $ module avail
------------------------------------------------------------------------ /home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64 ------------------------------------------------------------------------ ------------------------------------------------------------------------ ~/spack/share/spack/modules/linux-Ubuntu14-x86_64 ------------------------------------------------------------------------
binutils-2.27-gcc-4.8-dz3xevw libpciaccess-0.13.4-gcc-6.2.0-eo2siet lzo-2.09-gcc-6.2.0-jcngz72 netlib-scalapack-2.0.2-gcc-6.2.0-wnimqhw python-2.7.12-gcc-6.2.0-qu7rc5p binutils-2.27-gcc-4.8-dz3xevw libpciaccess-0.13.4-gcc-6.2.0-eo2siet lzo-2.09-gcc-6.2.0-jcngz72 netlib-scalapack-2.0.2-gcc-6.2.0-wnimqhw python-2.7.12-gcc-6.2.0-qu7rc5p
bzip2-1.0.6-gcc-6.2.0-csoc2mq libsigsegv-2.10-gcc-4.8-avb6azw m4-1.4.17-gcc-4.8-iggewke netlib-scalapack-2.0.2-gcc-6.2.0-wojunhq sqlite-3.8.5-gcc-6.2.0-td3zfe7 bzip2-1.0.6-gcc-6.2.0-csoc2mq libsigsegv-2.10-gcc-4.8-avb6azw m4-1.4.17-gcc-4.8-iggewke netlib-scalapack-2.0.2-gcc-6.2.0-wojunhq sqlite-3.8.5-gcc-6.2.0-td3zfe7
cmake-3.5.2-gcc-6.2.0-6poypqg libsigsegv-2.10-gcc-6.2.0-g3qpmbi m4-1.4.17-gcc-6.2.0-lhgqa6s nettle-3.2-gcc-6.2.0-djdthlh tcl-8.6.5-gcc-4.8-atddxu7 cmake-3.5.2-gcc-6.2.0-6poypqg libsigsegv-2.10-gcc-6.2.0-g3qpmbi m4-1.4.17-gcc-6.2.0-lhgqa6s nettle-3.2-gcc-6.2.0-djdthlh tcl-8.6.5-gcc-4.8-atddxu7
@ -139,16 +139,16 @@ look at the ``gcc`` module you'll see something like:
$ module show gcc-6.2.0-gcc-4.8-twd5nqg $ module show gcc-6.2.0-gcc-4.8-twd5nqg
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
/home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64/gcc-6.2.0-gcc-4.8-twd5nqg: ~/spack/share/spack/modules/linux-Ubuntu14-x86_64/gcc-6.2.0-gcc-4.8-twd5nqg:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
whatis("gcc @6.2.0 ") whatis("gcc @6.2.0 ")
prepend_path("PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/bin") prepend_path("PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/bin")
prepend_path("CMAKE_PREFIX_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/") prepend_path("CMAKE_PREFIX_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/")
prepend_path("MANPATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/share/man") prepend_path("MANPATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/share/man")
prepend_path("PKG_CONFIG_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64/pkgconfig") prepend_path("PKG_CONFIG_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64/pkgconfig")
prepend_path("LIBRARY_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64") prepend_path("LIBRARY_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64")
prepend_path("LD_LIBRARY_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64") prepend_path("LD_LIBRARY_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64")
prepend_path("CPATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/include") prepend_path("CPATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/include")
help([[The GNU Compiler Collection includes front ends for C, C++, Objective-C, help([[The GNU Compiler Collection includes front ends for C, C++, Objective-C,
Fortran, and Java. Fortran, and Java.
]]) ]])
@ -193,14 +193,14 @@ paths have disappeared:
$ module show gcc-6.2.0-gcc-4.8-twd5nqg $ module show gcc-6.2.0-gcc-4.8-twd5nqg
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
/home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64/gcc-6.2.0-gcc-4.8-twd5nqg: ~/spack/share/spack/modules/linux-Ubuntu14-x86_64/gcc-6.2.0-gcc-4.8-twd5nqg:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
whatis("gcc @6.2.0 ") whatis("gcc @6.2.0 ")
prepend_path("PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/bin") prepend_path("PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/bin")
prepend_path("CMAKE_PREFIX_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/") prepend_path("CMAKE_PREFIX_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/")
prepend_path("MANPATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/share/man") prepend_path("MANPATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/share/man")
prepend_path("PKG_CONFIG_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64/pkgconfig") prepend_path("PKG_CONFIG_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64/pkgconfig")
prepend_path("LD_LIBRARY_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64") prepend_path("LD_LIBRARY_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64")
help([[The GNU Compiler Collection includes front ends for C, C++, Objective-C, help([[The GNU Compiler Collection includes front ends for C, C++, Objective-C,
Fortran, and Java. Fortran, and Java.
]]) ]])
@ -251,7 +251,7 @@ and regenerate the module files:
$ module avail $ module avail
------------------------------------------------------------------------ /home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64 ------------------------------------------------------------------------ ------------------------------------------------------------------------ ~/spack/share/spack/modules/linux-Ubuntu14-x86_64 ------------------------------------------------------------------------
bzip2-1.0.6-gcc-6.2.0-csoc2mq libsigsegv-2.10-gcc-6.2.0-g3qpmbi ncurses-6.0-gcc-6.2.0-7tb426s openmpi-2.0.1-gcc-6.2.0-s3qbtby sqlite-3.8.5-gcc-6.2.0-td3zfe7 bzip2-1.0.6-gcc-6.2.0-csoc2mq libsigsegv-2.10-gcc-6.2.0-g3qpmbi ncurses-6.0-gcc-6.2.0-7tb426s openmpi-2.0.1-gcc-6.2.0-s3qbtby sqlite-3.8.5-gcc-6.2.0-td3zfe7
cmake-3.5.2-gcc-6.2.0-6poypqg libtool-2.4.6-gcc-6.2.0-kiepac6 netlib-lapack-3.6.1-gcc-6.2.0-mirer2l openssl-1.0.2j-gcc-6.2.0-hibnfda util-macros-1.19.0-gcc-6.2.0-uoukuqk cmake-3.5.2-gcc-6.2.0-6poypqg libtool-2.4.6-gcc-6.2.0-kiepac6 netlib-lapack-3.6.1-gcc-6.2.0-mirer2l openssl-1.0.2j-gcc-6.2.0-hibnfda util-macros-1.19.0-gcc-6.2.0-uoukuqk
curl-7.50.3-gcc-6.2.0-2ffacqm libxml2-2.9.4-gcc-6.2.0-3k4ykbe netlib-scalapack-2.0.2-gcc-6.2.0-6bqlxqy pkg-config-0.29.1-gcc-6.2.0-rslsgcs xz-5.2.2-gcc-6.2.0-t5lk6in curl-7.50.3-gcc-6.2.0-2ffacqm libxml2-2.9.4-gcc-6.2.0-3k4ykbe netlib-scalapack-2.0.2-gcc-6.2.0-6bqlxqy pkg-config-0.29.1-gcc-6.2.0-rslsgcs xz-5.2.2-gcc-6.2.0-t5lk6in
@ -294,7 +294,7 @@ you'll see that now the module for ``gcc@6.2.0`` has reappeared:
$ module avail gcc-6.2.0-gcc-4.8-twd5nqg $ module avail gcc-6.2.0-gcc-4.8-twd5nqg
------------------------------------------------------------------------ /home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64 ------------------------------------------------------------------------ ------------------------------------------------------------------------ ~/spack/share/spack/modules/linux-Ubuntu14-x86_64 ------------------------------------------------------------------------
gcc-6.2.0-gcc-4.8-twd5nqg gcc-6.2.0-gcc-4.8-twd5nqg
------------------------- -------------------------
@ -329,7 +329,7 @@ If you try to regenerate the module files now you will get an error:
$ spack module refresh --module-type tcl --delete-tree -y $ spack module refresh --module-type tcl --delete-tree -y
==> Error: Name clashes detected in module files: ==> Error: Name clashes detected in module files:
file : /home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64/netlib-scalapack-2.0.2-gcc-6.2.0 file : ~/spack/share/spack/modules/linux-Ubuntu14-x86_64/netlib-scalapack-2.0.2-gcc-6.2.0
spec : netlib-scalapack@2.0.2%gcc@6.2.0~fpic+shared arch=linux-Ubuntu14-x86_64 spec : netlib-scalapack@2.0.2%gcc@6.2.0~fpic+shared arch=linux-Ubuntu14-x86_64
spec : netlib-scalapack@2.0.2%gcc@6.2.0~fpic+shared arch=linux-Ubuntu14-x86_64 spec : netlib-scalapack@2.0.2%gcc@6.2.0~fpic+shared arch=linux-Ubuntu14-x86_64
spec : netlib-scalapack@2.0.2%gcc@6.2.0~fpic+shared arch=linux-Ubuntu14-x86_64 spec : netlib-scalapack@2.0.2%gcc@6.2.0~fpic+shared arch=linux-Ubuntu14-x86_64
@ -377,7 +377,7 @@ Regenerating module files now we obtain:
==> Regenerating tcl module files ==> Regenerating tcl module files
$ module avail $ module avail
------------------------------------------------------------------------ /home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64 ------------------------------------------------------------------------ ------------------------------------------------------------------------ ~/spack/share/spack/modules/linux-Ubuntu14-x86_64 ------------------------------------------------------------------------
bzip2-1.0.6-gcc-6.2.0 libpciaccess-0.13.4-gcc-6.2.0 mpich-3.2-gcc-6.2.0 openblas-0.2.19-gcc-6.2.0 python-2.7.12-gcc-6.2.0 bzip2-1.0.6-gcc-6.2.0 libpciaccess-0.13.4-gcc-6.2.0 mpich-3.2-gcc-6.2.0 openblas-0.2.19-gcc-6.2.0 python-2.7.12-gcc-6.2.0
cmake-3.5.2-gcc-6.2.0 libsigsegv-2.10-gcc-6.2.0 ncurses-6.0-gcc-6.2.0 openmpi-2.0.1-gcc-6.2.0 sqlite-3.8.5-gcc-6.2.0 cmake-3.5.2-gcc-6.2.0 libsigsegv-2.10-gcc-6.2.0 ncurses-6.0-gcc-6.2.0 openmpi-2.0.1-gcc-6.2.0 sqlite-3.8.5-gcc-6.2.0
curl-7.50.3-gcc-6.2.0 libtool-2.4.6-gcc-6.2.0 netlib-lapack-3.6.1-gcc-6.2.0 openssl-1.0.2j-gcc-6.2.0 util-macros-1.19.0-gcc-6.2.0 curl-7.50.3-gcc-6.2.0 libtool-2.4.6-gcc-6.2.0 netlib-lapack-3.6.1-gcc-6.2.0 openssl-1.0.2j-gcc-6.2.0 util-macros-1.19.0-gcc-6.2.0
@ -420,7 +420,7 @@ The final result should look like:
$ module avail $ module avail
------------------------------------------------------------------------ /home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64 ------------------------------------------------------------------------ ------------------------------------------------------------------------ ~/spack/share/spack/modules/linux-Ubuntu14-x86_64 ------------------------------------------------------------------------
bzip2/1.0.6-gcc-6.2.0 libpciaccess/0.13.4-gcc-6.2.0 mpich/3.2-gcc-6.2.0 openblas/0.2.19-gcc-6.2.0 python/2.7.12-gcc-6.2.0 bzip2/1.0.6-gcc-6.2.0 libpciaccess/0.13.4-gcc-6.2.0 mpich/3.2-gcc-6.2.0 openblas/0.2.19-gcc-6.2.0 python/2.7.12-gcc-6.2.0
cmake/3.5.2-gcc-6.2.0 libsigsegv/2.10-gcc-6.2.0 ncurses/6.0-gcc-6.2.0 openmpi/2.0.1-gcc-6.2.0 sqlite/3.8.5-gcc-6.2.0 cmake/3.5.2-gcc-6.2.0 libsigsegv/2.10-gcc-6.2.0 ncurses/6.0-gcc-6.2.0 openmpi/2.0.1-gcc-6.2.0 sqlite/3.8.5-gcc-6.2.0
curl/7.50.3-gcc-6.2.0 libtool/2.4.6-gcc-6.2.0 netlib-lapack/3.6.1-gcc-6.2.0 openssl/1.0.2j-gcc-6.2.0 util-macros/1.19.0-gcc-6.2.0 curl/7.50.3-gcc-6.2.0 libtool/2.4.6-gcc-6.2.0 netlib-lapack/3.6.1-gcc-6.2.0 openssl/1.0.2j-gcc-6.2.0 util-macros/1.19.0-gcc-6.2.0
@ -486,15 +486,15 @@ Regenerating the module files should result in something like:
$ module show gcc $ module show gcc
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
/home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64/gcc/6.2.0-gcc-4.8: ~/spack/share/spack/modules/linux-Ubuntu14-x86_64/gcc/6.2.0-gcc-4.8:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
whatis("gcc @6.2.0 ") whatis("gcc @6.2.0 ")
prepend_path("PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/bin") prepend_path("PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/bin")
prepend_path("CMAKE_PREFIX_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/") prepend_path("CMAKE_PREFIX_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/")
prepend_path("MANPATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/share/man") prepend_path("MANPATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/share/man")
prepend_path("PKG_CONFIG_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64/pkgconfig") prepend_path("PKG_CONFIG_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64/pkgconfig")
prepend_path("LD_LIBRARY_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64") prepend_path("LD_LIBRARY_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64")
setenv("GCC_ROOT","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u") setenv("GCC_ROOT","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u")
conflict("gcc") conflict("gcc")
help([[The GNU Compiler Collection includes front ends for C, C++, Objective-C, help([[The GNU Compiler Collection includes front ends for C, C++, Objective-C,
Fortran, and Java. Fortran, and Java.
@ -560,15 +560,15 @@ This time we will be more selective and regenerate only the ``gcc`` and
$ module show gcc $ module show gcc
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
/home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64/gcc/6.2.0-gcc-4.8: ~/spack/share/spack/modules/linux-Ubuntu14-x86_64/gcc/6.2.0-gcc-4.8:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
whatis("gcc @6.2.0 ") whatis("gcc @6.2.0 ")
prepend_path("PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/bin") prepend_path("PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/bin")
prepend_path("CMAKE_PREFIX_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/") prepend_path("CMAKE_PREFIX_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/")
prepend_path("MANPATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/share/man") prepend_path("MANPATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/share/man")
prepend_path("PKG_CONFIG_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64/pkgconfig") prepend_path("PKG_CONFIG_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64/pkgconfig")
prepend_path("LD_LIBRARY_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64") prepend_path("LD_LIBRARY_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u/lib64")
setenv("GCC_ROOT","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u") setenv("GCC_ROOT","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-4.8/gcc-6.2.0-twd5nqg33hrrssqclcfi5k42eccwxz5u")
setenv("CC","gcc") setenv("CC","gcc")
setenv("CXX","g++") setenv("CXX","g++")
setenv("F90","gfortran") setenv("F90","gfortran")
@ -581,17 +581,17 @@ This time we will be more selective and regenerate only the ``gcc`` and
$ module show openmpi $ module show openmpi
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
/home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64/openmpi/2.0.1-gcc-6.2.0: ~/spack/share/spack/modules/linux-Ubuntu14-x86_64/openmpi/2.0.1-gcc-6.2.0:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
whatis("openmpi @2.0.1 ") whatis("openmpi @2.0.1 ")
prepend_path("PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w/bin") prepend_path("PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w/bin")
prepend_path("CMAKE_PREFIX_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w/") prepend_path("CMAKE_PREFIX_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w/")
prepend_path("LD_LIBRARY_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w/lib") prepend_path("LD_LIBRARY_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w/lib")
prepend_path("PKG_CONFIG_PATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w/lib/pkgconfig") prepend_path("PKG_CONFIG_PATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w/lib/pkgconfig")
prepend_path("MANPATH","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w/share/man") prepend_path("MANPATH","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w/share/man")
setenv("SLURM_MPI_TYPE","pmi2") setenv("SLURM_MPI_TYPE","pmi2")
setenv("OMPI_MCA_BTL_OPENIB_WARN_DEFAULT_GID_PREFIX","0") setenv("OMPI_MCA_BTL_OPENIB_WARN_DEFAULT_GID_PREFIX","0")
setenv("OPENMPI_ROOT","/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w") setenv("OPENMPI_ROOT","~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/openmpi-2.0.1-s3qbtbyh3y5y4gkchmhcuak7th44l53w")
conflict("openmpi") conflict("openmpi")
help([[The Open MPI Project is an open source Message Passing Interface help([[The Open MPI Project is an open source Message Passing Interface
implementation that is developed and maintained by a consortium of implementation that is developed and maintained by a consortium of
@ -693,10 +693,10 @@ Now the ``py-scipy`` module will be:
module load py-numpy/1.11.1-gcc-6.2.0-openblas module load py-numpy/1.11.1-gcc-6.2.0-openblas
} }
prepend-path CMAKE_PREFIX_PATH "/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/py-scipy-0.18.1-e6uljfiffgym4xvj6wveevqxfqnfb3gh/" prepend-path CMAKE_PREFIX_PATH "~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/py-scipy-0.18.1-e6uljfiffgym4xvj6wveevqxfqnfb3gh/"
prepend-path LD_LIBRARY_PATH "/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/py-scipy-0.18.1-e6uljfiffgym4xvj6wveevqxfqnfb3gh/lib" prepend-path LD_LIBRARY_PATH "~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/py-scipy-0.18.1-e6uljfiffgym4xvj6wveevqxfqnfb3gh/lib"
prepend-path PYTHONPATH "/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/py-scipy-0.18.1-e6uljfiffgym4xvj6wveevqxfqnfb3gh/lib/python2.7/site-packages" prepend-path PYTHONPATH "~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/py-scipy-0.18.1-e6uljfiffgym4xvj6wveevqxfqnfb3gh/lib/python2.7/site-packages"
setenv PY_SCIPY_ROOT "/home/mculpo/wdir/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/py-scipy-0.18.1-e6uljfiffgym4xvj6wveevqxfqnfb3gh" setenv PY_SCIPY_ROOT "~/spack/opt/spack/linux-Ubuntu14-x86_64/gcc-6.2.0/py-scipy-0.18.1-e6uljfiffgym4xvj6wveevqxfqnfb3gh"
conflict py-scipy conflict py-scipy
and will contain code to autoload all the dependencies: and will contain code to autoload all the dependencies:
@ -800,11 +800,11 @@ list the available modules, you'll see:
.. code-block:: console .. code-block:: console
$ module unuse /home/mculpo/wdir/spack/share/spack/modules/linux-Ubuntu14-x86_64 $ module unuse ~/spack/share/spack/modules/linux-Ubuntu14-x86_64
$ module use /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/Core $ module use ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/Core
$ module avail $ module avail
----------------------------------------------------------------------- /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/Core ----------------------------------------------------------------------- ----------------------------------------------------------------------- ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/Core -----------------------------------------------------------------------
gcc/6.2.0 gcc/6.2.0
The only module visible now is ``gcc``. Loading that you will make The only module visible now is ``gcc``. Loading that you will make
@ -815,13 +815,13 @@ visible the ``Compiler`` part of the software stack that was built with ``gcc/6.
$ module load gcc $ module load gcc
$ module avail $ module avail
-------------------------------------------------------------------- /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/gcc/6.2.0 --------------------------------------------------------------------- -------------------------------------------------------------------- ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/gcc/6.2.0 ---------------------------------------------------------------------
binutils/2.27 curl/7.50.3 hwloc/1.11.4 libtool/2.4.6 lzo/2.09 netlib-lapack/3.6.1 openssl/1.0.2j py-scipy/0.18.1-openblas util-macros/1.19.0 binutils/2.27 curl/7.50.3 hwloc/1.11.4 libtool/2.4.6 lzo/2.09 netlib-lapack/3.6.1 openssl/1.0.2j py-scipy/0.18.1-openblas util-macros/1.19.0
bison/3.0.4 expat/2.2.0 libarchive/3.2.1 libxml2/2.9.4 m4/1.4.17 nettle/3.2 pkg-config/0.29.1 py-setuptools/25.2.0 xz/5.2.2 bison/3.0.4 expat/2.2.0 libarchive/3.2.1 libxml2/2.9.4 m4/1.4.17 nettle/3.2 pkg-config/0.29.1 py-setuptools/25.2.0 xz/5.2.2
bzip2/1.0.6 flex/2.6.0 libpciaccess/0.13.4 lz4/131 mpich/3.2 openblas/0.2.19 py-nose/1.3.7 python/2.7.12 zlib/1.2.8 bzip2/1.0.6 flex/2.6.0 libpciaccess/0.13.4 lz4/131 mpich/3.2 openblas/0.2.19 py-nose/1.3.7 python/2.7.12 zlib/1.2.8
cmake/3.6.1 gmp/6.1.1 libsigsegv/2.10 lzma/4.32.7 ncurses/6.0 openmpi/2.0.1 py-numpy/1.11.1-openblas sqlite/3.8.5 cmake/3.6.1 gmp/6.1.1 libsigsegv/2.10 lzma/4.32.7 ncurses/6.0 openmpi/2.0.1 py-numpy/1.11.1-openblas sqlite/3.8.5
----------------------------------------------------------------------- /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/Core ----------------------------------------------------------------------- ----------------------------------------------------------------------- ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/Core -----------------------------------------------------------------------
gcc/6.2.0 (L) gcc/6.2.0 (L)
The same holds true for the ``MPI`` part of the stack, that you can enable by loading The same holds true for the ``MPI`` part of the stack, that you can enable by loading
@ -833,16 +833,16 @@ once you'll try switching among different stacks:
$ module load mpich $ module load mpich
$ module avail $ module avail
----------------------------------------------------------- /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/mpich/3.2-5n5xoep/gcc/6.2.0 ------------------------------------------------------------ ----------------------------------------------------------- ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/mpich/3.2-5n5xoep/gcc/6.2.0 ------------------------------------------------------------
netlib-scalapack/2.0.2-netlib netlib-scalapack/2.0.2-openblas (D) netlib-scalapack/2.0.2-netlib netlib-scalapack/2.0.2-openblas (D)
-------------------------------------------------------------------- /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/gcc/6.2.0 --------------------------------------------------------------------- -------------------------------------------------------------------- ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/gcc/6.2.0 ---------------------------------------------------------------------
binutils/2.27 curl/7.50.3 hwloc/1.11.4 libtool/2.4.6 lzo/2.09 netlib-lapack/3.6.1 openssl/1.0.2j py-scipy/0.18.1-openblas util-macros/1.19.0 binutils/2.27 curl/7.50.3 hwloc/1.11.4 libtool/2.4.6 lzo/2.09 netlib-lapack/3.6.1 openssl/1.0.2j py-scipy/0.18.1-openblas util-macros/1.19.0
bison/3.0.4 expat/2.2.0 libarchive/3.2.1 libxml2/2.9.4 m4/1.4.17 nettle/3.2 pkg-config/0.29.1 py-setuptools/25.2.0 xz/5.2.2 bison/3.0.4 expat/2.2.0 libarchive/3.2.1 libxml2/2.9.4 m4/1.4.17 nettle/3.2 pkg-config/0.29.1 py-setuptools/25.2.0 xz/5.2.2
bzip2/1.0.6 flex/2.6.0 libpciaccess/0.13.4 lz4/131 mpich/3.2 (L) openblas/0.2.19 py-nose/1.3.7 python/2.7.12 zlib/1.2.8 bzip2/1.0.6 flex/2.6.0 libpciaccess/0.13.4 lz4/131 mpich/3.2 (L) openblas/0.2.19 py-nose/1.3.7 python/2.7.12 zlib/1.2.8
cmake/3.6.1 gmp/6.1.1 libsigsegv/2.10 lzma/4.32.7 ncurses/6.0 openmpi/2.0.1 py-numpy/1.11.1-openblas sqlite/3.8.5 cmake/3.6.1 gmp/6.1.1 libsigsegv/2.10 lzma/4.32.7 ncurses/6.0 openmpi/2.0.1 py-numpy/1.11.1-openblas sqlite/3.8.5
----------------------------------------------------------------------- /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/Core ----------------------------------------------------------------------- ----------------------------------------------------------------------- ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/Core -----------------------------------------------------------------------
gcc/6.2.0 (L) gcc/6.2.0 (L)
$ module load openblas netlib-scalapack/2.0.2-openblas $ module load openblas netlib-scalapack/2.0.2-openblas
@ -937,19 +937,19 @@ you will have something like:
$ module load openmpi $ module load openmpi
$ module avail $ module avail
--------------------------------------------- /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/openblas/0.2.19-js33umc/openmpi/2.0.1-s3qbtby/gcc/6.2.0 ---------------------------------------------- --------------------------------------------- ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/openblas/0.2.19-js33umc/openmpi/2.0.1-s3qbtby/gcc/6.2.0 ----------------------------------------------
netlib-scalapack/2.0.2 netlib-scalapack/2.0.2
-------------------------------------------------------- /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/openblas/0.2.19-js33umc/gcc/6.2.0 --------------------------------------------------------- -------------------------------------------------------- ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/openblas/0.2.19-js33umc/gcc/6.2.0 ---------------------------------------------------------
py-numpy/1.11.1 py-scipy/0.18.1 py-numpy/1.11.1 py-scipy/0.18.1
-------------------------------------------------------------------- /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/gcc/6.2.0 --------------------------------------------------------------------- -------------------------------------------------------------------- ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/gcc/6.2.0 ---------------------------------------------------------------------
binutils/2.27 curl/7.50.3 hwloc/1.11.4 libtool/2.4.6 lzo/2.09 netlib-lapack/3.6.1 openssl/1.0.2j python/2.7.12 zlib/1.2.8 binutils/2.27 curl/7.50.3 hwloc/1.11.4 libtool/2.4.6 lzo/2.09 netlib-lapack/3.6.1 openssl/1.0.2j python/2.7.12 zlib/1.2.8
bison/3.0.4 expat/2.2.0 libarchive/3.2.1 libxml2/2.9.4 m4/1.4.17 nettle/3.2 pkg-config/0.29.1 sqlite/3.8.5 bison/3.0.4 expat/2.2.0 libarchive/3.2.1 libxml2/2.9.4 m4/1.4.17 nettle/3.2 pkg-config/0.29.1 sqlite/3.8.5
bzip2/1.0.6 flex/2.6.0 libpciaccess/0.13.4 lz4/131 mpich/3.2 openblas/0.2.19 (L) py-nose/1.3.7 util-macros/1.19.0 bzip2/1.0.6 flex/2.6.0 libpciaccess/0.13.4 lz4/131 mpich/3.2 openblas/0.2.19 (L) py-nose/1.3.7 util-macros/1.19.0
cmake/3.6.1 gmp/6.1.1 libsigsegv/2.10 lzma/4.32.7 ncurses/6.0 openmpi/2.0.1 (L) py-setuptools/25.2.0 xz/5.2.2 cmake/3.6.1 gmp/6.1.1 libsigsegv/2.10 lzma/4.32.7 ncurses/6.0 openmpi/2.0.1 (L) py-setuptools/25.2.0 xz/5.2.2
----------------------------------------------------------------------- /home/mculpo/wdir/spack/share/spack/lmod/linux-Ubuntu14-x86_64/Core ----------------------------------------------------------------------- ----------------------------------------------------------------------- ~/spack/share/spack/lmod/linux-Ubuntu14-x86_64/Core -----------------------------------------------------------------------
gcc/6.2.0 (L) gcc/6.2.0 (L)
Now both the ``MPI`` and the ``LAPACK`` providers are handled by LMod as hierarchies: Now both the ``MPI`` and the ``LAPACK`` providers are handled by LMod as hierarchies:

396
lib/spack/docs/tutorial_sc16_spack_basics.rst
View File

@ -26,20 +26,20 @@ Spack works out of the box. Simply clone spack and get going.
.. code-block:: console .. code-block:: console
becker33:~$ git clone https://github.com/LLNL/spack.git $ git clone https://github.com/LLNL/spack.git
Initialized empty Git repository in /g/g0/becker33/testclone/spack/.git/ Initialized empty Git repository in ~/spack/.git/
remote: Counting objects: 47125, done. remote: Counting objects: 47125, done.
remote: Compressing objects: 100% (68/68), done. remote: Compressing objects: 100% (68/68), done.
remote: Total 47125 (delta 16), reused 2 (delta 2), pack-reused 47047 remote: Total 47125 (delta 16), reused 2 (delta 2), pack-reused 47047
Receiving objects: 100% (47125/47125), 12.02 MiB | 2.11 MiB/s, done. Receiving objects: 100% (47125/47125), 12.02 MiB | 2.11 MiB/s, done.
Resolving deltas: 100% (23044/23044), done. Resolving deltas: 100% (23044/23044), done.
becker33:~$ cd spack $ cd spack
Then add Spack to your path. Then add Spack to your path.
.. code-block:: console .. code-block:: console
becker33:spack$ export PATH=~/spack/bin/spack:$PATH $ export PATH=~/spack/bin:$PATH
You're good to go! You're good to go!
@ -51,7 +51,7 @@ The ``spack list`` command shows available packages.
.. code-block:: console .. code-block:: console
becker33:spack$ spack list $ spack list
==> 1016 packages. ==> 1016 packages.
abinit hwloc piranha r-rjava abinit hwloc piranha r-rjava
ack hydra pixman r-rjson ack hydra pixman r-rjson
@ -64,7 +64,7 @@ we can view all available python packages.
.. code-block:: console .. code-block:: console
becker33:spack$ spack list py $ spack list py
==> 129 packages. ==> 129 packages.
py-3to2 py-epydoc py-nestle py-pycparser py-six py-3to2 py-epydoc py-nestle py-pycparser py-six
py-alabaster py-flake8 py-netcdf py-pydatalog py-sncosmo py-alabaster py-flake8 py-netcdf py-pydatalog py-sncosmo
@ -82,19 +82,19 @@ software, simply type ``spack install <package_name>``
$ spack install libelf $ spack install libelf
==> Installing libelf ==> Installing libelf
==> Trying to fetch from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libelf/libelf-0.8.13.tar.gz ==> Trying to fetch from ~/spack/var/spack/cache/libelf/libelf-0.8.13.tar.gz
curl: (37) Couldn't open file /g/g0/becker33/SC16-spack/spack/var/spack/cache/libelf/libelf-0.8.13.tar.gz curl: (37) Couldn't open file ~/spack/var/spack/cache/libelf/libelf-0.8.13.tar.gz
==> Fetching from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libelf/libelf-0.8.13.tar.gz failed. ==> Fetching from ~/spack/var/spack/cache/libelf/libelf-0.8.13.tar.gz failed.
==> Trying to fetch from http://www.mr511.de/software/libelf-0.8.13.tar.gz ==> Trying to fetch from http://www.mr511.de/software/libelf-0.8.13.tar.gz
################################################################################################################################################################################# 100.0% ################################################################################################################################################################################# 100.0%
==> Staging archive: /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.13-csrt4qxfkhjgn5xg3zjpkir7xdnszl2a/libelf-0.8.13.tar.gz ==> Staging archive: ~/spack/var/spack/stage/libelf-0.8.13-csrt4qxfkhjgn5xg3zjpkir7xdnszl2a/libelf-0.8.13.tar.gz
==> Created stage in /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.13-csrt4qxfkhjgn5xg3zjpkir7xdnszl2a ==> Created stage in ~/spack/var/spack/stage/libelf-0.8.13-csrt4qxfkhjgn5xg3zjpkir7xdnszl2a
==> No patches needed for libelf ==> No patches needed for libelf
==> Building libelf [Package] ==> Building libelf [Package]
==> Executing phase : 'install' ==> Executing phase : 'install'
==> Successfully installed libelf ==> Successfully installed libelf
Fetch: 1.21s. Build: 8.42s. Total: 9.62s. Fetch: 1.21s. Build: 8.42s. Total: 9.62s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.13-csrt4qxfkhjgn5xg3zjpkir7xdnszl2a [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.13-csrt4qxfkhjgn5xg3zjpkir7xdnszl2a
Spack's spec syntax is the interface by which we can request specific Spack's spec syntax is the interface by which we can request specific
@ -105,16 +105,16 @@ compilers.
$ spack install libelf %intel $ spack install libelf %intel
==> Installing libelf ==> Installing libelf
==> Trying to fetch from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libelf/libelf-0.8.13.tar.gz ==> Trying to fetch from ~/spack/var/spack/cache/libelf/libelf-0.8.13.tar.gz
################################################################################################################################################################################# 100.0% ################################################################################################################################################################################# 100.0%
==> Staging archive: /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.13-7wgp32xksatkvw2tbssmehw2t5tnxndj/libelf-0.8.13.tar.gz ==> Staging archive: ~/spack/var/spack/stage/libelf-0.8.13-7wgp32xksatkvw2tbssmehw2t5tnxndj/libelf-0.8.13.tar.gz
==> Created stage in /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.13-7wgp32xksatkvw2tbssmehw2t5tnxndj ==> Created stage in ~/spack/var/spack/stage/libelf-0.8.13-7wgp32xksatkvw2tbssmehw2t5tnxndj
==> No patches needed for libelf ==> No patches needed for libelf
==> Building libelf [Package] ==> Building libelf [Package]
==> Executing phase : 'install' ==> Executing phase : 'install'
==> Successfully installed libelf ==> Successfully installed libelf
Fetch: 0.09s. Build: 50.64s. Total: 50.72s. Fetch: 0.09s. Build: 50.64s. Total: 50.72s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/intel-16.0.3/libelf-0.8.13-7wgp32xksatkvw2tbssmehw2t5tnxndj [+] ~/spack/opt/spack/linux-redhat6-x86_64/intel-16.0.3/libelf-0.8.13-7wgp32xksatkvw2tbssmehw2t5tnxndj
Note that this installation is located separately from the previous Note that this installation is located separately from the previous
one. We will discuss this in more detail later, but this is part of what one. We will discuss this in more detail later, but this is part of what
@ -154,34 +154,34 @@ compilers.
$ spack install libelf @0.8.12 $ spack install libelf @0.8.12
==> Installing libelf ==> Installing libelf
==> Trying to fetch from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libelf/libelf-0.8.12.tar.gz ==> Trying to fetch from ~/spack/var/spack/cache/libelf/libelf-0.8.12.tar.gz
curl: (37) Couldn't open file /g/g0/becker33/SC16-spack/spack/var/spack/cache/libelf/libelf-0.8.12.tar.gz curl: (37) Couldn't open file ~/spack/var/spack/cache/libelf/libelf-0.8.12.tar.gz
==> Fetching from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libelf/libelf-0.8.12.tar.gz failed. ==> Fetching from ~/spack/var/spack/cache/libelf/libelf-0.8.12.tar.gz failed.
==> Trying to fetch from http://www.mr511.de/software/libelf-0.8.12.tar.gz ==> Trying to fetch from http://www.mr511.de/software/libelf-0.8.12.tar.gz
################################################################################################################################################################################# 100.0% ################################################################################################################################################################################# 100.0%
==> Staging archive: /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.12-ipggckv6i7h44iryzfa4dwdela32a7fy/libelf-0.8.12.tar.gz ==> Staging archive: ~/spack/var/spack/stage/libelf-0.8.12-ipggckv6i7h44iryzfa4dwdela32a7fy/libelf-0.8.12.tar.gz
==> Created stage in /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.12-ipggckv6i7h44iryzfa4dwdela32a7fy ==> Created stage in ~/spack/var/spack/stage/libelf-0.8.12-ipggckv6i7h44iryzfa4dwdela32a7fy
==> No patches needed for libelf ==> No patches needed for libelf
==> Building libelf [Package] ==> Building libelf [Package]
==> Executing phase : 'install' ==> Executing phase : 'install'
==> Successfully installed libelf ==> Successfully installed libelf
Fetch: 1.12s. Build: 7.88s. Total: 9.00s. Fetch: 1.12s. Build: 7.88s. Total: 9.00s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.12-ipggckv6i7h44iryzfa4dwdela32a7fy [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.12-ipggckv6i7h44iryzfa4dwdela32a7fy
$ spack install libelf %intel@15.0.4 $ spack install libelf %intel@15.0.4
==> Installing libelf ==> Installing libelf
==> Trying to fetch from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libelf/libelf-0.8.13.tar.gz ==> Trying to fetch from ~/spack/var/spack/cache/libelf/libelf-0.8.13.tar.gz
################################################################################################################################################################################# 100.0% ################################################################################################################################################################################# 100.0%
==> Staging archive: /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.13-w33hrejdyqu2j2gggdswitls2zv6kdsi/libelf-0.8.13.tar.gz ==> Staging archive: ~/spack/var/spack/stage/libelf-0.8.13-w33hrejdyqu2j2gggdswitls2zv6kdsi/libelf-0.8.13.tar.gz
==> Created stage in /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.13-w33hrejdyqu2j2gggdswitls2zv6kdsi ==> Created stage in ~/spack/var/spack/stage/libelf-0.8.13-w33hrejdyqu2j2gggdswitls2zv6kdsi
==> No patches needed for libelf ==> No patches needed for libelf
==> Building libelf [Package] ==> Building libelf [Package]
==> Executing phase : 'install' ==> Executing phase : 'install'
==> Successfully installed libelf ==> Successfully installed libelf
Fetch: 0.09s. Build: 55.51s. Total: 55.60s. Fetch: 0.09s. Build: 55.51s. Total: 55.60s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/intel-15.0.4/libelf-0.8.13-w33hrejdyqu2j2gggdswitls2zv6kdsi [+] ~/spack/opt/spack/linux-redhat6-x86_64/intel-15.0.4/libelf-0.8.13-w33hrejdyqu2j2gggdswitls2zv6kdsi
The spec syntax also includes compiler flags. Spack accepts ``cppflags``, The spec syntax also includes compiler flags. Spack accepts ``cppflags``,
@ -194,16 +194,16 @@ automatically by the Spack compiler wrappers.
$ spack install libelf @0.8.12 cppflags=\"-O3\" $ spack install libelf @0.8.12 cppflags=\"-O3\"
==> Installing libelf ==> Installing libelf
==> Trying to fetch from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libelf/libelf-0.8.12.tar.gz ==> Trying to fetch from ~/spack/var/spack/cache/libelf/libelf-0.8.12.tar.gz
################################################################################################################################################################################# 100.0% ################################################################################################################################################################################# 100.0%
==> Staging archive: /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.12-vrv2ttbd34xlfoxy4jwt6qsjrcbalmmw/libelf-0.8.12.tar.gz ==> Staging archive: ~/spack/var/spack/stage/libelf-0.8.12-vrv2ttbd34xlfoxy4jwt6qsjrcbalmmw/libelf-0.8.12.tar.gz
==> Created stage in /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.12-vrv2ttbd34xlfoxy4jwt6qsjrcbalmmw ==> Created stage in ~/spack/var/spack/stage/libelf-0.8.12-vrv2ttbd34xlfoxy4jwt6qsjrcbalmmw
==> No patches needed for libelf ==> No patches needed for libelf
==> Building libelf [Package] ==> Building libelf [Package]
==> Executing phase : 'install' ==> Executing phase : 'install'
==> Successfully installed libelf ==> Successfully installed libelf
Fetch: 0.04s. Build: 7.95s. Total: 7.99s. Fetch: 0.04s. Build: 7.95s. Total: 7.99s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.12-vrv2ttbd34xlfoxy4jwt6qsjrcbalmmw [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.12-vrv2ttbd34xlfoxy4jwt6qsjrcbalmmw
The ``spack find`` command is used to query installed packages. Note that The ``spack find`` command is used to query installed packages. Note that
@ -258,21 +258,21 @@ existing package's hash matches the desired spec.
$ spack install libdwarf $ spack install libdwarf
==> Installing libdwarf ==> Installing libdwarf
==> libelf is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.13-csrt4qxfkhjgn5xg3zjpkir7xdnszl2a ==> libelf is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.13-csrt4qxfkhjgn5xg3zjpkir7xdnszl2a
==> Can not find version 20160507 in url_list ==> Can not find version 20160507 in url_list
==> Trying to fetch from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libdwarf/libdwarf-20160507.tar.gz ==> Trying to fetch from ~/spack/var/spack/cache/libdwarf/libdwarf-20160507.tar.gz
curl: (37) Couldn't open file /g/g0/becker33/SC16-spack/spack/var/spack/cache/libdwarf/libdwarf-20160507.tar.gz curl: (37) Couldn't open file ~/spack/var/spack/cache/libdwarf/libdwarf-20160507.tar.gz
==> Fetching from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libdwarf/libdwarf-20160507.tar.gz failed. ==> Fetching from ~/spack/var/spack/cache/libdwarf/libdwarf-20160507.tar.gz failed.
==> Trying to fetch from http://www.prevanders.net/libdwarf-20160507.tar.gz ==> Trying to fetch from http://www.prevanders.net/libdwarf-20160507.tar.gz
################################################################################################################################################################################# 100.0% ################################################################################################################################################################################# 100.0%
==> Staging archive: /g/g0/becker33/SC16-spack/spack/var/spack/stage/libdwarf-20160507-yfx6p3g3rkmqvcqbmtb34o6pln7pqvcz/libdwarf-20160507.tar.gz ==> Staging archive: ~/spack/var/spack/stage/libdwarf-20160507-yfx6p3g3rkmqvcqbmtb34o6pln7pqvcz/libdwarf-20160507.tar.gz
==> Created stage in /g/g0/becker33/SC16-spack/spack/var/spack/stage/libdwarf-20160507-yfx6p3g3rkmqvcqbmtb34o6pln7pqvcz ==> Created stage in ~/spack/var/spack/stage/libdwarf-20160507-yfx6p3g3rkmqvcqbmtb34o6pln7pqvcz
==> No patches needed for libdwarf ==> No patches needed for libdwarf
==> Building libdwarf [Package] ==> Building libdwarf [Package]
==> Executing phase : 'install' ==> Executing phase : 'install'
==> Successfully installed libdwarf ==> Successfully installed libdwarf
Fetch: 1.56s. Build: 33.59s. Total: 35.15s. Fetch: 1.56s. Build: 33.59s. Total: 35.15s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libdwarf-20160507-yfx6p3g3rkmqvcqbmtb34o6pln7pqvcz [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libdwarf-20160507-yfx6p3g3rkmqvcqbmtb34o6pln7pqvcz
Dependencies can be explicitly requested using the ``^`` sigil. Note that Dependencies can be explicitly requested using the ``^`` sigil. Note that
@ -284,27 +284,27 @@ top-level package, we can also specify about a dependency using ``^``.
$ spack install libdwarf ^libelf @0.8.12 %intel $ spack install libdwarf ^libelf @0.8.12 %intel
==> Installing libdwarf ==> Installing libdwarf
==> Installing libelf ==> Installing libelf
==> Trying to fetch from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libelf/libelf-0.8.12.tar.gz ==> Trying to fetch from ~/spack/var/spack/cache/libelf/libelf-0.8.12.tar.gz
################################################################################################################################################################################# 100.0% ################################################################################################################################################################################# 100.0%
==> Staging archive: /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.12-4blbe3qxqct3ymrfoxxnxysmybvbxay7/libelf-0.8.12.tar.gz ==> Staging archive: ~/spack/var/spack/stage/libelf-0.8.12-4blbe3qxqct3ymrfoxxnxysmybvbxay7/libelf-0.8.12.tar.gz
==> Created stage in /g/g0/becker33/SC16-spack/spack/var/spack/stage/libelf-0.8.12-4blbe3qxqct3ymrfoxxnxysmybvbxay7 ==> Created stage in ~/spack/var/spack/stage/libelf-0.8.12-4blbe3qxqct3ymrfoxxnxysmybvbxay7
==> No patches needed for libelf ==> No patches needed for libelf
==> Building libelf [Package] ==> Building libelf [Package]
==> Executing phase : 'install' ==> Executing phase : 'install'
==> Successfully installed libelf ==> Successfully installed libelf
Fetch: 0.04s. Build: 52.16s. Total: 52.19s. Fetch: 0.04s. Build: 52.16s. Total: 52.19s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/intel-16.0.3/libelf-0.8.12-4blbe3qxqct3ymrfoxxnxysmybvbxay7 [+] ~/spack/opt/spack/linux-redhat6-x86_64/intel-16.0.3/libelf-0.8.12-4blbe3qxqct3ymrfoxxnxysmybvbxay7
==> Can not find version 20160507 in url_list ==> Can not find version 20160507 in url_list
==> Trying to fetch from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libdwarf/libdwarf-20160507.tar.gz ==> Trying to fetch from ~/spack/var/spack/cache/libdwarf/libdwarf-20160507.tar.gz
################################################################################################################################################################################# 100.0% ################################################################################################################################################################################# 100.0%
==> Staging archive: /g/g0/becker33/SC16-spack/spack/var/spack/stage/libdwarf-20160507-csruprgucaujkfkrcywhwou7nbeis5fo/libdwarf-20160507.tar.gz ==> Staging archive: ~/spack/var/spack/stage/libdwarf-20160507-csruprgucaujkfkrcywhwou7nbeis5fo/libdwarf-20160507.tar.gz
==> Created stage in /g/g0/becker33/SC16-spack/spack/var/spack/stage/libdwarf-20160507-csruprgucaujkfkrcywhwou7nbeis5fo ==> Created stage in ~/spack/var/spack/stage/libdwarf-20160507-csruprgucaujkfkrcywhwou7nbeis5fo
==> No patches needed for libdwarf ==> No patches needed for libdwarf
==> Building libdwarf [Package] ==> Building libdwarf [Package]
==> Executing phase : 'install' ==> Executing phase : 'install'
==> Successfully installed libdwarf ==> Successfully installed libdwarf
Fetch: 0.40s. Build: 2m 17.29s. Total: 2m 17.69s. Fetch: 0.40s. Build: 2m 17.29s. Total: 2m 17.69s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/intel-16.0.3/libdwarf-20160507-csruprgucaujkfkrcywhwou7nbeis5fo [+] ~/spack/opt/spack/linux-redhat6-x86_64/intel-16.0.3/libdwarf-20160507-csruprgucaujkfkrcywhwou7nbeis5fo
Packages can also be referred to from the command line by their package Packages can also be referred to from the command line by their package
@ -321,18 +321,18 @@ packages share the prefix) then spack will report an error.
$ spack install libdwarf ^/vrv2ttb $ spack install libdwarf ^/vrv2ttb
==> Installing libdwarf ==> Installing libdwarf
==> libelf is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.12-vrv2ttbd34xlfoxy4jwt6qsjrcbalmmw ==> libelf is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.12-vrv2ttbd34xlfoxy4jwt6qsjrcbalmmw
==> Can not find version 20160507 in url_list ==> Can not find version 20160507 in url_list
==> Trying to fetch from file:///g/g0/becker33/SC16-spack/spack/var/spack/cache/libdwarf/libdwarf-20160507.tar.gz ==> Trying to fetch from ~/spack/var/spack/cache/libdwarf/libdwarf-20160507.tar.gz
#################################################################################################################################################################################################################################################### 100.0% #################################################################################################################################################################################################################################################### 100.0%
==> Staging archive: /g/g0/becker33/SC16-spack/spack/var/spack/stage/libdwarf-20160507-dtg3tgnp7htccoly26gduqlrgvnwcp5t/libdwarf-20160507.tar.gz ==> Staging archive: ~/spack/var/spack/stage/libdwarf-20160507-dtg3tgnp7htccoly26gduqlrgvnwcp5t/libdwarf-20160507.tar.gz
==> Created stage in /g/g0/becker33/SC16-spack/spack/var/spack/stage/libdwarf-20160507-dtg3tgnp7htccoly26gduqlrgvnwcp5t ==> Created stage in ~/spack/var/spack/stage/libdwarf-20160507-dtg3tgnp7htccoly26gduqlrgvnwcp5t
==> No patches needed for libdwarf ==> No patches needed for libdwarf
==> Building libdwarf [Package] ==> Building libdwarf [Package]
==> Executing phase : 'install' ==> Executing phase : 'install'
==> Successfully installed libdwarf ==> Successfully installed libdwarf
Fetch: 0.96s. Build: 24.03s. Total: 24.99s. Fetch: 0.96s. Build: 24.03s. Total: 24.99s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libdwarf-20160507-dtg3tgnp7htccoly26gduqlrgvnwcp5t [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libdwarf-20160507-dtg3tgnp7htccoly26gduqlrgvnwcp5t
The ``spack find`` command can also take a ``-d`` flag, which can show The ``spack find`` command can also take a ``-d`` flag, which can show
@ -395,7 +395,7 @@ dependency. If we install it "out of the box," it will build with
==> Building zlib [Package] ==> Building zlib [Package]
==> Successfully installed zlib ==> Successfully installed zlib
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> Installing openmpi ==> Installing openmpi
==> Installing hwloc ==> Installing hwloc
==> Installing libpciaccess ==> Installing libpciaccess
@ -403,43 +403,43 @@ dependency. If we install it "out of the box," it will build with
==> Building util-macros [Package] ==> Building util-macros [Package]
==> Successfully installed util-macros ==> Successfully installed util-macros
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/util-macros-1.19.0-pc6zhs4cnkmg2cv4et4fizsp6scuvacg [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/util-macros-1.19.0-pc6zhs4cnkmg2cv4et4fizsp6scuvacg
==> Installing libtool ==> Installing libtool
==> Installing m4 ==> Installing m4
==> Installing libsigsegv ==> Installing libsigsegv
==> Building libsigsegv [Package] ==> Building libsigsegv [Package]
==> Successfully installed libsigsegv ==> Successfully installed libsigsegv
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libsigsegv-2.10-q4cok3yber7lhf3jswg6mysg7oi53unh [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libsigsegv-2.10-q4cok3yber7lhf3jswg6mysg7oi53unh
==> Building m4 [Package] ==> Building m4 [Package]
==> Successfully installed m4 ==> Successfully installed m4
Fetch: . Build: 0.23s. Total: 0.23s. Fetch: . Build: 0.23s. Total: 0.23s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je
==> Building libtool [Package] ==> Building libtool [Package]
==> Successfully installed libtool ==> Successfully installed libtool
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libtool-2.4.6-rdx5nkfjwlvcanz5il3ys2pe34j4vxx5 [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libtool-2.4.6-rdx5nkfjwlvcanz5il3ys2pe34j4vxx5
==> Installing pkg-config ==> Installing pkg-config
==> Building pkg-config [Package] ==> Building pkg-config [Package]
==> Successfully installed pkg-config ==> Successfully installed pkg-config
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/pkg-config-0.29.1-wpjnlzahdw6ahkrgmqyeugkj2zhv4tui [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/pkg-config-0.29.1-wpjnlzahdw6ahkrgmqyeugkj2zhv4tui
==> Building libpciaccess [Package] ==> Building libpciaccess [Package]
==> Successfully installed libpciaccess ==> Successfully installed libpciaccess
Fetch: . Build: 0.10s. Total: 0.10s. Fetch: . Build: 0.10s. Total: 0.10s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libpciaccess-0.13.4-m2f6fpm22rpprq2ihkmfx6llf363264m [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libpciaccess-0.13.4-m2f6fpm22rpprq2ihkmfx6llf363264m
==> Building hwloc [Package] ==> Building hwloc [Package]
==> Successfully installed hwloc ==> Successfully installed hwloc
Fetch: . Build: 0.23s. Total: 0.23s. Fetch: . Build: 0.23s. Total: 0.23s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hwloc-1.11.4-xpb6hbl2hsze25cgdgfnoppn6rchhzaz [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hwloc-1.11.4-xpb6hbl2hsze25cgdgfnoppn6rchhzaz
==> Building openmpi [Package] ==> Building openmpi [Package]
==> Successfully installed openmpi ==> Successfully installed openmpi
Fetch: . Build: 0.35s. Total: 0.35s. Fetch: . Build: 0.35s. Total: 0.35s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn
==> Building hdf5 [AutotoolsPackage] ==> Building hdf5 [AutotoolsPackage]
==> Successfully installed hdf5 ==> Successfully installed hdf5
Fetch: . Build: 0.61s. Total: 0.61s. Fetch: . Build: 0.61s. Total: 0.61s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-ezvtnox35albuaxqryuondweyjgeo6es [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-ezvtnox35albuaxqryuondweyjgeo6es
Spack packages can also have variants. Boolean variants can be specified Spack packages can also have variants. Boolean variants can be specified
@ -453,11 +453,11 @@ support.
$ spack install --fake hdf5~mpi $ spack install --fake hdf5~mpi
==> Installing hdf5 ==> Installing hdf5
==> zlib is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh ==> zlib is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> Building hdf5 [AutotoolsPackage] ==> Building hdf5 [AutotoolsPackage]
==> Successfully installed hdf5 ==> Successfully installed hdf5
Fetch: . Build: 0.22s. Total: 0.22s. Fetch: . Build: 0.22s. Total: 0.22s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-twppaioxqn6lti4grgopnmhwcq3h2rpw [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-twppaioxqn6lti4grgopnmhwcq3h2rpw
We might also want to install HDF5 with a different MPI We might also want to install HDF5 with a different MPI
@ -477,12 +477,12 @@ by any of several providers.
$ spack install --fake hdf5+mpi ^mpich $ spack install --fake hdf5+mpi ^mpich
==> Installing hdf5 ==> Installing hdf5
==> mpich is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za ==> mpich is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za
==> zlib is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh ==> zlib is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> Building hdf5 [AutotoolsPackage] ==> Building hdf5 [AutotoolsPackage]
==> Successfully installed hdf5 ==> Successfully installed hdf5
Fetch: . Build: 0.38s. Total: 0.38s. Fetch: . Build: 0.38s. Total: 0.38s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-j36yfw25i6gdd3q4vwlupgkpwic4ua6m [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-j36yfw25i6gdd3q4vwlupgkpwic4ua6m
We'll do a quick check in on what we have installed so far. We'll do a quick check in on what we have installed so far.
@ -592,180 +592,180 @@ let's look at a more complicated package.
$ spack install --fake trilinos $ spack install --fake trilinos
==> Installing trilinos ==> Installing trilinos
==> Installing superlu-dist ==> Installing superlu-dist
==> openmpi is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn ==> openmpi is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn
==> Installing parmetis ==> Installing parmetis
==> openmpi is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn ==> openmpi is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn
==> Installing cmake ==> Installing cmake
==> Installing bzip2 ==> Installing bzip2
==> Building bzip2 [Package] ==> Building bzip2 [Package]
==> Successfully installed bzip2 ==> Successfully installed bzip2
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/bzip2-1.0.6-gll2xsahysy7ji5gkmfxwkofdt3mwjhs [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/bzip2-1.0.6-gll2xsahysy7ji5gkmfxwkofdt3mwjhs
==> expat is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/expat-2.2.0-mg5kwd3kluxdgorj32vzbp7aksg3vqej ==> expat is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/expat-2.2.0-mg5kwd3kluxdgorj32vzbp7aksg3vqej
==> Installing ncurses ==> Installing ncurses
==> Building ncurses [Package] ==> Building ncurses [Package]
==> Successfully installed ncurses ==> Successfully installed ncurses
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[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/ncurses-6.0-fttg4astvrtq2buey4wq66tnyu7bgj2c [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/ncurses-6.0-fttg4astvrtq2buey4wq66tnyu7bgj2c
==> zlib is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh ==> zlib is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> Installing openssl ==> Installing openssl
==> zlib is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh ==> zlib is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> Building openssl [Package] ==> Building openssl [Package]
==> Successfully installed openssl ==> Successfully installed openssl
Fetch: . Build: 0.23s. Total: 0.23s. Fetch: . Build: 0.23s. Total: 0.23s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openssl-1.0.2j-kt5xyk2dkho6tzadnqlbnbujmljprylg [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openssl-1.0.2j-kt5xyk2dkho6tzadnqlbnbujmljprylg
==> Installing libarchive ==> Installing libarchive
==> Installing lzma ==> Installing lzma
==> Building lzma [Package] ==> Building lzma [Package]
==> Successfully installed lzma ==> Successfully installed lzma
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[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/lzma-4.32.7-hah2cdo3zbulz6yg5do6dvnfn6en5v5c [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/lzma-4.32.7-hah2cdo3zbulz6yg5do6dvnfn6en5v5c
==> Installing nettle ==> Installing nettle
==> m4 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je ==> m4 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je
==> Installing gmp ==> Installing gmp
==> m4 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je ==> m4 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je
==> Building gmp [AutotoolsPackage] ==> Building gmp [AutotoolsPackage]
==> Successfully installed gmp ==> Successfully installed gmp
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gmp-6.1.1-uwn4gfdtq3sywy5uf4f7znrh66oybikf [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gmp-6.1.1-uwn4gfdtq3sywy5uf4f7znrh66oybikf
==> Building nettle [Package] ==> Building nettle [Package]
==> Successfully installed nettle ==> Successfully installed nettle
Fetch: . Build: 0.18s. Total: 0.18s. Fetch: . Build: 0.18s. Total: 0.18s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/nettle-3.2-w4ieitifcmrldo4ra7as63apagzf56ja [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/nettle-3.2-w4ieitifcmrldo4ra7as63apagzf56ja
==> bzip2 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/bzip2-1.0.6-gll2xsahysy7ji5gkmfxwkofdt3mwjhs ==> bzip2 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/bzip2-1.0.6-gll2xsahysy7ji5gkmfxwkofdt3mwjhs
==> expat is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/expat-2.2.0-mg5kwd3kluxdgorj32vzbp7aksg3vqej ==> expat is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/expat-2.2.0-mg5kwd3kluxdgorj32vzbp7aksg3vqej
==> Installing libxml2 ==> Installing libxml2
==> Installing xz ==> Installing xz
==> Building xz [Package] ==> Building xz [Package]
==> Successfully installed xz ==> Successfully installed xz
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/xz-5.2.2-bxh6cpyqqozazm5okvjqk23sww3gccnf [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/xz-5.2.2-bxh6cpyqqozazm5okvjqk23sww3gccnf
==> zlib is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh ==> zlib is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> Building libxml2 [Package] ==> Building libxml2 [Package]
==> Successfully installed libxml2 ==> Successfully installed libxml2
Fetch: . Build: 0.35s. Total: 0.35s. Fetch: . Build: 0.35s. Total: 0.35s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libxml2-2.9.4-un323rppyu5qipkegyf7flmymvtmunrx [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libxml2-2.9.4-un323rppyu5qipkegyf7flmymvtmunrx
==> zlib is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh ==> zlib is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> Installing lz4 ==> Installing lz4
==> Building lz4 [Package] ==> Building lz4 [Package]
==> Successfully installed lz4 ==> Successfully installed lz4
Fetch: . Build: 0.12s. Total: 0.12s. Fetch: . Build: 0.12s. Total: 0.12s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/lz4-131-ivy2fcaw7ywujx74weebdi5bsm7q4vkc [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/lz4-131-ivy2fcaw7ywujx74weebdi5bsm7q4vkc
==> openssl is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openssl-1.0.2j-kt5xyk2dkho6tzadnqlbnbujmljprylg ==> openssl is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openssl-1.0.2j-kt5xyk2dkho6tzadnqlbnbujmljprylg
==> xz is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/xz-5.2.2-bxh6cpyqqozazm5okvjqk23sww3gccnf ==> xz is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/xz-5.2.2-bxh6cpyqqozazm5okvjqk23sww3gccnf
==> Installing lzo ==> Installing lzo
==> Building lzo [AutotoolsPackage] ==> Building lzo [AutotoolsPackage]
==> Successfully installed lzo ==> Successfully installed lzo
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/lzo-2.09-dlgnm74ozo6baactkft5oah2jre2ri2i [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/lzo-2.09-dlgnm74ozo6baactkft5oah2jre2ri2i
==> Building libarchive [Package] ==> Building libarchive [Package]
==> Successfully installed libarchive ==> Successfully installed libarchive
Fetch: . Build: 1.35s. Total: 1.35s. Fetch: . Build: 1.35s. Total: 1.35s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libarchive-3.2.1-biq3kebw7vel7njusill7vv7mjldkqjv [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libarchive-3.2.1-biq3kebw7vel7njusill7vv7mjldkqjv
==> xz is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/xz-5.2.2-bxh6cpyqqozazm5okvjqk23sww3gccnf ==> xz is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/xz-5.2.2-bxh6cpyqqozazm5okvjqk23sww3gccnf
==> Installing curl ==> Installing curl
==> zlib is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh ==> zlib is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> openssl is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openssl-1.0.2j-kt5xyk2dkho6tzadnqlbnbujmljprylg ==> openssl is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openssl-1.0.2j-kt5xyk2dkho6tzadnqlbnbujmljprylg
==> Building curl [Package] ==> Building curl [Package]
==> Successfully installed curl ==> Successfully installed curl
Fetch: . Build: 0.36s. Total: 0.36s. Fetch: . Build: 0.36s. Total: 0.36s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/curl-7.50.3-oze4gqutj4x2isbkcn5ob2bhhxbskod4 [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/curl-7.50.3-oze4gqutj4x2isbkcn5ob2bhhxbskod4
==> Building cmake [Package] ==> Building cmake [Package]
==> Successfully installed cmake ==> Successfully installed cmake
Fetch: . Build: 1.64s. Total: 1.64s. Fetch: . Build: 1.64s. Total: 1.64s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e
==> Installing metis ==> Installing metis
==> cmake is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e ==> cmake is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e
==> Building metis [Package] ==> Building metis [Package]
==> Successfully installed metis ==> Successfully installed metis
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv
==> Building parmetis [Package] ==> Building parmetis [Package]
==> Successfully installed parmetis ==> Successfully installed parmetis
Fetch: . Build: 0.62s. Total: 0.62s. Fetch: . Build: 0.62s. Total: 0.62s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/parmetis-4.0.3-rtg6hml5t6acdcnxomn3l5zfiful4d2t [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/parmetis-4.0.3-rtg6hml5t6acdcnxomn3l5zfiful4d2t
==> Installing openblas ==> Installing openblas
==> Building openblas [Package] ==> Building openblas [Package]
==> Successfully installed openblas ==> Successfully installed openblas
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> metis is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv ==> metis is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv
==> Building superlu-dist [Package] ==> Building superlu-dist [Package]
==> Successfully installed superlu-dist ==> Successfully installed superlu-dist
Fetch: . Build: 0.85s. Total: 0.85s. Fetch: . Build: 0.85s. Total: 0.85s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/superlu-dist-5.1.1-25r6jlvkpjnkiuwt2rtbzhk3l3htuxs7 [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/superlu-dist-5.1.1-25r6jlvkpjnkiuwt2rtbzhk3l3htuxs7
==> cmake is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e ==> cmake is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e
==> Installing glm ==> Installing glm
==> cmake is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e ==> cmake is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e
==> Building glm [Package] ==> Building glm [Package]
==> Successfully installed glm ==> Successfully installed glm
Fetch: . Build: 0.12s. Total: 0.12s. Fetch: . Build: 0.12s. Total: 0.12s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/glm-0.9.7.1-7a6oho4aerz7vftxd5ur7lywscht2iry [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/glm-0.9.7.1-7a6oho4aerz7vftxd5ur7lywscht2iry
==> Installing hypre ==> Installing hypre
==> openmpi is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn ==> openmpi is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn
==> openblas is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt ==> openblas is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> Building hypre [Package] ==> Building hypre [Package]
==> Successfully installed hypre ==> Successfully installed hypre
Fetch: . Build: 0.61s. Total: 0.61s. Fetch: . Build: 0.61s. Total: 0.61s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hypre-2.11.1-lf7hcejiiww5peesh57quda72z67veit [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hypre-2.11.1-lf7hcejiiww5peesh57quda72z67veit
==> metis is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv ==> metis is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv
==> Installing netlib-scalapack ==> Installing netlib-scalapack
==> openmpi is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn ==> openmpi is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn
==> cmake is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e ==> cmake is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e
==> openblas is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt ==> openblas is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> Building netlib-scalapack [Package] ==> Building netlib-scalapack [Package]
==> Successfully installed netlib-scalapack ==> Successfully installed netlib-scalapack
Fetch: . Build: 0.61s. Total: 0.61s. Fetch: . Build: 0.61s. Total: 0.61s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netlib-scalapack-2.0.2-dvcanz2qq4dfcexznbhbmzbxfj43uz4q [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netlib-scalapack-2.0.2-dvcanz2qq4dfcexznbhbmzbxfj43uz4q
==> Installing suite-sparse ==> Installing suite-sparse
==> Installing tbb ==> Installing tbb
==> Building tbb [Package] ==> Building tbb [Package]
==> Successfully installed tbb ==> Successfully installed tbb
Fetch: . Build: 0.12s. Total: 0.12s. Fetch: . Build: 0.12s. Total: 0.12s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/tbb-4.4.4-zawzkkhrmdonbjpj3a5bb6gkgnqlrjeu [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/tbb-4.4.4-zawzkkhrmdonbjpj3a5bb6gkgnqlrjeu
==> openblas is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt ==> openblas is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> metis is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv ==> metis is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv
==> Building suite-sparse [Package] ==> Building suite-sparse [Package]
==> Successfully installed suite-sparse ==> Successfully installed suite-sparse
Fetch: . Build: 0.49s. Total: 0.49s. Fetch: . Build: 0.49s. Total: 0.49s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/suite-sparse-4.5.3-lvur6hriy2j7xfjwh5punp3exwpynzm6 [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/suite-sparse-4.5.3-lvur6hriy2j7xfjwh5punp3exwpynzm6
==> openmpi is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn ==> openmpi is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn
==> Installing netcdf ==> Installing netcdf
==> m4 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je ==> m4 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je
==> curl is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/curl-7.50.3-oze4gqutj4x2isbkcn5ob2bhhxbskod4 ==> curl is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/curl-7.50.3-oze4gqutj4x2isbkcn5ob2bhhxbskod4
==> zlib is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh ==> zlib is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> hdf5 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-ezvtnox35albuaxqryuondweyjgeo6es ==> hdf5 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-ezvtnox35albuaxqryuondweyjgeo6es
==> Building netcdf [Package] ==> Building netcdf [Package]
==> Successfully installed netcdf ==> Successfully installed netcdf
Fetch: . Build: 0.90s. Total: 0.90s. Fetch: . Build: 0.90s. Total: 0.90s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netcdf-4.4.1-tcl4zbrmdfrit2cqlaxig6xieu5h552j [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netcdf-4.4.1-tcl4zbrmdfrit2cqlaxig6xieu5h552j
==> Installing mumps ==> Installing mumps
==> netlib-scalapack is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netlib-scalapack-2.0.2-dvcanz2qq4dfcexznbhbmzbxfj43uz4q ==> netlib-scalapack is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netlib-scalapack-2.0.2-dvcanz2qq4dfcexznbhbmzbxfj43uz4q
==> openmpi is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn ==> openmpi is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openmpi-2.0.1-j4cgoq4furxvr73pq72r2qgywgksw3qn
==> openblas is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt ==> openblas is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> Building mumps [Package] ==> Building mumps [Package]
==> Successfully installed mumps ==> Successfully installed mumps
Fetch: . Build: 0.74s. Total: 0.74s. Fetch: . Build: 0.74s. Total: 0.74s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mumps-5.0.2-kr5r4nnx5tfcacxnk3ii5dsxbe6pu5fy [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mumps-5.0.2-kr5r4nnx5tfcacxnk3ii5dsxbe6pu5fy
==> Installing matio ==> Installing matio
==> Building matio [Package] ==> Building matio [Package]
==> Successfully installed matio ==> Successfully installed matio
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/matio-1.5.2-4zrozucookychlvc4q53omp2zyfk2bed [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/matio-1.5.2-4zrozucookychlvc4q53omp2zyfk2bed
==> Installing boost ==> Installing boost
==> bzip2 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/bzip2-1.0.6-gll2xsahysy7ji5gkmfxwkofdt3mwjhs ==> bzip2 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/bzip2-1.0.6-gll2xsahysy7ji5gkmfxwkofdt3mwjhs
==> zlib is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh ==> zlib is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> Building boost [Package] ==> Building boost [Package]
==> Successfully installed boost ==> Successfully installed boost
Fetch: . Build: 0.35s. Total: 0.35s. Fetch: . Build: 0.35s. Total: 0.35s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/boost-1.62.0-je7eqvzt74kezwhh55y5lwt5dy6pnali [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/boost-1.62.0-je7eqvzt74kezwhh55y5lwt5dy6pnali
==> parmetis is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/parmetis-4.0.3-rtg6hml5t6acdcnxomn3l5zfiful4d2t ==> parmetis is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/parmetis-4.0.3-rtg6hml5t6acdcnxomn3l5zfiful4d2t
==> openblas is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt ==> openblas is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> hdf5 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-ezvtnox35albuaxqryuondweyjgeo6es ==> hdf5 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-ezvtnox35albuaxqryuondweyjgeo6es
==> Building trilinos [Package] ==> Building trilinos [Package]
==> Successfully installed trilinos ==> Successfully installed trilinos
Fetch: . Build: 2.63s. Total: 2.63s. Fetch: . Build: 2.63s. Total: 2.63s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/trilinos-12.8.1-uvd6dfd7x4uyvck4awo3r3frudihn4ar [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/trilinos-12.8.1-uvd6dfd7x4uyvck4awo3r3frudihn4ar
Now we're starting to see the power of Spack. Trilinos has 11 top level Now we're starting to see the power of Spack. Trilinos has 11 top level
@ -785,67 +785,67 @@ with ``mpich``:
$ spack install --fake trilinos ^hdf5+mpi ^mpich $ spack install --fake trilinos ^hdf5+mpi ^mpich
==> Installing trilinos ==> Installing trilinos
==> Installing superlu-dist ==> Installing superlu-dist
==> mpich is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za ==> mpich is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za
==> metis is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv ==> metis is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv
==> Installing parmetis ==> Installing parmetis
==> mpich is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za ==> mpich is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za
==> metis is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv ==> metis is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv
==> cmake is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e ==> cmake is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e
==> Building parmetis [Package] ==> Building parmetis [Package]
==> Successfully installed parmetis ==> Successfully installed parmetis
Fetch: . Build: 0.38s. Total: 0.38s. Fetch: . Build: 0.38s. Total: 0.38s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/parmetis-4.0.3-43kbtni6p5y446c6qdkybq4htj7ot4zn [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/parmetis-4.0.3-43kbtni6p5y446c6qdkybq4htj7ot4zn
==> openblas is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt ==> openblas is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> Building superlu-dist [Package] ==> Building superlu-dist [Package]
==> Successfully installed superlu-dist ==> Successfully installed superlu-dist
Fetch: . Build: 0.61s. Total: 0.61s. Fetch: . Build: 0.61s. Total: 0.61s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/superlu-dist-5.1.1-46uuupehmonx5jicc6xnegnud2n5jqyl [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/superlu-dist-5.1.1-46uuupehmonx5jicc6xnegnud2n5jqyl
==> cmake is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e ==> cmake is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e
==> glm is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/glm-0.9.7.1-7a6oho4aerz7vftxd5ur7lywscht2iry ==> glm is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/glm-0.9.7.1-7a6oho4aerz7vftxd5ur7lywscht2iry
==> Installing hypre ==> Installing hypre
==> mpich is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za ==> mpich is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za
==> openblas is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt ==> openblas is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> Building hypre [Package] ==> Building hypre [Package]
==> Successfully installed hypre ==> Successfully installed hypre
Fetch: . Build: 0.37s. Total: 0.37s. Fetch: . Build: 0.37s. Total: 0.37s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hypre-2.11.1-6ajnyymoivs5apajd7thjisae36jv4lz [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hypre-2.11.1-6ajnyymoivs5apajd7thjisae36jv4lz
==> metis is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv ==> metis is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/metis-5.1.0-ithifyl4xvqbn76js23wsb4tjnztrbdv
==> Installing netlib-scalapack ==> Installing netlib-scalapack
==> mpich is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za ==> mpich is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za
==> cmake is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e ==> cmake is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/cmake-3.6.1-n2nkknrku6dvuneo3rjumim7axt7n36e
==> openblas is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt ==> openblas is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> Building netlib-scalapack [Package] ==> Building netlib-scalapack [Package]
==> Successfully installed netlib-scalapack ==> Successfully installed netlib-scalapack
Fetch: . Build: 0.37s. Total: 0.37s. Fetch: . Build: 0.37s. Total: 0.37s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netlib-scalapack-2.0.2-dayeep27omm26wksd3iqvbu3gezc2eoh [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netlib-scalapack-2.0.2-dayeep27omm26wksd3iqvbu3gezc2eoh
==> suite-sparse is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/suite-sparse-4.5.3-lvur6hriy2j7xfjwh5punp3exwpynzm6 ==> suite-sparse is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/suite-sparse-4.5.3-lvur6hriy2j7xfjwh5punp3exwpynzm6
==> Installing netcdf ==> Installing netcdf
==> m4 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je ==> m4 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je
==> curl is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/curl-7.50.3-oze4gqutj4x2isbkcn5ob2bhhxbskod4 ==> curl is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/curl-7.50.3-oze4gqutj4x2isbkcn5ob2bhhxbskod4
==> zlib is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh ==> zlib is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/zlib-1.2.8-ayc4jq7vxuzge5n444gutvskeytfdruh
==> hdf5 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-j36yfw25i6gdd3q4vwlupgkpwic4ua6m ==> hdf5 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-j36yfw25i6gdd3q4vwlupgkpwic4ua6m
==> Building netcdf [Package] ==> Building netcdf [Package]
==> Successfully installed netcdf ==> Successfully installed netcdf
Fetch: . Build: 0.67s. Total: 0.67s. Fetch: . Build: 0.67s. Total: 0.67s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netcdf-4.4.1-gfemi4jk4qltvp33xhtpkam7dozbqvhq [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netcdf-4.4.1-gfemi4jk4qltvp33xhtpkam7dozbqvhq
==> Installing mumps ==> Installing mumps
==> mpich is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za ==> mpich is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za
==> netlib-scalapack is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netlib-scalapack-2.0.2-dayeep27omm26wksd3iqvbu3gezc2eoh ==> netlib-scalapack is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/netlib-scalapack-2.0.2-dayeep27omm26wksd3iqvbu3gezc2eoh
==> openblas is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt ==> openblas is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> Building mumps [Package] ==> Building mumps [Package]
==> Successfully installed mumps ==> Successfully installed mumps
Fetch: . Build: 0.49s. Total: 0.49s. Fetch: . Build: 0.49s. Total: 0.49s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mumps-5.0.2-w7t5pl3jhhwitfiyer63zj6zv7idkt3m [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mumps-5.0.2-w7t5pl3jhhwitfiyer63zj6zv7idkt3m
==> mpich is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za ==> mpich is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpich-3.2-5jlp2ndnsb67txggraglu47vjmayx5za
==> matio is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/matio-1.5.2-4zrozucookychlvc4q53omp2zyfk2bed ==> matio is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/matio-1.5.2-4zrozucookychlvc4q53omp2zyfk2bed
==> boost is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/boost-1.62.0-je7eqvzt74kezwhh55y5lwt5dy6pnali ==> boost is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/boost-1.62.0-je7eqvzt74kezwhh55y5lwt5dy6pnali
==> parmetis is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/parmetis-4.0.3-43kbtni6p5y446c6qdkybq4htj7ot4zn ==> parmetis is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/parmetis-4.0.3-43kbtni6p5y446c6qdkybq4htj7ot4zn
==> openblas is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt ==> openblas is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/openblas-0.2.19-bwofa7fhff6od5zn56vy3j4eeyupsqgt
==> hdf5 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-j36yfw25i6gdd3q4vwlupgkpwic4ua6m ==> hdf5 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-j36yfw25i6gdd3q4vwlupgkpwic4ua6m
==> Building trilinos [Package] ==> Building trilinos [Package]
==> Successfully installed trilinos ==> Successfully installed trilinos
Fetch: . Build: 2.42s. Total: 2.42s. Fetch: . Build: 2.42s. Total: 2.42s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/trilinos-12.8.1-ffwrpxnq7lhiw2abxn2u7ffr4jjsdwep [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/trilinos-12.8.1-ffwrpxnq7lhiw2abxn2u7ffr4jjsdwep
We see that every package in the trilinos DAG that depends on MPI now We see that every package in the trilinos DAG that depends on MPI now
uses ``mpich``. uses ``mpich``.
@ -1132,18 +1132,18 @@ command.
$ spack find -pe $ spack find -pe
==> 10 installed packages. ==> 10 installed packages.
-- linux-redhat6-x86_64 / gcc@4.4.7 ----------------------------- -- linux-redhat6-x86_64 / gcc@4.4.7 -----------------------------
hdf5@1.10.0-patch1 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-twppaioxqn6lti4grgopnmhwcq3h2rpw hdf5@1.10.0-patch1 ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-twppaioxqn6lti4grgopnmhwcq3h2rpw
hdf5@1.10.0-patch1 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-j36yfw25i6gdd3q4vwlupgkpwic4ua6m hdf5@1.10.0-patch1 ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-j36yfw25i6gdd3q4vwlupgkpwic4ua6m
hdf5@1.10.0-patch1 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-ezvtnox35albuaxqryuondweyjgeo6es hdf5@1.10.0-patch1 ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/hdf5-1.10.0-patch1-ezvtnox35albuaxqryuondweyjgeo6es
libdwarf@20160507 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libdwarf-20160507-dtg3tgnp7htccoly26gduqlrgvnwcp5t libdwarf@20160507 ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libdwarf-20160507-dtg3tgnp7htccoly26gduqlrgvnwcp5t
libdwarf@20160507 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libdwarf-20160507-yfx6p3g3rkmqvcqbmtb34o6pln7pqvcz libdwarf@20160507 ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libdwarf-20160507-yfx6p3g3rkmqvcqbmtb34o6pln7pqvcz
libelf@0.8.12 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.12-ipggckv6i7h44iryzfa4dwdela32a7fy libelf@0.8.12 ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.12-ipggckv6i7h44iryzfa4dwdela32a7fy
libelf@0.8.12 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.12-vrv2ttbd34xlfoxy4jwt6qsjrcbalmmw libelf@0.8.12 ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.12-vrv2ttbd34xlfoxy4jwt6qsjrcbalmmw
libelf@0.8.13 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.13-csrt4qxfkhjgn5xg3zjpkir7xdnszl2a libelf@0.8.13 ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/libelf-0.8.13-csrt4qxfkhjgn5xg3zjpkir7xdnszl2a
trilinos@12.8.1 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/trilinos-12.8.1-uvd6dfd7x4uyvck4awo3r3frudihn4ar trilinos@12.8.1 ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/trilinos-12.8.1-uvd6dfd7x4uyvck4awo3r3frudihn4ar
-- linux-redhat6-x86_64 / intel@16.0.3 -------------------------- -- linux-redhat6-x86_64 / intel@16.0.3 --------------------------
libelf@0.8.13 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/intel-16.0.3/libelf-0.8.13-7wgp32xksatkvw2tbssmehw2t5tnxndj libelf@0.8.13 ~/spack/opt/spack/linux-redhat6-x86_64/intel-16.0.3/libelf-0.8.13-7wgp32xksatkvw2tbssmehw2t5tnxndj
--------------------- ---------------------
@ -1184,56 +1184,56 @@ compilers built with Spack can be added to the configuration.
$ spack install --fake gcc@6.1.0 $ spack install --fake gcc@6.1.0
==> Installing gcc ==> Installing gcc
==> gmp is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gmp-6.1.1-uwn4gfdtq3sywy5uf4f7znrh66oybikf ==> gmp is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gmp-6.1.1-uwn4gfdtq3sywy5uf4f7znrh66oybikf
==> Installing isl ==> Installing isl
==> gmp is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gmp-6.1.1-uwn4gfdtq3sywy5uf4f7znrh66oybikf ==> gmp is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gmp-6.1.1-uwn4gfdtq3sywy5uf4f7znrh66oybikf
==> Building isl [Package] ==> Building isl [Package]
==> Successfully installed isl ==> Successfully installed isl
Fetch: . Build: 0.19s. Total: 0.19s. Fetch: . Build: 0.19s. Total: 0.19s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/isl-0.14-hs2w7mjjjaakkmbbv5yvfqf7yyzhorl6 [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/isl-0.14-hs2w7mjjjaakkmbbv5yvfqf7yyzhorl6
==> Installing mpc ==> Installing mpc
==> gmp is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gmp-6.1.1-uwn4gfdtq3sywy5uf4f7znrh66oybikf ==> gmp is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gmp-6.1.1-uwn4gfdtq3sywy5uf4f7znrh66oybikf
==> Installing mpfr ==> Installing mpfr
==> gmp is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gmp-6.1.1-uwn4gfdtq3sywy5uf4f7znrh66oybikf ==> gmp is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gmp-6.1.1-uwn4gfdtq3sywy5uf4f7znrh66oybikf
==> Building mpfr [Package] ==> Building mpfr [Package]
==> Successfully installed mpfr ==> Successfully installed mpfr
Fetch: . Build: 0.17s. Total: 0.17s. Fetch: . Build: 0.17s. Total: 0.17s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpfr-3.1.4-7kt5ij437khredfq4bvnyu22t3fmtfvt [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpfr-3.1.4-7kt5ij437khredfq4bvnyu22t3fmtfvt
==> Building mpc [Package] ==> Building mpc [Package]
==> Successfully installed mpc ==> Successfully installed mpc
Fetch: . Build: 0.28s. Total: 0.28s. Fetch: . Build: 0.28s. Total: 0.28s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpc-1.0.3-g5taq6lt3zuy5l2jtggi5lctxnl4la5u [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpc-1.0.3-g5taq6lt3zuy5l2jtggi5lctxnl4la5u
==> Installing binutils ==> Installing binutils
==> m4 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je ==> m4 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je
==> Installing bison ==> Installing bison
==> m4 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je ==> m4 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je
==> Building bison [Package] ==> Building bison [Package]
==> Successfully installed bison ==> Successfully installed bison
Fetch: . Build: 0.12s. Total: 0.12s. Fetch: . Build: 0.12s. Total: 0.12s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/bison-3.0.4-hkhfysfvq5l6rsns67g2htmkpxauvnwa [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/bison-3.0.4-hkhfysfvq5l6rsns67g2htmkpxauvnwa
==> Installing flex ==> Installing flex
==> m4 is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je ==> m4 is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/m4-1.4.17-qijdzvhjyybrtwbqm73vykhmkaqro3je
==> bison is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/bison-3.0.4-hkhfysfvq5l6rsns67g2htmkpxauvnwa ==> bison is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/bison-3.0.4-hkhfysfvq5l6rsns67g2htmkpxauvnwa
==> Building flex [Package] ==> Building flex [Package]
==> Successfully installed flex ==> Successfully installed flex
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/flex-2.6.0-qd6d73rdfrozdrsdpimvl4tj7d5ps7qg [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/flex-2.6.0-qd6d73rdfrozdrsdpimvl4tj7d5ps7qg
==> Building binutils [Package] ==> Building binutils [Package]
==> Successfully installed binutils ==> Successfully installed binutils
Fetch: . Build: 0.11s. Total: 0.11s. Fetch: . Build: 0.11s. Total: 0.11s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/binutils-2.27-iq2hry3gvaxszmwwbnll7njgdgaek56o [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/binutils-2.27-iq2hry3gvaxszmwwbnll7njgdgaek56o
==> mpfr is already installed in /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpfr-3.1.4-7kt5ij437khredfq4bvnyu22t3fmtfvt ==> mpfr is already installed in ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/mpfr-3.1.4-7kt5ij437khredfq4bvnyu22t3fmtfvt
==> Building gcc [Package] ==> Building gcc [Package]
==> Successfully installed gcc ==> Successfully installed gcc
Fetch: . Build: 0.66s. Total: 0.66s. Fetch: . Build: 0.66s. Total: 0.66s.
[+] /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gcc-6.1.0-j5576zbsot2ydljlthjzhsirsesnogvh [+] ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gcc-6.1.0-j5576zbsot2ydljlthjzhsirsesnogvh
$ spack find -p gcc $ spack find -p gcc
==> 1 installed packages. ==> 1 installed packages.
-- linux-redhat6-x86_64 / gcc@4.4.7 ----------------------------- -- linux-redhat6-x86_64 / gcc@4.4.7 -----------------------------
gcc@6.1.0 /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gcc-6.1.0-j5576zbsot2ydljlthjzhsirsesnogvh gcc@6.1.0 ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gcc-6.1.0-j5576zbsot2ydljlthjzhsirsesnogvh
If we had done a "real" install of gcc, we could add it to our If we had done a "real" install of gcc, we could add it to our
@ -1243,13 +1243,13 @@ return no new compilers.
.. code-block:: console .. code-block:: console
$ spack compiler add /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gcc-6.1.0-j5576zbsot2ydljlthjzhsirsesnogvh/bin $ spack compiler add ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gcc-6.1.0-j5576zbsot2ydljlthjzhsirsesnogvh/bin
==> Found no new compilers ==> Found no new compilers
If we had done a real install, the output would have been as follows: If we had done a real install, the output would have been as follows:
.. code-block:: console .. code-block:: console
$ spack compiler add /g/g0/becker33/SC16-spack/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gcc-6.1.0-j5576zbsot2ydljlthjzhsirsesnogvh/bin $ spack compiler add ~/spack/opt/spack/linux-redhat6-x86_64/gcc-4.4.7/gcc-6.1.0-j5576zbsot2ydljlthjzhsirsesnogvh/bin
==> Added 1 new compiler to /g/g0/becker33/.spack/linux/compilers.yaml ==> Added 1 new compiler to ~/.spack/linux/compilers.yaml
gcc@6.1.0 gcc@6.1.0

6
lib/spack/docs/workflows.rst
View File

@ -237,7 +237,7 @@ location --install-dir`` commands. For example:
.. code-block:: console .. code-block:: console
$ spack location --install-dir cmake $ spack location --install-dir cmake
/home/me/spack2/opt/spack/linux-SuSE11-x86_64/gcc-5.3.0/cmake-3.6.0-7cxrynb6esss6jognj23ak55fgxkwtx7 ~/spack/opt/spack/linux-SuSE11-x86_64/gcc-5.3.0/cmake-3.6.0-7cxrynb6esss6jognj23ak55fgxkwtx7
This gives the root of the Spack package; relevant binaries may be This gives the root of the Spack package; relevant binaries may be
found within it. For example: found within it. For example:
@ -251,8 +251,8 @@ Standard UNIX tools can find binaries as well. For example:
.. code-block:: console .. code-block:: console
$ find ~/spack2/opt -name cmake | grep bin $ find ~/spack/opt -name cmake | grep bin
/home/me/spack2/opt/spack/linux-SuSE11-x86_64/gcc-5.3.0/cmake-3.6.0-7cxrynb6esss6jognj23ak55fgxkwtx7/bin/cmake ~/spack/opt/spack/linux-SuSE11-x86_64/gcc-5.3.0/cmake-3.6.0-7cxrynb6esss6jognj23ak55fgxkwtx7/bin/cmake
These methods are suitable, for example, for setting up build These methods are suitable, for example, for setting up build
processes or GUIs that need to know the location of particular tools. processes or GUIs that need to know the location of particular tools.