mummer4: patching to allow building with %gcc@13: (#38292)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk> Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
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var/spack/repos/builtin/packages/mummer4/48bit_index.patch
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var/spack/repos/builtin/packages/mummer4/48bit_index.patch
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@ -0,0 +1,10 @@
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--- include/mummer/48bit_index.hpp 2020-10-01 01:47:50.000000000 +0100
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+++ include/mummer/48bit_index.hpp.patched 2023-06-09 12:07:09.949856479 +0100
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@@ -6,6 +6,7 @@
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#endif
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+#include <cstdint>
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#include "48bit_iterator.hpp"
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template<typename IDX>
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struct fortyeight_index {
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@ -25,3 +25,6 @@ class Mummer4(AutotoolsPackage):
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depends_on("perl@5.6.0:", type=("build", "run"))
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depends_on("awk", type="run")
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depends_on("sed", type="run")
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# Adds missing inclusion of <cstdint>
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patch("48bit_index.patch", level=0, when="%gcc@13:")
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