Remove deprecated versions and packages (#37895)

This PR removes deprecated versions for all packages that I'm maintaining. In future Spack releases, I'm planning to do this on a much larger scale, but we can hold off until we have better reproducibility.

I'm hoping that this will improve the maintainability of these packages. If any other maintainers of these recipes would like to retain any of these deprecated versions, or add new versions, speak now or forever hold your peace 😄 

---------

Co-authored-by: adamjstewart <adamjstewart@users.noreply.github.com>

var/spack/repos/builtin/packages/fenics-dolfinx/package.py

@@ -19,21 +19,6 @@ class FenicsDolfinx(CMakePackage):
     version("0.5.1", sha256="a570e3f6ed8e7c570e7e61d0e6fd44fa9dad2c5f8f1f48a6dc9ad22bacfbc973")
     version("0.5.0", sha256="503c70c01a44d1ffe48e052ca987693a49f8d201877652cabbe2a44eb3b7c040")
     version("0.4.1", sha256="68dcf29a26c750fcea5e02d8d58411e3b054313c3bf6fcbc1d0f08dd2851117f")
-    version(
-        "0.3.0",
-        sha256="4857d0fcb44a4e9bf9eb298ba5377abdee17a7ad0327448bdd06cce73d109bed",
-        deprecated=True,
-    )
-    version(
-        "0.2.0",
-        sha256="e6462fc3b9653d335c28096f9b0393f966c55a64c77ed64cc6c949406cb1f2c3",
-        deprecated=True,
-    )
-    version(
-        "0.1.0",
-        sha256="0269379769b5b6d4d1864ded64402ecaea08054c2a5793c8685ea15a59af5e33",
-        deprecated=True,
-    )
 
     conflicts(
         "%gcc@:9.10",
@@ -53,22 +38,14 @@ class FenicsDolfinx(CMakePackage):
         default=("parmetis",),
         values=("kahip", "parmetis", "scotch"),
         multi=True,
-        when="@0.4.0:",
     )
-    variant("kahip", default=False, when="@0.1.0:0.3.0", description="kahip support")
-    variant("parmetis", default=False, when="@0.1.0:0.3.0", description="parmetis support")
 
-    # Graph partitioner dependencies for @0.4.0:
+    # Graph partitioner dependencies
     depends_on("kahip@3.12:", when="partitioners=kahip @0.5.0:")
     depends_on("kahip@3.11", when="partitioners=kahip @:0.4.1")
     depends_on("parmetis", when="partitioners=parmetis")
     depends_on("scotch+mpi", when="partitioners=scotch")
 
-    # Graph partitioner dependencies for "@0.1.0:0.3.0"
-    depends_on("kahip", when="+kahip")
-    depends_on("parmetis", when="+parmetis")
-    depends_on("scotch+mpi", when="@0.1.0:0.3.0")
-
     variant("slepc", default=False, description="slepc support")
     variant("adios2", default=False, description="adios2 support")
 
@@ -79,7 +56,6 @@ class FenicsDolfinx(CMakePackage):
     depends_on("boost@1.7.0:+filesystem+program_options+timer")
 
     depends_on("petsc+mpi+shared")
-    depends_on("petsc+mpi+shared@3.15.0:", when="@0.1.0")
 
     depends_on("xtensor@0.23.10:", when="@:0.5")
     depends_on("xtl@0.7.2:", when="@:0.5")
@@ -92,18 +68,11 @@ class FenicsDolfinx(CMakePackage):
     depends_on("fenics-ufcx@0.6.0:0.6", when="@0.6.0:0.6")
     depends_on("fenics-ufcx@0.5.0", when="@0.5.1:0.5")
     depends_on("fenics-ufcx@0.4.2", when="@0.4.1")
-    depends_on("py-fenics-ffcx@0.3.0", type=("build", "run"), when="@0.3.0")
-    depends_on("py-fenics-ffcx@0.3.0", type=("build", "run"), when="@0.3.0")
-    depends_on("py-fenics-ffcx@0.2.0", type=("build", "run"), when="@0.2.0")
-    depends_on("py-fenics-ffcx@0.1.0", type=("build", "run"), when="@0.1.0")
 
     depends_on("fenics-basix@main", when="@main")
     depends_on("fenics-basix@0.6.0:0.6", when="@0.6.0:0.6")
     depends_on("fenics-basix@0.5.1:0.5", when="@0.5.0:0.5")
     depends_on("fenics-basix@0.4.2", when="@0.4.1")
-    depends_on("fenics-basix@0.3.0", when="@0.3.0")
-    depends_on("fenics-basix@0.2.0", when="@0.2.0")
-    depends_on("fenics-basix@0.1.0", when="@0.1.0")
 
     conflicts(
         "%gcc@:9.10",
@@ -120,24 +89,12 @@ class FenicsDolfinx(CMakePackage):
     root_cmakelists_dir = "cpp"
 
     def cmake_args(self):
-        args = [
+        return [
             self.define("DOLFINX_SKIP_BUILD_TESTS", True),
             self.define_from_variant("DOLFINX_ENABLE_SLEPC", "slepc"),
             self.define_from_variant("DOLFINX_ENABLE_ADIOS2", "adios2"),
-        ]
-
-        if self.spec.satisfies("@0.4.0:"):
-            args += [
             self.define("DOLFINX_UFCX_PYTHON", False),
             self.define("DOLFINX_ENABLE_KAHIP", "partitioners=kahip" in self.spec),
             self.define("DOLFINX_ENABLE_PARMETIS", "partitioners=parmetis" in self.spec),
             self.define("DOLFINX_ENABLE_SCOTCH", "partitioners=scotch" in self.spec),
         ]
-
-        if self.spec.satisfies("@:0.3.0"):
-            args.append(self.define_from_variant("DOLFINX_ENABLE_KAHIP", "kahip"))
-            args.append(self.define_from_variant("DOLFINX_ENABLE_PARMETIS", "parmetis"))
-            args.append(self.define("Python3_ROOT_DIR", self.spec["python"].home))
-            args.append(self.define("Python3_FIND_STRATEGY", "LOCATION"))
-
-        return args

var/spack/repos/builtin/packages/httpie/package.py

@@ -16,25 +16,15 @@ class Httpie(PythonPackage):
     version("3.2.1", sha256="c9c0032ca3a8d62492b7231b2dd83d94becf3b71baf8a4bbcd9ed1038537e3ec")
     version("2.6.0", sha256="ef929317b239bbf0a5bb7159b4c5d2edbfc55f8a0bcf9cd24ce597daec2afca5")
     version("2.5.0", sha256="fe6a8bc50fb0635a84ebe1296a732e39357c3e1354541bf51a7057b4877e47f9")
-    version(
-        "0.9.9",
-        sha256="f1202e6fa60367e2265284a53f35bfa5917119592c2ab08277efc7fffd744fcb",
-        deprecated=True,
-    )
-    version(
-        "0.9.8",
-        sha256="515870b15231530f56fe2164190581748e8799b66ef0fe36ec9da3396f0df6e1",
-        deprecated=True,
-    )
 
-    depends_on("python@3.6:", when="@2.5:", type=("build", "run"))
+    depends_on("python@3.6:", type=("build", "run"))
     depends_on("py-charset-normalizer@2:", when="@2.6:", type=("build", "run"))
-    depends_on("py-defusedxml@0.6:", when="@2.5:", type=("build", "run"))
+    depends_on("py-defusedxml@0.6:", type=("build", "run"))
     depends_on("py-requests@2.11:", type=("build", "run"))
-    depends_on("py-requests@2.22:+socks", when="@2.5:", type=("build", "run"))
+    depends_on("py-requests@2.22:+socks", type=("build", "run"))
     depends_on("py-pygments@2.1.3:", type=("build", "run"))
-    depends_on("py-pygments@2.5.2:", when="@2.5:", type=("build", "run"))
+    depends_on("py-pygments@2.5.2:", type=("build", "run"))
-    depends_on("py-requests-toolbelt@0.9.1:", when="@2.5:", type=("build", "run"))
+    depends_on("py-requests-toolbelt@0.9.1:", type=("build", "run"))
     depends_on("py-multidict@4.7.0:", when="@3.2.1:", type=("build", "run"))
     depends_on("py-setuptools", type=("build", "run"))
     depends_on("py-importlib-metadata@1.4.0:", when="@3: ^python@:3.7", type=("build", "run"))

var/spack/repos/builtin/packages/mxnet/package.py

@@ -17,7 +17,6 @@ class Mxnet(CMakePackage, CudaPackage, PythonExtension):
     maintainers("adamjstewart")
 
     version("master", branch="master", submodules=True)
-    version("1.master", branch="v1.x", submodules=True, deprecated=True)
     version("1.9.1", sha256="11ea61328174d8c29b96f341977e03deb0bf4b0c37ace658f93e38d9eb8c9322")
     version("1.9.0", sha256="a2a99cf604d57094269cacdfc4066492b2dc886593ee02b862e034f6180f712d")
     version("1.8.0", sha256="95aff985895aba409c08d5514510ae38b88490cfb6281ab3a5ff0f5826c8db54")
@@ -67,7 +66,7 @@ class Mxnet(CMakePackage, CudaPackage, PythonExtension):
     conflicts("+nccl", when="~cuda")
     conflicts("platform=darwin target=aarch64:", when="@:1")
 
-    patch("openblas-1.7.0.patch", when="@1.7.0:1.master")
+    patch("openblas-1.7.0.patch", when="@1.7.0:1")
     patch("openblas-1.6.0.patch", when="@1.6.0")
     patch("cmake_cuda_flags.patch", when="@1.6:1.7")
     patch("parallell_shuffle.patch", when="@1.6.0")

var/spack/repos/builtin/packages/nccl/package.py

@@ -46,20 +46,10 @@ class Nccl(MakefilePackage, CudaPackage):
     version("2.4.2-1", sha256="e3dd04b22eb541394bd818e5f78ac23a09cc549690d5d55d6fccc1a36155385a")
     version("2.3.7-1", sha256="e6eff80d9d2db13c61f8452e1400ca2f098d2dfe42857cb23413ce081c5b9e9b")
     version("2.3.5-5", sha256="bac9950b4d3980c25baa8e3e4541d2dfb4d21edf32ad3b89022d04920357142f")
-    version(
-        "1.3.4-1",
-        sha256="11e4eb44555bb28b9cbad973dacb4640b82710c9769e719afc2013b63ffaf884",
-        deprecated=True,
-    )
-    version(
-        "1.3.0-1",
-        sha256="53f36151061907bdcafad1c26c1d9370a0a8400f561a83704a5138213ba51003",
-        deprecated=True,
-    )
 
     variant("cuda", default=True, description="Build with CUDA")
 
-    depends_on("rdma-core", when="@2.3.5-5:")
+    depends_on("rdma-core")
 
     # https://github.com/NVIDIA/nccl/issues/244
     patch("so_reuseport.patch", when="@2.3.7-1:2.4.8-1")

var/spack/repos/builtin/packages/py-adios/package.py

@@ -19,40 +19,10 @@ class PyAdios(PythonPackage):
 
     version("develop", branch="master")
     version("1.13.1", sha256="b1c6949918f5e69f701cabfe5987c0b286793f1057d4690f04747852544e157b")
-    version(
-        "1.13.0",
-        sha256="7b5ee8ff7a5f7215f157c484b20adb277ec0250f87510513edcc25d2c4739f50",
-        deprecated=True,
-    )
-    version(
-        "1.12.0",
-        sha256="22bc22c157322abec2d1a0817a259efd9057f88c2113e67d918a9a5ebcb3d88d",
-        deprecated=True,
-    )
-    version(
-        "1.11.1",
-        sha256="9f5c10b9471a721ba57d1cf6e5a55a7ad139a6c12da87b4dc128539e9eef370e",
-        deprecated=True,
-    )
-    version(
-        "1.11.0",
-        sha256="e89d14ccbe7181777225e0ba6c272c0941539b8ccd440e72ed5a9457441dae83",
-        deprecated=True,
-    )
-    version(
-        "1.10.0",
-        sha256="6713069259ee7bfd4d03f47640bf841874e9114bab24e7b0c58e310c42a0ec48",
-        deprecated=True,
-    )
-    version(
-        "1.9.0",
-        sha256="23b2bb70540d51ab0855af0b205ca484fd1bd963c39580c29e3133f9e6fffd46",
-        deprecated=True,
-    )
 
     variant("mpi", default=True, description="Enable MPI support")
 
-    for v in ["1.9.0", "1.10.0", "1.11.0", "1.11.1", "1.12.0", "1.13.0", "1.13.1", "develop"]:
+    for v in ["1.13.1", "develop"]:
         depends_on(
             "adios@{0} ~mpi".format(v), when="@{0} ~mpi".format(v), type=["build", "link", "run"]
         )

var/spack/repos/builtin/packages/py-archspec/package.py

@@ -17,41 +17,6 @@ class PyArchspec(PythonPackage):
 
     version("0.2.1", sha256="0974a8a95831d2d43cce906c5b79a35d5fd2bf9be478b0e3b7d83ccc51ac815e")
     version("0.2.0", sha256="6aaba5ebdb5c3633c400d8c221a6a18716da0c64b367a8509f4217b22e91a5f5")
-    version(
-        "0.1.3",
-        sha256="a1aa7abde4d4ce38d115dfd572584906fa8e192e3272b8897e7b4fa1213ec27c",
-        deprecated=True,
-    )
-    version(
-        "0.1.2",
-        sha256="8bb998370f0dc3e509d57c13724ab4109d761fd74af20da26fbe513b0fe01c46",
-        deprecated=True,
-    )
-    version(
-        "0.1.1",
-        sha256="34bafad493b41208857232e21776216d716de37ab051a6a4a1cc1653f7e26423",
-        deprecated=True,
-    )
-    version(
-        "0.1.0",
-        sha256="a4431d0bbe9c9dd7b293c39d8e7590034d512ce5f5a1278a6cbdf61b33f7202d",
-        deprecated=True,
-    )
 
-    with when("@0.1"):
-        depends_on("python@2.7:2.8,3.5:", type=("build", "run"))
-        depends_on("py-click@7.1.2:7", type=("build", "run"))
-        depends_on("py-six@1.13.0:1", type=("build", "run"))
-
-    with when("@0.2.0"):
-        depends_on("py-click@8", type=("build", "run"))
-
-    depends_on("python@3.6:", when="@0.2:", type=("build", "run"))
     depends_on("py-poetry-core@1.0.0:", type="build")
-
+    depends_on("py-click@8", type=("build", "run"))
-    def patch(self):
-        # See https://python-poetry.org/docs/pyproject/#poetry-and-pep-517
-        if self.spec.satisfies("@:0.1.3"):
-            with working_dir(self.stage.source_path):
-                filter_file("poetry>=0.12", "poetry_core>=1.0.0", "pyproject.toml")
-                filter_file("poetry.masonry.api", "poetry.core.masonry.api", "pyproject.toml")

var/spack/repos/builtin/packages/py-autopep8/package.py

@@ -18,12 +18,7 @@ class PyAutopep8(PythonPackage):
     version("1.5.7", sha256="276ced7e9e3cb22e5d7c14748384a5cf5d9002257c0ed50c0e075b68011bb6d0")
     version("1.4.4", sha256="4d8eec30cc81bc5617dbf1218201d770dc35629363547f17577c61683ccfb3ee")
     version("1.3.3", sha256="ff787bffb812818c3071784b5ce9a35f8c481a0de7ea0ce4f8b68b8788a12f30")
-    version("1.2.4", sha256="38e31e266e29808e8a65a307778ed8e402e1f0d87472009420d6d18146cdeaa2")
-    version("1.2.2", sha256="ecc51614755c7f697e83478f87eb6bbd009075a397c15080f0311aaecbbdfca8")
 
-    depends_on("python@2.6:2.8,3.2:", type=("build", "run"))
-
-    depends_on("py-pycodestyle@1.5.7:1.7.0", when="@:1.2.4", type=("build", "run"))
     depends_on("py-pycodestyle@2.3.0:", when="@1.3:", type=("build", "run"))
     depends_on("py-pycodestyle@2.4.0:", when="@1.4:", type=("build", "run"))
     depends_on("py-pycodestyle@2.7.0:", when="@1.5.6:", type=("build", "run"))

var/spack/repos/builtin/packages/py-awkward/package.py

@@ -16,7 +16,6 @@ class PyAwkward(PythonPackage):
     maintainers("vvolkl")
 
     version("main", branch="main")
-    version("master", branch="main", deprecated=True)
     version("2.1.1", sha256="fda8e1634161b8b46b151c074ff0fc631fc0feaec2ec277c4b40a2095110b0dd")
     version("2.1.0", sha256="73f7a76a1fb43e2557befee54b1381f3e6d90636983cdc54da1c2bcb9ad4c1a8")
     version("2.0.10", sha256="8dae67afe50f5cf1677b4062f9b29dc7e6893420d0af5a0649364b117a3502af")

var/spack/repos/builtin/packages/py-awkward1/package.py

@@ -1,38 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PyAwkward1(PythonPackage):
-    """DEPRECATED! This package was renamed to py-awkward."""
-
-    git = "https://github.com/scikit-hep/awkward-1.0.git"
-    url = "https://github.com/scikit-hep/awkward-1.0/archive/0.3.1.tar.gz"
-    homepage = "https://awkward-array.org"
-
-    maintainers("vvolkl")
-
-    version(
-        "1.1.2",
-        sha256="626e3a6a2a92dd67abc8692b1ebfa1b447b9594352d6ce8c86c37d7299dc4602",
-        deprecated=True,
-    )
-    version(
-        "0.3.1",
-        sha256="7126d9feab8828b0b4f4c6dbc9e28c269a91e28eef4a6033d7ebb5db21f1dab3",
-        deprecated=True,
-    )
-
-    patch("pybind11.patch")
-
-    depends_on("py-setuptools", type="build")
-
-    depends_on("python@3.6:", type=("build", "run"))
-    depends_on("py-numpy@1.13.1:", type=("build", "run"))
-    depends_on("py-pybind11", type=("build", "link"))
-    depends_on("dlpack", when="@1.0.0:")
-    depends_on("rapidjson")
-    depends_on("cmake", type="build")

var/spack/repos/builtin/packages/py-awkward1/pybind11.patch

@@ -1,14 +0,0 @@
-diff --git a/CMakeLists.txt b/CMakeLists.txt
-index fedfe3a..bf762c9 100644
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -107,7 +107,7 @@ addtest(test0074 tests/test_0074-argsort-and-sort-rawarray.cpp)
- 
- # Third tier: Python modules.
- if (PYBUILD)
--  add_subdirectory(pybind11)
-+  find_package(pybind11)
- 
-   file(GLOB LAYOUT_SOURCES "src/python/*.cpp")
-   pybind11_add_module(_ext ${LAYOUT_SOURCES})
-

var/spack/repos/builtin/packages/py-black/package.py

@@ -26,13 +26,6 @@ class PyBlack(PythonPackage):
     version("22.3.0", sha256="35020b8886c022ced9282b51b5a875b6d1ab0c387b31a065b84db7c33085ca79")
     version("22.1.0", sha256="a7c0192d35635f6fc1174be575cb7915e92e5dd629ee79fdaf0dcfa41a80afb5")
 
-    # This is the last v21 release, and it's needed to format for Python 2.7
-    version(
-        "21.12b0",
-        sha256="77b80f693a569e2e527958459634f18df9b0ba2625ba4e0c2d5da5be42e6f2b3",
-        deprecated=True,
-    )
-
     variant("colorama", default=False, description="enable colorama support")
     variant("uvloop", default=False, description="enable uvloop support")
     variant("d", default=False, description="enable blackd HTTP server")

var/spack/repos/builtin/packages/py-cdo/package.py

@@ -15,20 +15,14 @@ class PyCdo(PythonPackage):
     maintainers("Try2Code", "skosukhin")
 
     version("1.5.6", sha256="fec1a75382f01b3c9c368e8f143d98b12323e06975663f87d9b60c739ae1d335")
-    version(
-        "1.3.2",
-        sha256="9f78879d90d14134f2320565016d0d371b7dfe7ec71110fd313868ec1db34aee",
-        deprecated=True,
-    )
 
     depends_on("python@2.7:", type=("build", "run"))
 
     depends_on("py-setuptools", type="build")
     depends_on("cdo+netcdf", type="run")
     depends_on("py-netcdf4", type=("build", "run"))
-    depends_on("py-scipy", type=("build", "run"), when="@:1.4")
+    depends_on("py-xarray", type=("build", "run"))
-    depends_on("py-xarray", type=("build", "run"), when="@1.3.4:")
+    depends_on("py-six", type=("build", "run"))
-    depends_on("py-six", type=("build", "run"), when="@1.3.3:")
 
     def setup_run_environment(self, env):
         env.set("CDO", self.spec["cdo"].prefix.bin.cdo)

var/spack/repos/builtin/packages/py-codecov/package.py

@@ -1,25 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PyCodecov(PythonPackage):
-    """Hosted coverage reports for Github, Bitbucket and Gitlab."""
-
-    homepage = "https://github.com/codecov/codecov-python"
-    pypi = "codecov/codecov-2.0.15.tar.gz"
-
-    # Since codecov has been removed from PyPI, py-codecov is deprecated.
-    # The new codecov uploader can be installed with the package codecov.
-    version(
-        "2.0.15",
-        sha256="8ed8b7c6791010d359baed66f84f061bba5bd41174bf324c31311e8737602788",
-        deprecated=True,
-    )
-
-    depends_on("py-setuptools", type=("build", "run"))
-    depends_on("py-requests@2.7.9:", type=("build", "run"))
-    depends_on("py-coverage", type=("build", "run"))

var/spack/repos/builtin/packages/py-cupy/package.py

@@ -17,11 +17,6 @@ class PyCupy(PythonPackage, CudaPackage):
     pypi = "cupy/cupy-8.0.0.tar.gz"
 
     version("11.2.0", sha256="c33361f117a347a63f6996ea97446d17f1c038f1a1f533e502464235076923e2")
-    version(
-        "8.0.0",
-        sha256="d1dcba5070dfa754445d010cdc952ff6b646d5f9bdcd7a63e8246e2472c3ddb8",
-        deprecated=True,
-    )
 
     depends_on("python@3.7:", type=("build", "run"))
     depends_on("py-setuptools", type="build")

var/spack/repos/builtin/packages/py-dask/package.py

@@ -19,60 +19,21 @@ class PyDask(PythonPackage):
     version("2021.6.2", sha256="8588fcd1a42224b7cfcd2ebc8ad616734abb6b1a4517efd52d89c7dd66eb91f8")
     version("2021.4.1", sha256="195e4eeb154222ea7a1c368119b5f321ee4ec9d78531471fe0145a527f744aa8")
     version("2020.12.0", sha256="43e745afd4b464e6c0113131e430a16dce6ac42460b06e24d799093d098f7ab0")
-    version(
-        "2.16.0",
-        sha256="2af5b0dcd48ce679ce0321cf91de623f4fe376262789b951fefa3c334002f350",
-        deprecated=True,
-    )
-    version(
-        "1.2.2",
-        sha256="5e7876bae2a01b355d1969b73aeafa23310febd8c353163910b73e93dc7e492c",
-        deprecated=True,
-    )
-    version(
-        "1.1.2",
-        sha256="93b355b9a9c9a3ddbb39fab99d5759aad5cfd346f4520b87788970e80cf97256",
-        deprecated=True,
-    )
-    version(
-        "1.1.0",
-        sha256="e76088e8931b326c05a92d2658e07b94a6852b42c13a7560505a8b2354871454",
-        deprecated=True,
-    )
-    version(
-        "0.17.4",
-        sha256="c111475a3d1f8cba41c8094e1fb1831c65015390dcef0308042a11a9606a2f6d",
-        deprecated=True,
-    )
-    version(
-        "0.8.1",
-        sha256="43deb1934cd033668e5e60b735f45c9c3ee2813f87bd51c243f975e55267fa43",
-        deprecated=True,
-    )
 
     variant("array", default=True, description="Install requirements for dask.array")
-    variant("bag", default=True, description="Install requirements for dask.bag")
+    variant(
+        "bag", default=True, when="@:2021.3.0", description="Install requirements for dask.bag"
+    )
     variant("dataframe", default=True, description="Install requirements for dask.dataframe")
     variant("distributed", default=True, description="Install requirements for dask.distributed")
     variant("diagnostics", default=False, description="Install requirements for dask.diagnostics")
     variant(
         "delayed",
         default=True,
+        when="@:2021.3.0",
         description="Install requirements for dask.delayed (dask.imperative)",
     )
-    variant("yaml", default=True, description="Ensure support for YAML configuration files")
 
-    conflicts("~bag", when="@2021.3.1:")
-    conflicts("+distributed", when="@:0.4.0,0.7.6:0.8.1")
-    conflicts("+diagnostics", when="@:0.5.0")
-    conflicts("~delayed", when="@2021.3.1:")
-    conflicts("+yaml", when="@:0.17.5")
-    conflicts("~yaml", when="@2.17.1:")
-
-    depends_on("python@2.7:2.8,3.5:", type=("build", "run"))
-    depends_on("python@3.5:", type=("build", "run"), when="@2.0.0:")
-    depends_on("python@3.6:", type=("build", "run"), when="@2.7.0:")
-    depends_on("python@3.7:", type=("build", "run"), when="@2021.3.1:")
     depends_on("python@3.8:", type=("build", "run"), when="@2022.10.2:")
 
     depends_on("py-setuptools", type="build")
@@ -81,7 +42,7 @@ class PyDask(PythonPackage):
 
     # Common requirements
     depends_on("py-packaging@20:", type="build", when="@2022.10.2:")
-    depends_on("py-pyyaml", type=("build", "run"), when="@2.17.1:")
+    depends_on("py-pyyaml", type=("build", "run"))
     depends_on("py-pyyaml@5.3.1:", type=("build", "run"), when="@2022.10.2:")
     depends_on("py-cloudpickle@1.1.1:", type=("build", "run"), when="@2021.3.1:")
     depends_on("py-cloudpickle@1.5.0:", type=("build", "run"), when="@2023.4.1:")
@@ -96,148 +57,63 @@ class PyDask(PythonPackage):
     depends_on("py-importlib-metadata@4.13.0:", type=("build", "run"), when="@2023.4.0:")
 
     # Requirements for dask.array
-    depends_on("py-numpy", type=("build", "run"), when="@:0.17.1 +array")
-    depends_on("py-numpy@1.10.4:", type=("build", "run"), when="@0.17.2: +array")
-    depends_on("py-numpy@1.11.0:", type=("build", "run"), when="@0.17.3: +array")
-    depends_on("py-numpy@1.13.0:", type=("build", "run"), when="@1.2.1: +array")
     depends_on("py-numpy@1.15.1:", type=("build", "run"), when="@2020.12.0: +array")
     depends_on("py-numpy@1.16.0:", type=("build", "run"), when="@2021.3.1: +array")
     depends_on("py-numpy@1.18.0:", type=("build", "run"), when="@2022.10.2: +array")
     depends_on("py-numpy@1.21.0:", type=("build", "run"), when="@2023.4.0: +array")
-
-    depends_on("py-toolz", type=("build", "run"), when="@:0.6.1 +array")
-    depends_on("py-toolz@0.7.2:", type=("build", "run"), when="@0.7.0: +array")
-    depends_on("py-toolz@0.7.3:", type=("build", "run"), when="@0.14.1: +array")
     # The dependency on py-toolz is non-optional starting version 2021.3.1
-    depends_on("py-toolz@0.8.2:", type=("build", "run"), when="@2.13.0:2021.3.0 +array")
+    depends_on("py-toolz@0.8.2:", type=("build", "run"), when="@:2021.3.0 +array")
 
     # Requirements for dask.bag
-    depends_on("py-dill", type=("build", "run"), when="@:0.7.5 +bag")
-    depends_on("py-cloudpickle", type=("build", "run"), when="@0.7.6: +bag")
     depends_on("py-cloudpickle@0.2.1:", type=("build", "run"), when="@0.8.2: +bag")
     # The dependency on py-cloudpickle is non-optional starting version 2021.3.1
     depends_on("py-cloudpickle@0.2.2:", type=("build", "run"), when="@2.13.0:2021.3.0 +bag")
-
-    depends_on("py-fsspec@0.3.3:", type=("build", "run"), when="@2.2.0: +bag")
-    depends_on("py-fsspec@0.5.1:", type=("build", "run"), when="@2.5.0: +bag")
     # The dependency on py-fsspec is non-optional starting version 2021.3.1
-    depends_on("py-fsspec@0.6.0:", type=("build", "run"), when="@2.8.0:2021.3.0 +bag")
+    depends_on("py-fsspec@0.6.0:", type=("build", "run"), when="@:2021.3.0 +bag")
-
-    depends_on("py-toolz", type=("build", "run"), when="@:0.6.1 +bag")
-    depends_on("py-toolz@0.7.2:", type=("build", "run"), when="@0.7.0: +bag")
-    depends_on("py-toolz@0.7.3:", type=("build", "run"), when="@0.14.1: +bag")
     # The dependency on py-toolz is non-optional starting version 2021.3.1
-    depends_on("py-toolz@0.8.2:", type=("build", "run"), when="@2.13.0:2021.3.0 +bag")
+    depends_on("py-toolz@0.8.2:", type=("build", "run"), when="@:2021.3.0 +bag")
-
-    depends_on("py-partd@0.3.2:", type=("build", "run"), when="@0.6.0: +bag")
-    depends_on("py-partd@0.3.3:", type=("build", "run"), when="@0.9.0: +bag")
-    depends_on("py-partd@0.3.5:", type=("build", "run"), when="@0.10.2: +bag")
-    depends_on("py-partd@0.3.6:", type=("build", "run"), when="@0.12.0: +bag")
-    depends_on("py-partd@0.3.7:", type=("build", "run"), when="@0.13.0: +bag")
-    depends_on("py-partd@0.3.8:", type=("build", "run"), when="@0.15.0: +bag")
     # The dependency on py-partd is non-optional starting version 2021.3.1
-    depends_on("py-partd@0.3.10:", type=("build", "run"), when="@2.0.0:2021.3.0 +bag")
+    depends_on("py-partd@0.3.10:", type=("build", "run"), when="@:2021.3.0 +bag")
 
     # Requirements for dask.dataframe
-    depends_on("py-numpy", type=("build", "run"), when="@:0.17.1 +dataframe")
-    depends_on("py-numpy@1.10.4:", type=("build", "run"), when="@0.17.2: +dataframe")
-    depends_on("py-numpy@1.11.0:", type=("build", "run"), when="@0.17.3: +dataframe")
-    depends_on("py-numpy@1.13.0:", type=("build", "run"), when="@1.2.1: +dataframe")
     depends_on("py-numpy@1.15.1:", type=("build", "run"), when="@2020.12.0: +dataframe")
     depends_on("py-numpy@1.16.0:", type=("build", "run"), when="@2021.3.1: +dataframe")
     depends_on("py-numpy@1.18.0:", type=("build", "run"), when="@2022.10.2: +dataframe")
     depends_on("py-numpy@1.21.0:", type=("build", "run"), when="@2023.4.0: +dataframe")
-
-    depends_on("py-pandas@0.16.0:", type=("build", "run"), when="+dataframe")
-    depends_on("py-pandas@0.18.0:", type=("build", "run"), when="@0.9.0: +dataframe")
-    depends_on("py-pandas@0.19.0:", type=("build", "run"), when="@0.14.0: +dataframe")
-    depends_on("py-pandas@0.21.0:", type=("build", "run"), when="@1.2.1: +dataframe")
-    depends_on("py-pandas@0.23.0:", type=("build", "run"), when="@2.11.0: +dataframe")
     depends_on("py-pandas@0.25.0:", type=("build", "run"), when="@2020.12.0: +dataframe")
     depends_on("py-pandas@1.0:", type=("build", "run"), when="@2022.10.2: +dataframe")
     depends_on("py-pandas@1.3:", type=("build", "run"), when="@2023.4.0: +dataframe")
-
-    depends_on("py-toolz", type=("build", "run"), when="@:0.6.1 +dataframe")
-    depends_on("py-toolz@0.7.2:", type=("build", "run"), when="@0.7.0: +dataframe")
-    depends_on("py-toolz@0.7.3:", type=("build", "run"), when="@0.14.1: +dataframe")
     # The dependency on py-toolz is non-optional starting version 2021.3.1
-    depends_on("py-toolz@0.8.2:", type=("build", "run"), when="@2.13.0:2021.3.0 +dataframe")
+    depends_on("py-toolz@0.8.2:", type=("build", "run"), when="@:2021.3.0 +dataframe")
-
-    depends_on("py-partd@0.3.2:", type=("build", "run"), when="@0.6.0: +dataframe")
-    depends_on("py-partd@0.3.3:", type=("build", "run"), when="@0.9.0: +dataframe")
-    depends_on("py-partd@0.3.5:", type=("build", "run"), when="@0.10.2: +dataframe")
-    depends_on("py-partd@0.3.7:", type=("build", "run"), when="@0.13.0: +dataframe")
-    depends_on("py-partd@0.3.8:", type=("build", "run"), when="@0.15.0: +dataframe")
-    depends_on("py-partd@0.3.10:", type=("build", "run"), when="@2.0.0: +dataframe")
     # The dependency on py-partd is non-optional starting version 2021.3.1
-    depends_on("py-partd@0.3.10:", type=("build", "run"), when="@2.0.0:2021.3.0 +dataframe")
+    depends_on("py-partd@0.3.10:", type=("build", "run"), when="@:2021.3.0 +dataframe")
-
-    depends_on("py-cloudpickle@0.2.1:", type=("build", "run"), when="@0.8.2:2.6.0 +dataframe")
-
-    depends_on("py-fsspec@0.3.3:", type=("build", "run"), when="@2.2.0: +dataframe")
-    depends_on("py-fsspec@0.5.1:", type=("build", "run"), when="@2.5.0: +dataframe")
     # The dependency on py-fsspec is non-optional starting version 2021.3.1
-    depends_on("py-fsspec@0.6.0:", type=("build", "run"), when="@2.8.0:2021.3.0 +dataframe")
+    depends_on("py-fsspec@0.6.0:", type=("build", "run"), when="@:2021.3.0 +dataframe")
 
     # Requirements for dask.distributed
-    depends_on("py-dill", type=("build", "run"), when="@:0.7.5 +distributed")
-    depends_on("py-pyzmq", type=("build", "run"), when="@:0.7.5 +distributed")
-    depends_on("py-distributed@:2021.8.0", type=("build", "run"), when="@0.8.2:0.8 +distributed")
-    depends_on("py-distributed@1.9:2021.8.0", type=("build", "run"), when="@0.9 +distributed")
-    depends_on("py-distributed@1.10:2021.8.0", type=("build", "run"), when="@0.10 +distributed")
-    depends_on("py-distributed@1.14:2021.8.0", type=("build", "run"), when="@0.12 +distributed")
-    depends_on("py-distributed@1.15:2021.8.0", type=("build", "run"), when="@0.13 +distributed")
     depends_on(
-        "py-distributed@1.16:2021.8.0", type=("build", "run"), when="@0.14.1:0.14 +distributed"
+        "py-distributed@2020.12.0:2021.8.0", type=("build", "run"), when="@:2021.6.1 +distributed"
-    )
-    depends_on("py-distributed@1.20:2021.8.0", type=("build", "run"), when="@0.16 +distributed")
-    depends_on("py-distributed@1.21:2021.8.0", type=("build", "run"), when="@0.17 +distributed")
-    depends_on(
-        "py-distributed@1.22:2021.8.0", type=("build", "run"), when="@0.18.0:1 +distributed"
-    )
-    depends_on(
-        "py-distributed@2.0:2021.8.0", type=("build", "run"), when="@2.0.0:2020.11 +distributed"
-    )
-    depends_on(
-        "py-distributed@2020.12.0:2021.8.0",
-        type=("build", "run"),
-        when="@2020.12.0:2021.6.1 +distributed",
     )
     depends_on("py-distributed@2021.6.2", type=("build", "run"), when="@2021.6.2 +distributed")
     depends_on("py-distributed@2022.10.2", type=("build", "run"), when="@2022.10.2 +distributed")
     depends_on("py-distributed@2023.4.1", type=("build", "run"), when="@2023.4.1 +distributed")
 
     # Requirements for dask.diagnostics
-    depends_on("py-bokeh@1.0.0:", type=("build", "run"), when="@2.0.0: +diagnostics")
+    depends_on("py-bokeh@1.0.0:1,2.0.1:", type=("build", "run"), when="+diagnostics")
-    depends_on("py-bokeh@1.0.0:1,2.0.1:", type=("build", "run"), when="@2.26.0: +diagnostics")
     depends_on("py-bokeh@2.4.2:2", type=("build", "run"), when="@2022.10.2:2023.3 +diagnostics")
     depends_on("py-bokeh@2.4.2:", type=("build", "run"), when="@2023.4.0: +diagnostics")
     depends_on("py-jinja2", type=("build", "run"), when="@2022.10.2: +diagnostics")
     depends_on("py-jinja2@2.10.3", type=("build", "run"), when="@2023.4.0: +diagnostics")
 
     # Requirements for dask.delayed
-    depends_on("py-cloudpickle@0.2.1:", type=("build", "run"), when="@2.7.0: +delayed")
     # The dependency on py-cloudpickle is non-optional starting version 2021.3.1
-    depends_on("py-cloudpickle@0.2.2:", type=("build", "run"), when="@2.13.0:2021.3.0 +delayed")
+    depends_on("py-cloudpickle@0.2.2:", type=("build", "run"), when="@:2021.3.0 +delayed")
-
-    depends_on("py-toolz@0.7.2:", type=("build", "run"), when="@0.8.1: +delayed")
-    depends_on("py-toolz@0.7.3:", type=("build", "run"), when="@0.14.1: +delayed")
     # The dependency on py-toolz is non-optional starting version 2021.3.1
-    depends_on("py-toolz@0.8.2:", type=("build", "run"), when="@2.13.0:2021.3.0 +delayed")
+    depends_on("py-toolz@0.8.2:", type=("build", "run"), when="@:2021.3.0 +delayed")
-
-    # Support for YAML configuration files
-    # The dependency on py-pyyaml is non-optional starting version 2.17.1
-    depends_on("py-pyyaml", type=("build", "run"), when="@0.18.0:2.17.0 +yaml")
 
     @property
     def import_modules(self):
-        modules = ["dask"]
+        modules = ["dask", "dask.bytes"]
-
-        if self.spec.satisfies("@0.9.0:"):
-            modules.append("dask.bytes")
-
-        if self.spec.satisfies("@:0.20.2"):
-            modules.append("dask.store")
 
         if "+array" in self.spec:
             modules.append("dask.array")
@@ -245,15 +121,8 @@ def import_modules(self):
         if "+bag" in self.spec:
             modules.append("dask.bag")
 
-        if self.spec.satisfies("@:0.7.5 +distributed"):
-            modules.append("dask.distributed")
-
         if "+dataframe" in self.spec:
-            modules.append("dask.dataframe")
+            modules.extend(["dask.dataframe", "dask.dataframe.tseries", "dask.dataframe.io"])
-            if self.spec.satisfies("@0.8.2:"):
-                modules.append("dask.dataframe.tseries")
-            if self.spec.satisfies("@0.12.0:"):
-                modules.append("dask.dataframe.io")
 
         if "+diagnostics" in self.spec:
             modules.append("dask.diagnostics")

var/spack/repos/builtin/packages/py-distributed/package.py

@@ -36,20 +36,7 @@ class PyDistributed(PythonPackage):
     version("2021.6.2", sha256="d7d112a86ab049dcefa3b21fd1baea4212a2c03d22c24bd55ad38d21a7f5d148")
     version("2021.4.1", sha256="4c1b189ec5aeaf770c473f730f4a3660dc655601abd22899e8a0662303662168")
     version("2020.12.0", sha256="2a0b6acc921cd4e0143a7c4383cdcbed7defbc4bd9dc3aab0c7f1c45f14f80e1")
-    version(
-        "2.10.0",
-        sha256="2f8cca741a20f776929cbad3545f2df64cf60207fb21f774ef24aad6f6589e8b",
-        deprecated=True,
-    )
-    version(
-        "1.28.1",
-        sha256="3bd83f8b7eb5938af5f2be91ccff8984630713f36f8f66097e531a63f141c48a",
-        deprecated=True,
-    )
 
-    depends_on("python@2.7:2.8,3.5:", when="@:1", type=("build", "run"))
-    depends_on("python@3.6:", when="@2:", type=("build", "run"))
-    depends_on("python@3.7:", when="@2021.4.1:", type=("build", "run"))
     depends_on("python@3.8:", when="@2022.2.1:", type=("build", "run"))
     depends_on("py-setuptools", type="build")
     depends_on("py-setuptools@62.6:", type="build", when="@2023.4.1:")
@@ -59,25 +46,18 @@ class PyDistributed(PythonPackage):
     # Hence, no need for depends_on("py-dask", ...)
     depends_on("py-click@6.6:", type=("build", "run"))
     depends_on("py-click@8.0:", type=("build", "run"), when="@2023.4.1:")
-    depends_on("py-cloudpickle@0.2.2:", type=("build", "run"), when="@:2.16.0")
+    depends_on("py-cloudpickle@1.5.0:", type=("build", "run"))
-    depends_on("py-cloudpickle@1.3.0:", type=("build", "run"), when="@2.17.0:2.20.0")
-    depends_on("py-cloudpickle@1.5.0:", type=("build", "run"), when="@2.21.0:")
     depends_on("py-jinja2", type=("build", "run"), when="@2022.2.1:")
     depends_on("py-jinja2@2.10.3", type=("build", "run"), when="@2023.4.1:")
     depends_on("py-locket@1:", type=("build", "run"), when="@2022.2.1:")
-    depends_on("py-msgpack", type=("build", "run"), when="@:2.10.0")
+    depends_on("py-msgpack@0.6.0:", type=("build", "run"))
-    depends_on("py-msgpack@0.6.0:", type=("build", "run"), when="@2.11.0:")
     depends_on("py-msgpack@1.0.0:", type=("build", "run"), when="@2023.4.1:")
     depends_on("py-packaging@20.0:", type=("build", "run"), when="@2022.2.1:")
     depends_on("py-psutil@5.0:", type=("build", "run"))
     depends_on("py-psutil@5.7.0:", type=("build", "run"), when="@2023.4.1:")
-    depends_on("py-six", type=("build", "run"), when="@:1")
     depends_on("py-sortedcontainers@:1,2.0.2:", type=("build", "run"))
     depends_on("py-sortedcontainers@2.0.5:", type=("build", "run"), when="@2023.4.1:")
-    depends_on("py-tblib", type=("build", "run"), when="@:2.10.0")
+    depends_on("py-toolz@0.8.2:", type=("build", "run"))
-    depends_on("py-tblib@1.6.0:", type=("build", "run"), when="@2.11.0:")
-    depends_on("py-toolz@0.7.4:", type=("build", "run"), when="@:2.12.0")
-    depends_on("py-toolz@0.8.2:", type=("build", "run"), when="@2.13.0:")
     # Note that the setup.py is wrong for py-toolz, when="@2022.10.2".
     # See https://github.com/dask/distributed/pull/7309
     depends_on("py-toolz@0.10.0:", type=("build", "run"), when="@2022.10.2:")

var/spack/repos/builtin/packages/py-earthengine-api/package.py

@@ -14,19 +14,13 @@ class PyEarthengineApi(PythonPackage):
     pypi = "earthengine-api/earthengine-api-0.1.186.tar.gz"
 
     version("0.1.344", sha256="bc5a270b8296aaae8574e68dfd93fe878bc5fbe77d1c41f90bcb5e5b830ca5c8")
-    version(
-        "0.1.186",
-        sha256="ced86dc969f5db13eea91944e29c39146bacbb7026a46f4b4ac349b365979627",
-        deprecated=True,
-    )
 
     depends_on("py-setuptools", type="build")
-    depends_on("py-google-cloud-storage", when="@0.1.344:", type=("build", "run"))
+    depends_on("py-google-cloud-storage", type=("build", "run"))
-    depends_on("py-google-api-python-client@1.12.1:", when="@0.1.344:", type=("build", "run"))
+    depends_on("py-google-api-python-client@1.12.1:", type=("build", "run"))
     depends_on("py-google-api-python-client", type=("build", "run"))
     depends_on("py-google-auth@1.4.1:", type=("build", "run"))
     depends_on("py-google-auth-httplib2@0.0.3:", type=("build", "run"))
     depends_on("py-httplib2@0.9.2:0", type=("build", "run"))
-    depends_on("py-requests", when="@0.1.344:", type=("build", "run"))
+    depends_on("py-requests", type=("build", "run"))
-    depends_on("py-six", when="@:0.1.186", type=("build", "run"))
     depends_on("google-cloud-cli", type="run")

var/spack/repos/builtin/packages/py-fenics-basix/package.py

@@ -18,36 +18,18 @@ class PyFenicsBasix(PythonPackage):
     version("0.6.0", sha256="687ae53153c98facac4080dcdc7081701db1dcea8c5e7ae3feb72aec17f83304")
     version("0.5.1", sha256="69133476ac35f0bd0deccb480676030378c341d7dfb2adaca22cd16b7e1dc1cb")
     version("0.4.2", sha256="a54f5e442b7cbf3dbb6319c682f9161272557bd7f42e2b8b8ccef88bc1b7a22f")
-    version(
-        "0.3.0",
-        sha256="9b148fd2a5485c94011fc6ca977ebdef0e51782a62b3654fc044f35b60e2bd07",
-        deprecated=True,
-    )
-    version(
-        "0.2.0",
-        sha256="e1ec537737adb283717060221635092474e3f2b5b5ba79dfac74aa496bec2fcb",
-        deprecated=True,
-    )
-    version(
-        "0.1.0",
-        sha256="2ab41fe6ad4f6c42f01b17a6e7c39debb4e0ae61c334d1caebee78b741bca4e7",
-        deprecated=True,
-    )
 
     depends_on("fenics-basix@main", type=("build", "run"), when="@main")
     depends_on("fenics-basix@0.6.0", type=("build", "run"), when="@0.6.0")
     depends_on("fenics-basix@0.5.1", type=("build", "run"), when="@0.5.1")
     depends_on("fenics-basix@0.4.2", type=("build", "run"), when="@0.4.2")
-    depends_on("fenics-basix@0.3.0", type=("build", "run"), when="@0.3.0")
-    depends_on("fenics-basix@0.2.0", type=("build", "run"), when="@0.2.0")
-    depends_on("fenics-basix@0.1.0", type=("build", "run"), when="@0.1.0")
 
-    depends_on("py-setuptools@42:", type="build", when="@0.4:")
+    depends_on("py-setuptools@42:", type="build")
     depends_on("py-setuptools@40:", type="build")
     depends_on("py-numpy@1.21:", type=("build", "run"))
     depends_on("cmake@3.19:", type="build")
     depends_on("python@3.7:", type=("build", "run"))
-    depends_on("py-pybind11@2.9.1:", type="build", when="@0.4:")
+    depends_on("py-pybind11@2.9.1:", type="build")
     depends_on("py-pybind11@2.2.4:", type="build")
 
     depends_on("xtensor@0.23.10:", type="build", when="@:0.4")

var/spack/repos/builtin/packages/py-fenics-dolfinx/package.py

@@ -20,21 +20,6 @@ class PyFenicsDolfinx(PythonPackage):
     version("0.5.1", sha256="a570e3f6ed8e7c570e7e61d0e6fd44fa9dad2c5f8f1f48a6dc9ad22bacfbc973")
     version("0.5.0", sha256="503c70c01a44d1ffe48e052ca987693a49f8d201877652cabbe2a44eb3b7c040")
     version("0.4.1", sha256="68dcf29a26c750fcea5e02d8d58411e3b054313c3bf6fcbc1d0f08dd2851117f")
-    version(
-        "0.3.0",
-        sha256="4857d0fcb44a4e9bf9eb298ba5377abdee17a7ad0327448bdd06cce73d109bed",
-        deprecated=True,
-    )
-    version(
-        "0.2.0",
-        sha256="e6462fc3b9653d335c28096f9b0393f966c55a64c77ed64cc6c949406cb1f2c3",
-        deprecated=True,
-    )
-    version(
-        "0.1.0",
-        sha256="0269379769b5b6d4d1864ded64402ecaea08054c2a5793c8685ea15a59af5e33",
-        deprecated=True,
-    )
 
     depends_on("cmake@3.19:", type="build")
     depends_on("hdf5", type="build")
@@ -47,41 +32,29 @@ class PyFenicsDolfinx(PythonPackage):
     depends_on("fenics-dolfinx@0.5.1", when="@0.5.1")
     depends_on("fenics-dolfinx@0.5.0", when="@0.5.0")
     depends_on("fenics-dolfinx@0.4.1", when="@0.4.1")
-    depends_on("fenics-dolfinx@0.3.0", when="@0.3.0")
-    depends_on("fenics-dolfinx@0.2.0", when="@0.2.0")
-    depends_on("fenics-dolfinx@0.1.0", when="@0.1.0")
 
     depends_on("fenics-basix@main", type=("build", "link"), when="@main")
     depends_on("fenics-basix@0.6.0:0.6", type=("build", "link"), when="@0.6.0:0.6")
     depends_on("fenics-basix@0.5.1:0.5", type=("build", "link"), when="@0.5.0:0.5")
     depends_on("fenics-basix@0.4.2", type=("build", "link"), when="@0.4.1")
-    depends_on("fenics-basix@0.3.0", type=("build", "link"), when="@0.3.0")
-    depends_on("fenics-basix@0.2.0", type=("build", "link"), when="@0.2.0")
-    depends_on("fenics-basix@0.1.0", type=("build", "link"), when="@0.1.0")
 
     depends_on("py-fenics-ffcx@main", type=("build", "run"), when="@main")
     depends_on("py-fenics-ffcx@0.6", type=("build", "run"), when="@0.6")
     depends_on("py-fenics-ffcx@0.5.0.post0", type=("build", "run"), when="@0.5.0:0.5")
     depends_on("py-fenics-ffcx@0.4.2", type=("build", "run"), when="@0.4.1")
-    depends_on("py-fenics-ffcx@0.3.0", type=("build", "run"), when="@0.3.0")
-    depends_on("py-fenics-ffcx@0.2.0", type=("build", "run"), when="@0.2.0")
-    depends_on("py-fenics-ffcx@0.1.0", type=("build", "run"), when="@0.1.0")
 
     depends_on("py-fenics-ufl@main", type=("build", "run"), when="@main")
     depends_on("py-fenics-ufl@2023.1", type=("build", "run"), when="@0.6")
     depends_on("py-fenics-ufl@2022.2.0", type=("build", "run"), when="@0.5.0:0.5")
     depends_on("py-fenics-ufl@2022.1.0", type=("build", "run"), when="@0.4.1")
-    depends_on("py-fenics-ufl@2021.1.0", type=("build", "run"), when="@0.1:0.3.99")
 
     depends_on("py-numpy@1.21:", type=("build", "run"))
     depends_on("py-mpi4py", type=("build", "run"))
     depends_on("py-petsc4py", type=("build", "run"))
-    depends_on("py-pybind11@2.7.0:", type=("build", "run"), when="@0.4:")
+    depends_on("py-pybind11@2.7.0:", type=("build", "run"))
-    depends_on("py-pybind11@2.2.4:", type=("build", "run"))
     depends_on("xtensor@0.23.10:", type="build", when="@:0.5")
 
-    depends_on("py-setuptools@42:", type="build", when="@0.4:")
+    depends_on("py-setuptools@42:", type="build")
-    depends_on("py-setuptools@40:", type="build")
 
     depends_on("py-cffi", type=("build", "run"))
 

var/spack/repos/builtin/packages/py-fenics-ffcx/package.py

@@ -20,25 +20,9 @@ class PyFenicsFfcx(PythonPackage):
         "0.5.0.post0", sha256="039908c9998b51ba53e5deb3a97016062c262f0a4285218644304f7d3cd35882"
     )
     version("0.4.2", sha256="3be6eef064d6ef907245db5b6cc15d4e603762e68b76e53e099935ca91ef1ee4")
-    version(
-        "0.3.0",
-        sha256="33fa1a0cc5762f360033c25a99ec9462be933f8ba413279e35cd2c3b5c3e6096",
-        deprecated=True,
-    )
-    version(
-        "0.2.0",
-        sha256="f1dcd0973980706aba145274aeddeb771d2d730efcdb9b4be10adbe964f40d90",
-        deprecated=True,
-    )
-    version(
-        "0.1.0",
-        sha256="98a47906146ac892fb4a358e04cbfd04066f12d0a4cdb505a6b08ff0b1a17e89",
-        deprecated=True,
-    )
 
     depends_on("python@3.7:", type=("build", "run"))
-    depends_on("py-setuptools@58:", type=("build", "run"), when="@0.4:")
+    depends_on("py-setuptools@58:", type=("build", "run"))
-    depends_on("py-setuptools@40:", type=("build", "run"))
 
     depends_on("py-cffi", type=("build", "run"))
     depends_on("py-numpy@1.21:", type=("build", "run"))
@@ -47,12 +31,8 @@ class PyFenicsFfcx(PythonPackage):
     depends_on("py-fenics-ufl@2023.1", type=("build", "run"), when="@0.6")
     depends_on("py-fenics-ufl@2022.2.0", type=("build", "run"), when="@0.5.0:0.5")
     depends_on("py-fenics-ufl@2022.1.0", type=("build", "run"), when="@0.4.2")
-    depends_on("py-fenics-ufl@2021.1.0", type=("build", "run"), when="@0.1.0:0.3")
 
     depends_on("py-fenics-basix@main", type=("build", "run"), when="@main")
     depends_on("py-fenics-basix@0.6.0:0.6", type=("build", "run"), when="@0.6.0:0.6")
     depends_on("py-fenics-basix@0.5.1:0.5", type=("build", "run"), when="@0.5.0:0.5")
     depends_on("py-fenics-basix@0.4.2", type=("build", "run"), when="@0.4.2")
-    depends_on("py-fenics-basix@0.3.0", type=("build", "run"), when="@0.3.0")
-    depends_on("py-fenics-basix@0.2.0", type=("build", "run"), when="@0.2.0")
-    depends_on("py-fenics-basix@0.1.0", type=("build", "run"), when="@0.1.0")

var/spack/repos/builtin/packages/py-fiona/package.py

@@ -25,28 +25,17 @@ class PyFiona(PythonPackage):
     version("1.8.21", sha256="3a0edca2a7a070db405d71187214a43d2333a57b4097544a3fcc282066a58bfc")
     version("1.8.20", sha256="a70502d2857b82f749c09cb0dea3726787747933a2a1599b5ab787d74e3c143b")
     version("1.8.18", sha256="b732ece0ff8886a29c439723a3e1fc382718804bb057519d537a81308854967a")
-    version(
-        "1.8.6",
-        sha256="fa31dfe8855b9cd0b128b47a4df558f1b8eda90d2181bff1dd9854e5556efb3e",
-        deprecated=True,
-    )
-    version(
-        "1.7.12",
-        sha256="8b54eb8422d7c502bb7776b184018186bede1a489cf438a7a47f992ade6a0e51",
-        deprecated=True,
-    )
 
     # pyproject.toml
     depends_on("python@3.7:", when="@1.9:", type=("build", "link", "run"))
     depends_on("python@2.6:", when="@1.8.22:1.8", type=("build", "link", "run"))
     depends_on("python@2.6:3.10", when="@1.8.21", type=("build", "link", "run"))
-    depends_on("python@2.6:3.9", when="@1.8.12:1.8.20", type=("build", "link", "run"))
+    depends_on("python@2.6:3.9", when="@:1.8.20", type=("build", "link", "run"))
-    depends_on("python@2.6:3.8", when="@:1.8.11", type=("build", "link", "run"))
     depends_on("py-cython@0.29.29:0.29", when="@1.9:", type="build")
     depends_on("py-setuptools@61:", when="@1.9:", type="build")
     depends_on("py-attrs@19.2:", when="@1.9:", type=("build", "run"))
     depends_on("py-attrs@17:", type=("build", "run"))
-    depends_on("py-certifi", when="@1.8.18:", type=("build", "run"))
+    depends_on("py-certifi", type=("build", "run"))
     depends_on("py-click@8", when="@1.9:", type=("build", "run"))
     depends_on("py-click@4:", type=("build", "run"))
     depends_on("py-click-plugins@1:", type=("build", "run"))
@@ -63,6 +52,3 @@ class PyFiona(PythonPackage):
     depends_on("py-setuptools", when="@:1.9.1", type=("build", "run"))
     depends_on("py-munch@2.3.2:", when="@1.9.0:1.9.3", type=("build", "run"))
     depends_on("py-munch", when="@:1.8", type=("build", "run"))
-
-    # error: implicit declaration of function 'OSRFixup' is invalid in C99
-    conflicts("%apple-clang@12:", when="@:1.8.9")

var/spack/repos/builtin/packages/py-fury/package.py

@@ -21,7 +21,6 @@ class PyFury(PythonPackage):
     depends_on("vtk+python@8.1.2:8,9.0.1:", type=("build", "run"))
     depends_on("pil@5.4.1:", type=("build", "run"))
 
-    depends_on("py-codecov", type="test")
     depends_on("py-coverage", type="test")
     depends_on("py-flake8", type="test")
     depends_on("py-pytest", type="test")

var/spack/repos/builtin/packages/py-getorganelle/package.py

@@ -1,38 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PyGetorganelle(PythonPackage):
-    """Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)"""
-
-    homepage = "https://github.com/Kinggerm/GetOrganelle"
-    url = "https://github.com/Kinggerm/GetOrganelle/archive/refs/tags/1.7.5.0.tar.gz"
-
-    maintainers("dorton21")
-
-    # renamed to getorganelle
-    version(
-        "1.7.5.0",
-        sha256="c498196737726cb4c0158f23037bf301a069f5028ece729bb4d09c7d915df93d",
-        deprecated=True,
-    )
-
-    depends_on("py-setuptools", type="build")
-    depends_on("py-numpy@1.16.4:", type=("build", "run"))
-    depends_on("py-scipy@1.3.0:", type=("build", "run"))
-    depends_on("py-sympy@1.4:", type=("build", "run"))
-    depends_on("py-requests", type=("build", "run"))
-
-    depends_on("bowtie2", type="run")
-    depends_on("spades", type="run")
-    depends_on("blast-plus", type="run")
-
-    # Allow access to relevant runtime scripts
-    # I.e. get_organelle_config.py, get_organelle_from_reads.py, etc.
-    def setup_run_environment(self, env):
-        env.prepend_path("PATH", prefix)
-        env.prepend_path("PATH", prefix.Utilities)

var/spack/repos/builtin/packages/py-griddataformats/package.py

@@ -18,36 +18,9 @@ class PyGriddataformats(PythonPackage):
     maintainers("RMeli")
 
     version("1.0.1", sha256="ad2c9ab7d672a6d8c426de7d083eee4f3e2b0bd59391675d30683c768ab83cc4")
-    version(
-        "0.5.0",
-        sha256="f317ed60708de22d1b2a76ce89a00f722d903291b1055ff1018d441870c39d69",
-        deprecated=True,
-    )
-    version(
-        "0.4.1",
-        sha256="b362662c2dc475e2a3895fe044eaaa9a707bd660fd109a63dac84a47236690a3",
-        deprecated=True,
-    )
-    version(
-        "0.4.0",
-        sha256="f81d6b75aa7ebd9e8b64e14558c2d2583a0589829382beb4ef69860110261512",
-        deprecated=True,
-    )
-    version(
-        "0.3.3",
-        sha256="938f0efcb3bc2f58ec85048b933942da8a52c134170acc97cb095f09d3698fbd",
-        deprecated=True,
-    )
 
     depends_on("py-setuptools", type="build")
-
+    depends_on("python@3.8:", type=("build", "run"))
-    depends_on("python@3.8:", when="@1:", type=("build", "run"))
+    depends_on("py-numpy@1.19:", type=("build", "run"))
-
+    depends_on("py-scipy", type=("build", "run"))
-    depends_on("py-numpy@1.19:", when="@1:", type=("build", "run"))
+    depends_on("py-mrcfile", type=("build", "run"))
-    depends_on("py-scipy", when="@1:", type=("build", "run"))
-    depends_on("py-mrcfile", when="@1:", type=("build", "run"))
-
-    # Deprecated
-    depends_on("python@2.7:", when="@0", type=("build", "run"))
-    depends_on("py-numpy@1.0.3:", when="@0", type=("build", "run"))
-    depends_on("py-six", when="@0", type=("build", "run"))

var/spack/repos/builtin/packages/py-guidata/package.py

@@ -1,22 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PyGuidata(PythonPackage):
-    """Automatic graphical user interfaces generation for easy dataset editing
-    and display"""
-
-    homepage = "https://github.com/PierreRaybaut/guidata"
-    pypi = "guidata/guidata-1.7.5.zip"
-
-    version("1.7.5", sha256="531d5e9ea784120c2e14212cfbd9c63f78fc7a77bcb9c5497be984584ee455c0")
-
-    # See `doc/installation.rst`
-    depends_on("python@2.6:2,3.2:", type=("build", "run"))
-    depends_on("py-setuptools", type="build")
-    depends_on("py-pyqt5@5.5:", type=("build", "run"))
-    depends_on("py-spyder@2.0.10:", type=("build", "run"))  # TODO: spyderlib == spyder?

var/spack/repos/builtin/packages/py-guiqwt/package.py

@@ -1,23 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PyGuiqwt(PythonPackage):
-    """guiqwt is a set of tools for curve and image plotting
-    (extension to PythonQwt)"""
-
-    homepage = "https://github.com/PierreRaybaut/guiqwt"
-    pypi = "guiqwt/guiqwt-3.0.2.zip"
-
-    version("3.0.2", sha256="387c0b9430624ecc87931e33ff963785194968c9f848337eb050eca48c6cd858")
-
-    depends_on("py-setuptools", type="build")
-    depends_on("py-numpy@1.3:", type=("build", "run"))
-    depends_on("py-scipy@0.7:", type=("build", "run"))
-    depends_on("py-guidata@1.7.0:", type=("build", "run"))
-    depends_on("py-pythonqwt@0.5.0:", type=("build", "run"))
-    depends_on("pil", type=("build", "run"))

var/spack/repos/builtin/packages/py-html5lib/package.py

@@ -12,22 +12,10 @@ class PyHtml5lib(PythonPackage):
     homepage = "https://github.com/html5lib/html5lib-python"
     pypi = "html5lib/html5lib-1.1.tar.gz"
 
-    version(
+    version("1.1", sha256="b2e5b40261e20f354d198eae92afc10d750afb487ed5e50f9c4eaf07c184146f")
-        "1.1",
-        sha256="b2e5b40261e20f354d198eae92afc10d750afb487ed5e50f9c4eaf07c184146f",
-        preferred=True,
-    )
     version("1.0.1", sha256="66cb0dcfdbbc4f9c3ba1a63fdb511ffdbd4f513b2b6d81b80cd26ce6b3fb3736")
     version("0.99", sha256="aff6fd3031c563883197e5a04b7df324086ff5f358278a0386808c463a077e59")
-    version(
-        "099",
-        sha256="2612a191a8d5842bfa057e41ba50bbb9dcb722419d2408c78cff4758d0754868",
-        deprecated=True,
-    )
 
-    depends_on("python@2.6:2.8,3.2:", when="@0.99", type=("build", "run"))
-    depends_on("python@2.7:2.8,3.3:", when="@1.0.1:", type=("build", "run"))
-    depends_on("python@2.7:2.8,3.5:", when="@1.1:", type=("build", "run"))
     depends_on("py-six", type=("build", "run"))
     depends_on("py-six@1.9:", type=("build", "run"), when="@1.0.1:")
     depends_on("py-setuptools", type="build", when="@1.0.1:")

var/spack/repos/builtin/packages/py-ipython/package.py

@@ -34,53 +34,43 @@ class PyIpython(PythonPackage):
     version("7.3.0", sha256="06de667a9e406924f97781bda22d5d76bfb39762b678762d86a466e63f65dc39")
     version("5.8.0", sha256="4bac649857611baaaf76bc82c173aa542f7486446c335fe1a6c05d0d491c8906")
     version("5.1.0", sha256="7ef4694e1345913182126b219aaa4a0047e191af414256da6772cf249571b961")
-    version(
-        "3.1.0",
-        sha256="532092d3f06f82b1d8d1e5c37097eae19fcf025f8f6a4b670dd49c3c338d5624",
-        deprecated=True,
-    )
-    version(
-        "2.3.1",
-        sha256="3e98466aa2fe54540bcba9aa6e01a39f40110d67668c297340c4b9514b7cc49c",
-        deprecated=True,
-    )
 
     depends_on("python@3.9:", when="@8.13.1:", type=("build", "run"))
     depends_on("python@3.8:", when="@8:", type=("build", "run"))
     depends_on("py-setuptools@51:", when="@8:", type="build")
-    depends_on("py-setuptools@18.5:", when="@4.1:7", type="run")
+    depends_on("py-setuptools@18.5:", when="@:7", type="run")
     depends_on("py-setuptools", type="build")
 
-    depends_on("py-appnope", when="@4: platform=darwin", type=("build", "run"))
+    depends_on("py-appnope", when="platform=darwin", type=("build", "run"))
     depends_on("py-backcall", when="@7.3.0:", type=("build", "run"))
-    depends_on("py-colorama", when="@5: platform=windows", type=("build", "run"))
+    depends_on("py-colorama", when="platform=windows", type=("build", "run"))
-    depends_on("py-decorator", when="@4:", type=("build", "run"))
+    depends_on("py-decorator", type=("build", "run"))
     depends_on("py-jedi@0.16:", when="@7.18,7.20:", type=("build", "run"))
     depends_on("py-jedi@0.10:", when="@7.5:7.17,7.19", type=("build", "run"))
     depends_on("py-matplotlib-inline", when="@7.23:", type=("build", "run"))
     depends_on("py-pexpect@4.4:", when="@7.18: platform=linux", type=("build", "run"))
     depends_on("py-pexpect@4.4:", when="@7.18: platform=darwin", type=("build", "run"))
     depends_on("py-pexpect@4.4:", when="@7.18: platform=cray", type=("build", "run"))
-    depends_on("py-pexpect", when="@4: platform=linux", type=("build", "run"))
+    depends_on("py-pexpect", when="platform=linux", type=("build", "run"))
-    depends_on("py-pexpect", when="@4: platform=darwin", type=("build", "run"))
+    depends_on("py-pexpect", when="platform=darwin", type=("build", "run"))
-    depends_on("py-pexpect", when="@4: platform=cray", type=("build", "run"))
+    depends_on("py-pexpect", when="platform=cray", type=("build", "run"))
-    depends_on("py-pickleshare", when="@4:", type=("build", "run"))
+    depends_on("py-pickleshare", type=("build", "run"))
     depends_on("py-prompt-toolkit@3.0.30:3.0.36,3.0.38:3.0", when="@8.11:", type=("build", "run"))
     depends_on("py-prompt-toolkit@3.0.2:3.0", when="@8.5:", type=("build", "run"))
     depends_on("py-prompt-toolkit@2.0.0:2,3.0.2:3.0", when="@7.26:", type=("build", "run"))
     depends_on("py-prompt-toolkit@3.0.2:3.0", when="@7.18:7.25", type=("build", "run"))
     depends_on("py-prompt-toolkit@2.0.0:2.0", when="@7.5.0", type=("build", "run"))
     depends_on("py-prompt-toolkit@2.0.0:2", when="@7.0.0:7.5.0", type=("build", "run"))
-    depends_on("py-prompt-toolkit@1.0.4:1", when="@5:7.0.0", type=("build", "run"))
+    depends_on("py-prompt-toolkit@1.0.4:1", when="@:7.0.0", type=("build", "run"))
-    depends_on("py-prompt-toolkit@1.0.3:1", when="@5:7.0.0", type=("build", "run"))
+    depends_on("py-prompt-toolkit@1.0.3:1", when="@:7.0.0", type=("build", "run"))
     depends_on("py-pygments@2.4:", when="@8.1:", type=("build", "run"))
-    depends_on("py-pygments", when="@5:", type=("build", "run"))
+    depends_on("py-pygments", type=("build", "run"))
     depends_on("py-stack-data", when="@8:", type=("build", "run"))
     depends_on("py-traitlets@5:", when="@8:", type=("build", "run"))
-    depends_on("py-traitlets@4.2:", when="@5:", type=("build", "run"))
+    depends_on("py-traitlets@4.2:", type=("build", "run"))
-    depends_on("py-traitlets", when="@4:", type=("build", "run"))
+    depends_on("py-traitlets", type=("build", "run"))
     depends_on("py-typing-extensions", when="@8.12: ^python@:3.9", type=("build", "run"))
 
     # Historical dependencies
     depends_on("py-black", when="@8.0", type=("build", "run"))
-    depends_on("py-simplegeneric@0.8:", when="@4:7.0.0", type=("build", "run"))
+    depends_on("py-simplegeneric@0.8:", when="@:7.0.0", type=("build", "run"))

var/spack/repos/builtin/packages/py-keras/package.py

@@ -28,7 +28,6 @@ class PyKeras(PythonPackage):
     version("2.8.0", sha256="5e777b0101d8385d3a90fc9056f1b2f6313f2c830d2e8181828b300c9229ec0c")
     version("2.7.0", sha256="7502746467ab15184e2e267f13fbb2c3f33ba24f8e02a097d229ba376dabaa04")
     version("2.6.0", sha256="15586a3f3e1ed9182e6e0d4c0dbd052dfb7250e779ceb7e24f8839db5c63fcae")
-    version("2.5.0", commit="9c266106163390f173625c4e7b1ccb03ae145ffc", deprecated=True)
     version("2.4.3", sha256="fedd729b52572fb108a98e3d97e1bac10a81d3917d2103cc20ab2a5f03beb973")
     version("2.4.2", sha256="e26bc51b7b8fb7add452cdf6fba77d6509e6c78b9d9ef5fd32fe132c6d9182d2")
     version("2.4.1", sha256="e282cc9c5c996043b21d045765c0c5bf541c1879232a97a574c51af0ce132cb1")
@@ -41,129 +40,12 @@ class PyKeras(PythonPackage):
     version("2.2.2", sha256="468d98da104ec5c3dbb10c2ef6bb345ab154f6ca2d722d4c250ef4d6105de17a")
     version("2.2.1", sha256="0d3cb14260a3fa2f4a5c4c9efa72226ffac3b4c50135ba6edaf2b3d1d23b11ee")
     version("2.2.0", sha256="5b8499d157af217f1a5ee33589e774127ebc3e266c833c22cb5afbb0ed1734bf")
-    version(
-        "2.1.6",
-        sha256="c14af1081242c25617ade7eb62121d58d01f16e1e744bae9fc4f1f95a417716e",
-        deprecated=True,
-    )
-    version(
-        "2.1.5",
-        sha256="907ad29add1fff27342a9f4fe3e60003d450d3af41a38f22f629c7736fc8399d",
-        deprecated=True,
-    )
-    version(
-        "2.1.4",
-        sha256="7ee1fcc79072ac904a4f008d715bcb78c60250ae3cd41d99e268c60ade8d0d3a",
-        deprecated=True,
-    )
-    version(
-        "2.1.3",
-        sha256="7ca3a381523bad40a6922e88951a316664cb088fd01cea07e5ec8ada3327e3c7",
-        deprecated=True,
-    )
-    version(
-        "2.1.2",
-        sha256="3ee56fc129d9d00b1916046e50056047836f97ada59df029e5661fb34442d5e8",
-        deprecated=True,
-    )
-    version(
-        "2.1.1",
-        sha256="f0ca2458c60d9711edf4291230b31795307ad3781cb6232ff4792b53c8f55123",
-        deprecated=True,
-    )
-    version(
-        "2.1.0",
-        sha256="67a0d66c20fff99312fc280e34c8f6dc3dbb027d4a33c13c79bec3c1173f6909",
-        deprecated=True,
-    )
-    version(
-        "2.0.9",
-        sha256="6b8572cf1b4a22fd0120b7c23382ba4fa04a6f0397e02af1249be9a7309d1767",
-        deprecated=True,
-    )
-    version(
-        "2.0.8",
-        sha256="899dc6aaed366f20100b9f80cf1093ea5b43eecc74afd1dc63a4e48dfa776ab9",
-        deprecated=True,
-    )
-    version(
-        "2.0.7",
-        sha256="a6c72ee2b94be1ffefe7e77b69582b9827211f0c356b2189459711844d3634c0",
-        deprecated=True,
-    )
-    version(
-        "2.0.6",
-        sha256="0519480abe4ad18b2c2d1bc580eab75edd82c95083d341a1157952f4b00019bb",
-        deprecated=True,
-    )
-    version(
-        "2.0.5",
-        sha256="cbce24758530e070fe1b403d6d21391cbea78c037b70bf6afc1ca9f1f8269eff",
-        deprecated=True,
-    )
-    version(
-        "2.0.4",
-        sha256="1cbe62af6821963321b275d5598fd94e63c11feaa1d4deaa79c9eb9ee0e1d68a",
-        deprecated=True,
-    )
-    version(
-        "2.0.3",
-        sha256="398dbd4a95e9d3ab2b2941d3e0c19362d397a2a6c3a667ab89d3d6aad30997f4",
-        deprecated=True,
-    )
-    version(
-        "2.0.2",
-        sha256="53fd0a6e9eaca2563e13d2266eac2da478fa25092de3c665aa26e380a8126841",
-        deprecated=True,
-    )
-    version(
-        "2.0.1",
-        sha256="c5c2727518f76606794363c01430f4992e482b4ab0dc6a8fa137c896855c09a8",
-        deprecated=True,
-    )
-    version(
-        "2.0.0",
-        sha256="02846dceb36e98368f47ca090d0f5fe6828e22ece10668a07047bea4c92b157f",
-        deprecated=True,
-    )
-    version(
-        "1.2.2",
-        sha256="d2b18c4336eb9c4f0d03469870257efa7980a9b036c9d46dcf4d49e7f4487e2d",
-        deprecated=True,
-    )
-    version(
-        "1.2.1",
-        sha256="6adce75b2050608e6683c3046ef938bfdc5bfcd4c6b6c522df5e50d18e0ac7c6",
-        deprecated=True,
-    )
-    version(
-        "1.2.0",
-        sha256="33d5297cd0c280640dc5c075466995c05911bc1da35c83ae57b2a48188b605e2",
-        deprecated=True,
-    )
-    version(
-        "1.1.2",
-        sha256="cfde0a424961ead4982a7ebefd77d8ca382810b5a69b566fa64c57d8f340eeb4",
-        deprecated=True,
-    )
-    version(
-        "1.1.1",
-        sha256="be1b67f62e5119f6f24a239a865dc47e6d9aa93b97b506ba34cab7353dbc23b6",
-        deprecated=True,
-    )
-    version(
-        "1.1.0",
-        sha256="36d83b027ba9d2c9da8e1eefc28f600ca93dc03423e033b633cbac9061af8a5d",
-        deprecated=True,
-    )
 
     # Supported Python versions listed in multiple places:
     # * keras/tools/pip_package/setup.py
     # * CONTRIBUTING.md
     # * PKG-INFO
     depends_on("python@3.8:", type=("build", "run"), when="@2.12:")
-    depends_on("python@3.7:", type=("build", "run"), when="@2.7:")
-    depends_on("python@3.6:", type=("build", "run"), when="@2.4:")
     depends_on("py-setuptools", type="build")
 
     # Required dependencies listed in multiple places:
@@ -172,13 +54,13 @@ class PyKeras(PythonPackage):
     depends_on("py-absl-py", type=("build", "run"), when="@2.6:")
     depends_on("py-h5py", type=("build", "run"))
     depends_on("py-numpy", type=("build", "run"))
-    depends_on("py-pandas", type=("build", "run"), when="@2.0.9:")
+    depends_on("py-pandas", type=("build", "run"))
     depends_on("pil", type=("build", "run"))
     depends_on("py-portpicker", type=("build", "run"), when="@2.10:")
     depends_on("py-pydot", type=("build", "run"))
     depends_on("py-scipy", type=("build", "run"))
     depends_on("py-six", type=("build", "run"))
-    for minor_ver in range(5, 13):
+    for minor_ver in range(6, 13):
         depends_on(
             "py-tensorflow@2.{}".format(minor_ver),
             type=("build", "run"),
@@ -192,7 +74,6 @@ class PyKeras(PythonPackage):
     depends_on("py-pyyaml", type=("build", "run"))
     depends_on("bazel", type="build", when="@2.5:")
     depends_on("protobuf", type="build", when="@2.5:")
-    depends_on("py-theano", type=("build", "run"), when="@:2.0.7")
 
     def url_for_version(self, version):
         if version >= Version("2.6"):

var/spack/repos/builtin/packages/py-lark-parser/package.py

@@ -13,20 +13,5 @@ class PyLarkParser(PythonPackage):
     pypi = "lark-parser/lark-parser-0.6.2.tar.gz"
 
     version("0.12.0", sha256="15967db1f1214013dca65b1180745047b9be457d73da224fcda3d9dd4e96a138")
-    version(
-        "0.11.3",
-        sha256="e29ca814a98bb0f81674617d878e5f611cb993c19ea47f22c80da3569425f9bd",
-        deprecated=True,
-    )
-    version(
-        "0.7.1",
-        sha256="8455e05d062fa7f9d59a2735583cf02291545f944955c4056bf1144c4e625344",
-        deprecated=True,
-    )
-    version(
-        "0.6.2",
-        sha256="7e2934371e0e3a5daf9afc2e3ddda76117cabcd3c3f2edf7987c1e4e9b9e503c",
-        deprecated=True,
-    )
 
     depends_on("py-setuptools", type="build")

var/spack/repos/builtin/packages/py-magic/package.py

@@ -1,27 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PyMagic(PythonPackage):
-    """A python wrapper for libmagic.
-
-    .. warning::
-        DO NOT USE: this is a duplicate of py-python-magic and will be deleted.
-    """
-
-    homepage = "https://github.com/ahupp/python-magic"
-    url = "https://github.com/ahupp/python-magic/archive/0.4.15.tar.gz"
-
-    version(
-        "0.4.15",
-        sha256="6d730389249ab1e34ffb0a3c5beaa44e116687ffa081e0176dab6c59ff271593",
-        deprecated=True,
-    )
-
-    depends_on("python@2.7.0:2.7,3.5:", type=("build", "run"))
-    depends_on("py-setuptools", type="build")
-    depends_on("file", type="run")

var/spack/repos/builtin/packages/py-metpy/package.py

@@ -19,11 +19,6 @@ class PyMetpy(PythonPackage):
     import_modules = ["metpy", "metpy._vendor", "metpy.calc", "metpy.interpolate"]
 
     version("1.0.1", sha256="16fa9806facc24f31f454b898741ec5639a72ba9d4ff8a19ad0e94629d93cb95")
-    version(
-        "1.0",
-        sha256="11b043aaa4e3d35db319e96bb9967eb9f73da653e155bca2d62f838108b100dc",
-        deprecated=True,
-    )
 
     depends_on("python@3.6:", type=("build", "run"))
     depends_on("py-setuptools", type="build")
@@ -32,8 +27,7 @@ class PyMetpy(PythonPackage):
     depends_on("py-importlib-resources@1.3.0:", when="^python@:3.8", type=("build", "run"))
     depends_on("py-matplotlib@2.1.0:", type=("build", "run"))
     depends_on("py-numpy@1.16.0:", type=("build", "run"))
-    depends_on("py-pandas@0.22.0:", when="@1.0", type=("build", "run"))
+    depends_on("py-pandas@0.24.0:", type=("build", "run"))
-    depends_on("py-pandas@0.24.0:", when="@1.0.1", type=("build", "run"))
     depends_on("py-pint@0.10.1:", type=("build", "run"))
     depends_on("py-pooch@0.1:", type=("build", "run"))
     depends_on("py-pyproj@2.3.0:", type=("build", "run"))

var/spack/repos/builtin/packages/py-onnx-runtime/cms.patch

@@ -1,146 +0,0 @@
-diff -ur a/cmake/CMakeLists.txt b/cmake/CMakeLists.txt
---- a/cmake/CMakeLists.txt	2021-12-14 22:34:21.754062247 +0100
-+++ b/cmake/CMakeLists.txt	2021-12-14 22:36:18.094061909 +0100
-@@ -240,7 +240,7 @@
-   if (onnxruntime_MINIMAL_BUILD_CUSTOM_OPS)
-     add_compile_definitions(ORT_MINIMAL_BUILD_CUSTOM_OPS)
-   endif()
--  
-+
-   set(onnxruntime_REDUCED_OPS_BUILD ON)
- 
-   if (NOT onnxruntime_ENABLE_PYTHON)
-@@ -568,7 +568,7 @@
-   endif()
- endif()
- 
--if(NOT WIN32 AND NOT onnxruntime_PREFER_SYSTEM_LIB)
-+if(NOT WIN32)
-   add_subdirectory(${PROJECT_SOURCE_DIR}/external/nsync EXCLUDE_FROM_ALL)
- endif()
- # External dependencies
-@@ -596,7 +596,7 @@
-     if(NOT Protobuf_USE_STATIC_LIBS)
-       #Indeed here should be a warning, not a fatal error. ONNX Runtime itself can work in such a
-       #setting but it may cause compatibility issue when ONNX Runtime is integrated with the other ONNX ecosystem softwares.
--      message(FATAL_ERROR "Please enable Protobuf_USE_STATIC_LIBS")
-+      message(WARNING "Please enable Protobuf_USE_STATIC_LIBS")
-     endif()
-   else()
-     set(PROTOBUF_LIB protobuf::libprotobuf-lite)
-diff -ur a/include/onnxruntime/core/platform/ort_mutex.h b/include/onnxruntime/core/platform/ort_mutex.h
---- a/include/onnxruntime/core/platform/ort_mutex.h	2021-12-14 22:34:21.784062247 +0100
-+++ b/include/onnxruntime/core/platform/ort_mutex.h	2021-12-14 22:36:18.164061909 +0100
-@@ -101,7 +101,7 @@
-   return steady_clock::now() - steady_now < rel_time ? std::cv_status::no_timeout : std::cv_status::timeout;
- }
- }  // namespace onnxruntime
--#else
-+#elif !defined(__aarch64__)
- #include "nsync.h"
- #include <mutex>               //for unique_lock
- #include <condition_variable>  //for cv_status
-@@ -186,4 +186,11 @@
-   return steady_clock::now() - steady_now < rel_time ? std::cv_status::no_timeout : std::cv_status::timeout;
- }
- };  // namespace onnxruntime
-+#else
-+#include <mutex>
-+#include <condition_variable>
-+namespace onnxruntime {
-+using OrtMutex = std::mutex;
-+using OrtCondVar = std::condition_variable;
-+}  // namespace onnxruntime
- #endif
-diff -ur a/include/onnxruntime/core/session/onnxruntime_cxx_api.h b/include/onnxruntime/core/session/onnxruntime_cxx_api.h
---- a/include/onnxruntime/core/session/onnxruntime_cxx_api.h	2021-12-14 22:34:21.784062247 +0100
-+++ b/include/onnxruntime/core/session/onnxruntime_cxx_api.h	2021-12-14 22:36:18.164061909 +0100
-@@ -345,8 +345,8 @@
- 
- struct Session : Base<OrtSession> {
-   explicit Session(std::nullptr_t) {}
--  Session(Env& env, const ORTCHAR_T* model_path, const SessionOptions& options);
--  Session(Env& env, const void* model_data, size_t model_data_length, const SessionOptions& options);
-+  Session(const Env& env, const ORTCHAR_T* model_path, const SessionOptions& options);
-+  Session(const Env& env, const void* model_data, size_t model_data_length, const SessionOptions& options);
- 
-   // Run that will allocate the output values
-   std::vector<Value> Run(const RunOptions& run_options, const char* const* input_names, const Value* input_values, size_t input_count,
-diff -ur a/include/onnxruntime/core/session/onnxruntime_cxx_inline.h b/include/onnxruntime/core/session/onnxruntime_cxx_inline.h
---- a/include/onnxruntime/core/session/onnxruntime_cxx_inline.h	2021-12-14 22:34:21.784062247 +0100
-+++ b/include/onnxruntime/core/session/onnxruntime_cxx_inline.h	2021-12-14 22:36:18.164061909 +0100
-@@ -500,11 +500,11 @@
-   return *this;
- }
- 
--inline Session::Session(Env& env, const ORTCHAR_T* model_path, const SessionOptions& options) {
-+inline Session::Session(const Env& env, const ORTCHAR_T* model_path, const SessionOptions& options) {
-   ThrowOnError(GetApi().CreateSession(env, model_path, options, &p_));
- }
- 
--inline Session::Session(Env& env, const void* model_data, size_t model_data_length, const SessionOptions& options) {
-+inline Session::Session(const Env& env, const void* model_data, size_t model_data_length, const SessionOptions& options) {
-   ThrowOnError(GetApi().CreateSessionFromArray(env, model_data, model_data_length, options, &p_));
- }
- 
-diff -ur a/onnxruntime/core/mlas/lib/platform.cpp b/onnxruntime/core/mlas/lib/platform.cpp
---- a/onnxruntime/core/mlas/lib/platform.cpp	2021-12-14 22:34:21.864062247 +0100
-+++ b/onnxruntime/core/mlas/lib/platform.cpp	2021-12-14 22:36:18.244061908 +0100
-@@ -16,6 +16,7 @@
- --*/
- 
- #include "mlasi.h"
-+#include <string>
- 
- //
- // Stores the platform information.
-@@ -170,8 +171,11 @@
-         //
- 
-         uint64_t xcr0 = MlasReadExtendedControlRegister(_XCR_XFEATURE_ENABLED_MASK);
-+        const char *cpu_opt = std::getenv("MLAS_DYNAMIC_CPU_ARCH");
-+        if (cpu_opt == nullptr) cpu_opt = "99";
-+        auto opt = std::stoi(cpu_opt);
- 
--        if ((xcr0 & 0x6) == 0x6) {
-+        if (opt > 0 && (xcr0 & 0x6) == 0x6) {
- 
-             this->GemmFloatKernel = MlasGemmFloatKernelAvx;
- 
-@@ -204,7 +208,7 @@
-             __cpuid_count(7, 0, Cpuid7[0], Cpuid7[1], Cpuid7[2], Cpuid7[3]);
- #endif
- 
--            if (((Cpuid1[2] & 0x1000) != 0) && ((Cpuid7[1] & 0x20) != 0)) {
-+            if (opt > 1 && ((Cpuid1[2] & 0x1000) != 0) && ((Cpuid7[1] & 0x20) != 0)) {
- 
-                 this->GemmU8S8Operation = MlasGemmU8X8Operation<MLAS_GEMM_U8S8_KERNEL_AVX2>;
-                 this->GemmU8S8PackedOperation = MlasGemmU8X8PackedOperation<MLAS_GEMM_U8S8_KERNEL_AVX2>;
-@@ -264,7 +268,7 @@
-                 // operating system supports saving AVX512F state.
-                 //
- 
--                if (((Cpuid7[1] & 0x10000) != 0) && ((xcr0 & 0xE0) == 0xE0)) {
-+                if (opt > 2 && ((Cpuid7[1] & 0x10000) != 0) && ((xcr0 & 0xE0) == 0xE0)) {
- 
-                     this->GemmFloatKernel = MlasGemmFloatKernelAvx512F;
-                     this->GemmDoubleKernel = MlasGemmDoubleKernelAvx512F;
-diff -ur a/onnxruntime/core/platform/posix/ort_mutex.cc b/onnxruntime/core/platform/posix/ort_mutex.cc
---- a/onnxruntime/core/platform/posix/ort_mutex.cc	2021-12-14 22:34:21.874062247 +0100
-+++ b/onnxruntime/core/platform/posix/ort_mutex.cc	2021-12-14 22:36:18.254061908 +0100
-@@ -1,6 +1,7 @@
- // Copyright (c) Microsoft Corporation. All rights reserved.
- // Licensed under the MIT License.
- 
-+#if !defined(__aarch64__)
- #include "core/common/common.h"
- #include "core/platform/ort_mutex.h"
- #include <assert.h>
-@@ -40,4 +41,5 @@
-   nsync::nsync_cv_wait(&native_cv_object, lk.mutex()->native_handle());
- }
- 
--}  // namespace onnxruntime
-\ No newline at end of file
-+}  // namespace onnxruntime
-+#endif

var/spack/repos/builtin/packages/py-onnx-runtime/cms_1_10.patch

@@ -1,142 +0,0 @@
-diff --git a/cmake/CMakeLists.txt b/cmake/CMakeLists.txt
-index acbde7f56a8..eb9f7bb9fbf 100644
---- a/cmake/CMakeLists.txt
-+++ b/cmake/CMakeLists.txt
-@@ -718,7 +718,7 @@ if (onnxruntime_BUILD_BENCHMARKS)
-   endif()
- endif()
- 
--if (NOT WIN32 AND NOT onnxruntime_PREFER_SYSTEM_LIB)
-+if (NOT WIN32)
-   add_subdirectory(${PROJECT_SOURCE_DIR}/external/nsync EXCLUDE_FROM_ALL)
- endif()
- # External dependencies
-diff --git a/include/onnxruntime/core/platform/ort_mutex.h b/include/onnxruntime/core/platform/ort_mutex.h
-index e24665f5142..ddc11953fbc 100644
---- a/include/onnxruntime/core/platform/ort_mutex.h
-+++ b/include/onnxruntime/core/platform/ort_mutex.h
-@@ -101,7 +101,7 @@ std::cv_status OrtCondVar::wait_for(std::unique_lock<OrtMutex>& cond_mutex,
-   return steady_clock::now() - steady_now < rel_time ? std::cv_status::no_timeout : std::cv_status::timeout;
- }
- }  // namespace onnxruntime
--#else
-+#elif !defined(__aarch64__)
- #include "nsync.h"
- #include <mutex>               //for unique_lock
- #include <condition_variable>  //for cv_status
-@@ -186,4 +186,11 @@ std::cv_status OrtCondVar::wait_for(std::unique_lock<OrtMutex>& cond_mutex,
-   return steady_clock::now() - steady_now < rel_time ? std::cv_status::no_timeout : std::cv_status::timeout;
- }
- };  // namespace onnxruntime
-+#else
-+#include <mutex>
-+#include <condition_variable>
-+namespace onnxruntime {
-+using OrtMutex = std::mutex;
-+using OrtCondVar = std::condition_variable;
-+}  // namespace onnxruntime
- #endif
-diff --git a/include/onnxruntime/core/session/onnxruntime_cxx_api.h b/include/onnxruntime/core/session/onnxruntime_cxx_api.h
-index 048421099bd..4430185d496 100644
---- a/include/onnxruntime/core/session/onnxruntime_cxx_api.h
-+++ b/include/onnxruntime/core/session/onnxruntime_cxx_api.h
-@@ -379,9 +379,9 @@ struct ModelMetadata : Base<OrtModelMetadata> {
- */
- struct Session : Base<OrtSession> {
-   explicit Session(std::nullptr_t) {}                                                                                                        ///< Create an empty Session object, must be assigned a valid one to be used
--  Session(Env& env, const ORTCHAR_T* model_path, const SessionOptions& options);                                                             ///< Wraps OrtApi::CreateSession
--  Session(Env& env, const ORTCHAR_T* model_path, const SessionOptions& options, OrtPrepackedWeightsContainer* prepacked_weights_container);  ///< Wraps OrtApi::CreateSessionWithPrepackedWeightsContainer
--  Session(Env& env, const void* model_data, size_t model_data_length, const SessionOptions& options);                                        ///< Wraps OrtApi::CreateSessionFromArray
-+  Session(const Env& env, const ORTCHAR_T* model_path, const SessionOptions& options);                                                             ///< Wraps OrtApi::CreateSession
-+  Session(const Env& env, const ORTCHAR_T* model_path, const SessionOptions& options, OrtPrepackedWeightsContainer* prepacked_weights_container);  ///< Wraps OrtApi::CreateSessionWithPrepackedWeightsContainer
-+  Session(const Env& env, const void* model_data, size_t model_data_length, const SessionOptions& options);                                        ///< Wraps OrtApi::CreateSessionFromArray
- 
-   /** \brief Run the model returning results in an Ort allocated vector.
-   * 
-diff --git a/include/onnxruntime/core/session/onnxruntime_cxx_inline.h b/include/onnxruntime/core/session/onnxruntime_cxx_inline.h
-index 1f31dffca87..b9d2cdfc475 100644
---- a/include/onnxruntime/core/session/onnxruntime_cxx_inline.h
-+++ b/include/onnxruntime/core/session/onnxruntime_cxx_inline.h
-@@ -538,16 +538,16 @@ inline SessionOptions& SessionOptions::AppendExecutionProvider_OpenVINO(const Or
-   return *this;
- }
- 
--inline Session::Session(Env& env, const ORTCHAR_T* model_path, const SessionOptions& options) {
-+inline Session::Session(const Env& env, const ORTCHAR_T* model_path, const SessionOptions& options) {
-   ThrowOnError(GetApi().CreateSession(env, model_path, options, &p_));
- }
- 
--inline Session::Session(Env& env, const ORTCHAR_T* model_path, const SessionOptions& options,
-+inline Session::Session(const Env& env, const ORTCHAR_T* model_path, const SessionOptions& options,
-                         OrtPrepackedWeightsContainer* prepacked_weights_container) {
-   ThrowOnError(GetApi().CreateSessionWithPrepackedWeightsContainer(env, model_path, options, prepacked_weights_container, &p_));
- }
- 
--inline Session::Session(Env& env, const void* model_data, size_t model_data_length, const SessionOptions& options) {
-+inline Session::Session(const Env& env, const void* model_data, size_t model_data_length, const SessionOptions& options) {
-   ThrowOnError(GetApi().CreateSessionFromArray(env, model_data, model_data_length, options, &p_));
- }
- 
-diff --git a/onnxruntime/core/mlas/lib/platform.cpp b/onnxruntime/core/mlas/lib/platform.cpp
-index de7fee8c07a..6d97cf07a05 100644
---- a/onnxruntime/core/mlas/lib/platform.cpp
-+++ b/onnxruntime/core/mlas/lib/platform.cpp
-@@ -16,6 +16,7 @@ Module Name:
- --*/
- 
- #include "mlasi.h"
-+#include <string>
- 
- #if defined(MLAS_TARGET_POWER) && defined(__linux__)
- #include <sys/auxv.h>
-@@ -197,8 +198,11 @@ Return Value:
-         //
- 
-         uint64_t xcr0 = MlasReadExtendedControlRegister(_XCR_XFEATURE_ENABLED_MASK);
-+        const char *cpu_opt = std::getenv("MLAS_DYNAMIC_CPU_ARCH");
-+        if (cpu_opt == nullptr) cpu_opt = "99";
-+        auto opt = std::stoi(cpu_opt);
- 
--        if ((xcr0 & 0x6) == 0x6) {
-+        if (opt > 0 && (xcr0 & 0x6) == 0x6) {
- 
-             this->GemmFloatKernel = MlasGemmFloatKernelAvx;
- 
-@@ -231,7 +235,7 @@ Return Value:
-             __cpuid_count(7, 0, Cpuid7[0], Cpuid7[1], Cpuid7[2], Cpuid7[3]);
- #endif
- 
--            if (((Cpuid1[2] & 0x1000) != 0) && ((Cpuid7[1] & 0x20) != 0)) {
-+            if (opt > 1 && ((Cpuid1[2] & 0x1000) != 0) && ((Cpuid7[1] & 0x20) != 0)) {
- 
-                 this->GemmU8S8Dispatch = &MlasGemmU8S8DispatchAvx2;
-                 this->GemmU8S8Kernel = MlasGemmU8S8KernelAvx2;
-@@ -290,7 +294,7 @@ Return Value:
-                 // operating system supports saving AVX512F state.
-                 //
- 
--                if (((Cpuid7[1] & 0x10000) != 0) && ((xcr0 & 0xE0) == 0xE0)) {
-+                if (opt > 2 && ((Cpuid7[1] & 0x10000) != 0) && ((xcr0 & 0xE0) == 0xE0)) {
- 
-                     this->GemmFloatKernel = MlasGemmFloatKernelAvx512F;
-                     this->GemmDoubleKernel = MlasGemmDoubleKernelAvx512F;
-diff --git a/onnxruntime/core/platform/posix/ort_mutex.cc b/onnxruntime/core/platform/posix/ort_mutex.cc
-index 8a5d41eb360..89111c9daa5 100644
---- a/onnxruntime/core/platform/posix/ort_mutex.cc
-+++ b/onnxruntime/core/platform/posix/ort_mutex.cc
-@@ -1,6 +1,7 @@
- // Copyright (c) Microsoft Corporation. All rights reserved.
- // Licensed under the MIT License.
- 
-+#if !defined(__aarch64__)
- #include "core/common/common.h"
- #include "core/platform/ort_mutex.h"
- #include <assert.h>
-@@ -40,4 +41,5 @@ void OrtCondVar::wait(std::unique_lock<OrtMutex>& lk) {
-   nsync::nsync_cv_wait(&native_cv_object, lk.mutex()->native_handle());
- }
- 
--}  // namespace onnxruntime
-\ No newline at end of file
-+}  // namespace onnxruntime
-+#endif

var/spack/repos/builtin/packages/py-onnx-runtime/gcc11.patch

@@ -1,36 +0,0 @@
-From de4089f8cbe0baffe56a363cc3a41595cc8f0809 Mon Sep 17 00:00:00 2001
-From: ankurverma85 <31362771+ankurverma85@users.noreply.github.com>
-Date: Mon, 10 May 2021 12:50:08 -0700
-Subject: [PATCH] GCC11/Libstdc++11 Compilation fixes  (#7599)
-
-Authored-by: Ankur Verma <ankurv@microsoft.com>
----
- include/onnxruntime/core/graph/graph_nodes.h            | 2 +-
- onnxruntime/test/providers/cpu/controlflow/loop_test.cc | 1 +
- 2 files changed, 2 insertions(+), 1 deletion(-)
-
-diff --git a/include/onnxruntime/core/graph/graph_nodes.h b/include/onnxruntime/core/graph/graph_nodes.h
-index 422fe9538ea..aec603f7942 100644
---- a/include/onnxruntime/core/graph/graph_nodes.h
-+++ b/include/onnxruntime/core/graph/graph_nodes.h
-@@ -100,7 +100,7 @@ class ValidNodes {
-     using const_reference = const T&;
- 
-     /** Construct a NodeInterator and move to the first valid node. */
--    NodeIterator<TIterator>(const TIterator current, const TIterator end, const NodeFilterFunc& filter_fn) noexcept
-+    NodeIterator(const TIterator current, const TIterator end, const NodeFilterFunc& filter_fn) noexcept
-         : current_{current}, end_{end}, apply_filter_{filter_fn != nullptr}, filter_func_{&filter_fn} {
-       // skip to next valid node, stopping at end if none are found
-       while (current_ < end && (*current_ == nullptr ||
-diff --git a/onnxruntime/test/providers/cpu/controlflow/loop_test.cc b/onnxruntime/test/providers/cpu/controlflow/loop_test.cc
-index b058e9a16c7..3cf147e997c 100644
---- a/onnxruntime/test/providers/cpu/controlflow/loop_test.cc
-+++ b/onnxruntime/test/providers/cpu/controlflow/loop_test.cc
-@@ -2,6 +2,7 @@
- // Licensed under the MIT License.
- 
- #include <future>
-+#include <thread>
- #include "gtest/gtest.h"
- #include "gmock/gmock.h"
- 

var/spack/repos/builtin/packages/py-onnx-runtime/libiconv-1.10.patch

@@ -1,40 +0,0 @@
---- cmake/onnxruntime.cmake.orig	2022-10-07 16:39:05.935164330 +0200
-+++ cmake/onnxruntime.cmake	2022-10-07 16:39:56.702750071 +0200
-@@ -195,6 +195,7 @@
- target_link_libraries(onnxruntime PRIVATE
-     ${onnxruntime_INTERNAL_LIBRARIES}
-     ${onnxruntime_EXTERNAL_LIBRARIES}
-+    -liconv
- )
- 
- set_property(TARGET onnxruntime APPEND_STRING PROPERTY LINK_FLAGS ${ONNXRUNTIME_SO_LINK_FLAG} ${onnxruntime_DELAYLOAD_FLAGS})
---- cmake/onnxruntime_python.cmake.orig	2022-10-07 16:40:36.134428297 +0200
-+++ cmake/onnxruntime_python.cmake	2022-10-07 16:40:46.916340311 +0200
-@@ -156,6 +156,7 @@
-     onnxruntime_common
-     onnxruntime_flatbuffers
-     ${pybind11_lib}
-+    -liconv
- )
- 
- if (onnxruntime_ENABLE_LANGUAGE_INTEROP_OPS)
---- cmake/onnxruntime_unittests.cmake.orig	2022-10-07 16:41:33.413960900 +0200
-+++ cmake/onnxruntime_unittests.cmake	2022-10-07 16:42:35.780451977 +0200
-@@ -664,7 +664,7 @@
-   SOURCES ${all_tests} ${onnxruntime_unittest_main_src}
-   LIBS
-     onnx_test_runner_common ${onnxruntime_test_providers_libs} ${onnxruntime_test_common_libs}
--    onnx_test_data_proto nlohmann_json::nlohmann_json
-+    onnx_test_data_proto nlohmann_json::nlohmann_json -liconv
-   DEPENDS ${all_dependencies}
- )
- if(NOT MSVC)
-@@ -790,7 +790,7 @@
-   )
- endif()
- 
--target_link_libraries(onnx_test_runner PRIVATE onnx_test_runner_common ${GETOPT_LIB_WIDE} ${onnx_test_libs})
-+target_link_libraries(onnx_test_runner PRIVATE onnx_test_runner_common ${GETOPT_LIB_WIDE} ${onnx_test_libs} -liconv)
- target_include_directories(onnx_test_runner PRIVATE ${ONNXRUNTIME_ROOT})
- if (onnxruntime_USE_ROCM)
-   target_include_directories(onnx_test_runner PRIVATE ${CMAKE_CURRENT_BINARY_DIR}/amdgpu/onnxruntime ${CMAKE_CURRENT_BINARY_DIR}/amdgpu/orttraining)

var/spack/repos/builtin/packages/py-onnx-runtime/libiconv.patch

@@ -1,42 +0,0 @@
---- cmake/onnxruntime.cmake.orig	2021-08-06 12:36:32.720081500 +0200
-+++ cmake/onnxruntime.cmake	2021-08-13 18:53:30.310868700 +0200
-@@ -120,7 +120,8 @@
-     onnxruntime_common
-     onnxruntime_mlas
-     onnxruntime_flatbuffers
--    ${onnxruntime_EXTERNAL_LIBRARIES})
-+    ${onnxruntime_EXTERNAL_LIBRARIES}
-+    -liconv)
- 
- if (onnxruntime_ENABLE_LANGUAGE_INTEROP_OPS)
-   target_link_libraries(onnxruntime PRIVATE onnxruntime_language_interop onnxruntime_pyop)
---- cmake/onnxruntime_python.cmake.orig	2021-08-06 12:36:32.725148600 +0200
-+++ cmake/onnxruntime_python.cmake	2021-08-13 18:54:37.085622000 +0200
-@@ -106,6 +106,7 @@
-     onnxruntime_mlas
-     onnxruntime_flatbuffers
-     ${pybind11_lib}
-+    -liconv
- )
- 
- if (onnxruntime_ENABLE_LANGUAGE_INTEROP_OPS)
---- cmake/onnxruntime_unittests.cmake.orig	2021-08-13 19:11:58.645461300 +0200
-+++ cmake/onnxruntime_unittests.cmake	2021-08-13 19:14:18.373814800 +0200
-@@ -603,7 +603,7 @@
- AddTest(
-   TARGET onnxruntime_test_all
-   SOURCES ${all_tests} ${onnxruntime_unittest_main_src}
--  LIBS onnx_test_runner_common ${onnxruntime_test_providers_libs}  ${onnxruntime_test_common_libs}  re2::re2 onnx_test_data_proto
-+  LIBS onnx_test_runner_common ${onnxruntime_test_providers_libs}  ${onnxruntime_test_common_libs}  re2::re2 onnx_test_data_proto -liconv
-   DEPENDS ${all_dependencies}
- )
- 
-@@ -723,7 +723,7 @@
-   target_compile_options(onnx_test_runner PRIVATE "$<$<COMPILE_LANGUAGE:CUDA>:SHELL:--compiler-options /utf-8>"
-           "$<$<NOT:$<COMPILE_LANGUAGE:CUDA>>:/utf-8>")
- endif()
--target_link_libraries(onnx_test_runner PRIVATE onnx_test_runner_common ${GETOPT_LIB_WIDE} ${onnx_test_libs})
-+target_link_libraries(onnx_test_runner PRIVATE onnx_test_runner_common ${GETOPT_LIB_WIDE} ${onnx_test_libs} -liconv)
- target_include_directories(onnx_test_runner PRIVATE ${ONNXRUNTIME_ROOT})
- set_target_properties(onnx_test_runner PROPERTIES FOLDER "ONNXRuntimeTest")
- 

var/spack/repos/builtin/packages/py-onnx-runtime/package.py

@@ -1,136 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PyOnnxRuntime(CMakePackage, PythonExtension):
-    """ONNX Runtime is a performance-focused complete scoring
-    engine for Open Neural Network Exchange (ONNX) models, with
-    an open extensible architecture to continually address the
-    latest developments in AI and Deep Learning. ONNX Runtime
-    stays up to date with the ONNX standard with complete
-    implementation of all ONNX operators, and supports all
-    ONNX releases (1.2+) with both future and backwards
-    compatibility.
-
-    Deprecated in favor of py-onnxruntime.
-    """
-
-    homepage = "https://github.com/microsoft/onnxruntime"
-    git = "https://github.com/microsoft/onnxruntime.git"
-
-    version("1.10.0", tag="v1.10.0", submodules=True, deprecated=True)
-    version("1.7.2", tag="v1.7.2", submodules=True, deprecated=True)
-
-    variant("cuda", default=False, description="Build with CUDA support")
-
-    depends_on("cmake@3.1:", type="build")
-    depends_on("python", type=("build", "run"))
-    depends_on("py-pip", type="build")
-    depends_on("protobuf")
-    # https://github.com/microsoft/onnxruntime/pull/11639
-    depends_on("protobuf@:3.19", when="@:1.11")
-    depends_on("py-protobuf", type=("build", "run"))
-    depends_on("py-setuptools", type="build")
-    depends_on("py-numpy@1.16.6:", type=("build", "run"))
-    depends_on("py-sympy@1.1:", type=("build", "run"))
-    depends_on("py-packaging", type=("build", "run"))
-    depends_on("py-cerberus", type=("build", "run"))
-    depends_on("py-wheel", type="build")
-    depends_on("py-onnx", type=("build", "run"))
-    depends_on("py-flatbuffers", type=("build", "run"))
-    depends_on("zlib")
-    depends_on("libpng")
-    depends_on("py-pybind11", type="build")
-    depends_on("cuda", when="+cuda")
-    depends_on("cudnn", when="+cuda")
-    depends_on("iconv", type=("build", "link", "run"))
-    depends_on("re2+shared")
-
-    extends("python")
-    # Adopted from CMS experiment's fork of onnxruntime
-    # https://github.com/cms-externals/onnxruntime/compare/5bc92df...d594f80
-    patch("cms.patch", level=1, when="@1.7.2")
-    # https://github.com/cms-externals/onnxruntime/compare/0d9030e...7a6355a
-    patch("cms_1_10.patch", whe="@1.10")
-    # https://github.com/microsoft/onnxruntime/issues/4234#issuecomment-698077636
-    # only needed when iconv is provided by libiconv
-    patch("libiconv.patch", level=0, when="@1.7.2 ^libiconv")
-    patch("libiconv-1.10.patch", level=0, when="@1.10.0 ^libiconv")
-    # https://github.com/microsoft/onnxruntime/commit/de4089f8cbe0baffe56a363cc3a41595cc8f0809.patch
-    patch("gcc11.patch", level=1, when="@1.7.2")
-
-    dynamic_cpu_arch_values = ("NOAVX", "AVX", "AVX2", "AVX512")
-
-    variant(
-        "dynamic_cpu_arch",
-        default="AVX512",
-        values=dynamic_cpu_arch_values,
-        multi=False,
-        description="AVX support level",
-    )
-
-    generator("ninja")
-    root_cmakelists_dir = "cmake"
-    build_directory = "."
-
-    def setup_build_environment(self, env):
-        value = self.spec.variants["dynamic_cpu_arch"].value
-        value = self.dynamic_cpu_arch_values.index(value)
-        env.set("MLAS_DYNAMIC_CPU_ARCH", str(value))
-
-    def setup_run_environment(self, env):
-        value = self.spec.variants["dynamic_cpu_arch"].value
-        value = self.dynamic_cpu_arch_values.index(value)
-        env.set("MLAS_DYNAMIC_CPU_ARCH", str(value))
-
-    def cmake_args(self):
-        define = self.define
-        define_from_variant = self.define_from_variant
-
-        args = [
-            define("onnxruntime_ENABLE_PYTHON", True),
-            define("onnxruntime_BUILD_SHARED_LIB", True),
-            define_from_variant("onnxruntime_USE_CUDA", "cuda"),
-            define("onnxruntime_BUILD_CSHARP", False),
-            define("onnxruntime_USE_EIGEN_FOR_BLAS", True),
-            define("onnxruntime_USE_OPENBLAS", False),
-            define("onnxruntime_USE_MKLML", False),
-            define("onnxruntime_USE_NGRAPH", False),
-            define("onnxruntime_USE_OPENMP", False),
-            define("onnxruntime_USE_TVM", False),
-            define("onnxruntime_USE_LLVM", False),
-            define("onnxruntime_ENABLE_MICROSOFT_INTERNAL", False),
-            define("onnxruntime_USE_BRAINSLICE", False),
-            define("onnxruntime_USE_NUPHAR", False),
-            define("onnxruntime_USE_TENSORRT", False),
-            define("onnxruntime_CROSS_COMPILING", False),
-            define("onnxruntime_USE_FULL_PROTOBUF", True),
-            define("onnxruntime_DISABLE_CONTRIB_OPS", False),
-            define("onnxruntime_USE_PREINSTALLED_PROTOBUF", True),
-            define("onnxruntime_PREFER_SYSTEM_LIB", True),
-        ]
-
-        if self.spec.satisfies("+cuda"):
-            args.extend(
-                (
-                    define("onnxruntime_CUDA_VERSION", str(self.spec["cuda"].version)),
-                    define("onnxruntime_CUDA_HOME", self.spec["cuda"].prefix),
-                    define("onnxruntime_CUDNN_HOME", self.spec["cudnn"].prefix),
-                    define("CMAKE_CUDA_FLAGS", "-cudart shared"),
-                    define("CMAKE_CUDA_RUNTIME_LIBRARY", "Shared"),
-                    define("DCMAKE_TRY_COMPILE_PLATFORM_VARIABLES", "CMAKE_CUDA_RUNTIME_LIBRARY"),
-                )
-            )
-
-        return args
-
-    @run_after("install")
-    def install_python(self):
-        """Install everything from build directory."""
-        args = std_pip_args + ["--prefix=" + prefix, "."]
-        with working_dir(self.build_directory):
-            pip(*args)

var/spack/repos/builtin/packages/py-pennylane-lightning/package.py

@@ -19,11 +19,6 @@ class PyPennylaneLightning(CMakePackage, PythonExtension):
     version("master", branch="master")
     version("0.30.0", sha256="0f4032409d20d00991b5d14fe0b2b928baca4a13c5a1b16eab91f61f9273e58d")
     version("0.29.0", sha256="da9912f0286d1a54051cc19cf8bdbdcd732795636274c95f376db72a88e52d85")
-    version(
-        "0.28.0",
-        sha256="f5849c2affb5fb57aca20feb40ca829d171b07db2304fde0a37c2332c5b09e18",
-        deprecated=True,
-    )  # on Spack v0.19.0
 
     variant("blas", default=True, description="Build with BLAS support")
     variant(

var/spack/repos/builtin/packages/py-pennylane/package.py

@@ -19,11 +19,6 @@ class PyPennylane(PythonPackage):
     version("master", branch="master")
     version("0.30.0", sha256="7fe4821fbc733e3e40d7011e054bd2e31edde3151fd9539025c827a5a3579d6b")
     version("0.29.1", sha256="6ecfb305a3898347df8c539a89a67e748766941d159dbef9e34864872f13c45c")
-    version(
-        "0.28.0",
-        sha256="7736a17dc972d918e3a737ce4360d16ac84b9f9f6fca440f167de579c926c114",
-        deprecated=True,
-    )
 
     depends_on("python@3.8:", type=("build", "run"))
     depends_on("py-pip", type=("build", "run"))  # Runtime req for pennylane.about()

var/spack/repos/builtin/packages/py-pycodestyle/package.py

@@ -25,60 +25,7 @@ class PyPycodestyle(PythonPackage):
     version("2.2.0", sha256="df81dc3293e0123e2e8d1f2aaf819600e4ae287d8b3af8b72181af50257e5d9a")
     version("2.1.0", sha256="5b540e4f19b4938c082cfd13f5d778d1ad2308b337abbc687ab9335233f5f3e2")
     version("2.0.0", sha256="37f0420b14630b0eaaf452978f3a6ea4816d787c3e6dcbba6fb255030adae2e7")
-    # Versions below 2.0.0 are not on pypi
-    version(
-        "1.7.0",
-        sha256="3f62d19b5cbcbdcb7810f967dcc2fbdd090256e090c32b457e2580a841d118ef",
-        url="https://github.com/PyCQA/pycodestyle/archive/1.7.0.tar.gz",
-        deprecated=True,
-    )
-    version(
-        "1.6.2",
-        sha256="508bfd7d457046891bf4b8fbfc95ccac7995c37cdfdb3daf97bfeb7a13fa4c9c",
-        url="https://github.com/PyCQA/pycodestyle/archive/1.6.2.tar.gz",
-        deprecated=True,
-    )
-    version(
-        "1.6.1",
-        sha256="3a910a0d0d998d4c3c2b8152a4816b98938b27cc73a4433c61202449706a73c8",
-        url="https://github.com/PyCQA/pycodestyle/archive/1.6.1.tar.gz",
-        deprecated=True,
-    )
-    version(
-        "1.6",
-        sha256="5e7bb5156af311079345b5e81f8154c3e1420d723150a6cba5a70245eb0d515a",
-        url="https://github.com/PyCQA/pycodestyle/archive/1.6.tar.gz",
-        deprecated=True,
-    )
-    version(
-        "1.5.7",
-        sha256="9bf020638986f2e254823aee62cfd97e55ba08ad51503cd5ae26172c47f48401",
-        url="https://github.com/PyCQA/pycodestyle/archive/1.5.7.tar.gz",
-        deprecated=True,
-    )
-    version(
-        "1.5.6",
-        sha256="9f164c1211854678b2cb269954bc8aac2dcfa142d40c99f7bab08f9344cf3241",
-        url="https://github.com/PyCQA/pycodestyle/archive/1.5.6.tar.gz",
-        deprecated=True,
-    )
-    version(
-        "1.5.5",
-        sha256="e55204c5477a29eb094835ad6e83be292aa3e06be12e51f5b4cc67f38d0d61ba",
-        url="https://github.com/PyCQA/pycodestyle/archive/1.5.5.tar.gz",
-        deprecated=True,
-    )
-    version(
-        "1.5.4",
-        sha256="bc234f7935a350c79c953421b01163db01010f39caeddfa8602ff54f76a6fd9e",
-        url="https://github.com/PyCQA/pycodestyle/archive/1.5.4.tar.gz",
-        deprecated=True,
-    )
 
     # Most Python packages only require py-setuptools as a build dependency.
     # However, py-pycodestyle requires py-setuptools during runtime as well.
     depends_on("py-setuptools", type=("build", "run"))
-
-    depends_on("python@3.6:", when="@2.9:", type=("build", "run"))
-    depends_on("python@2.7:2.8,3.5:", when="@2.8", type=("build", "run"))
-    depends_on("python@2.7:2.8,3.4:", when="@2.7", type=("build", "run"))

var/spack/repos/builtin/packages/py-radical-utils/package.py

@@ -32,17 +32,6 @@ class PyRadicalUtils(PythonPackage):
     version("1.8.0", sha256="8582c65593f51d394fc263c6354ec5ad9cc7173369dcedfb2eef4f5e8146cf03")
     version("1.6.7", sha256="552f6c282f960ccd9d2401d686b0b3bfab35dfa94a26baeb2d3b4e45211f05a9")
 
-    version(
-        "0.45",
-        sha256="1333cff1a69532e51d4484fbac3fad6b172d415d2055a3141117c7cf8bdee6c5",
-        deprecated=True,
-    )
-    version(
-        "0.41.1",
-        sha256="582900e0434f49b69885a89bc65dc787362756e1014d52a4afac0bb61bcaa3ce",
-        deprecated=True,
-    )
-
     depends_on("py-radical-gtod", type=("build", "run"), when="@:1.13")
 
     depends_on("python@3.6:", type=("build", "run"))

var/spack/repos/builtin/packages/py-saga-python/package.py

@@ -1,27 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PySagaPython(PythonPackage):
-    """A light-weight access layer for distributed computing infrastructure.
-    DEPRECATED (Please use `py-radical-saga`)"""
-
-    homepage = "https://radical-cybertools.github.io"
-    pypi = "saga-python/saga-python-0.41.3.tar.gz"
-
-    maintainers("andre-merzky")
-
-    version(
-        "0.41.3",
-        sha256="b30961e634f32f6008e292aa1fe40560f257d5294b0cda95baac1cf5391feb5d",
-        deprecated=True,
-    )
-
-    depends_on("py-radical-utils@:0.45", type=("build", "run"))
-
-    depends_on("py-apache-libcloud", type=("build", "run"))
-    depends_on("py-setuptools", type="build")

var/spack/repos/builtin/packages/py-setuptools-cpp/package.py

@@ -26,7 +26,6 @@ class PySetuptoolsCpp(PythonPackage):
     depends_on("py-chardet", type=("build", "run"))
     depends_on("py-certifi", type=("build", "run"))
     depends_on("py-click", type=("build", "run"))
-    depends_on("py-codecov", type=("build", "run"))
     depends_on("py-coverage", type=("build", "run"))
     depends_on("py-entrypoints", type=("build", "run"))
     depends_on("py-flake8", type=("build", "run"))

var/spack/repos/builtin/packages/py-setuptools-rust/package.py

@@ -17,21 +17,11 @@ class PySetuptoolsRust(PythonPackage):
     version("1.2.0", sha256="0a4ada479e8c7e3d8bd7cb56e1a29acc2b2bb98c2325051b0cdcb57d7f056de8")
     version("0.12.1", sha256="647009e924f0ae439c7f3e0141a184a69ad247ecb9044c511dabde232d3d570e")
 
-    # Version 0.10.6 is not available on pypi and can only be found on github
-    version(
-        "0.10.6",
-        sha256="1446d3985e4aaf4cc679fda8a48a73ac1390b627c8ae1bebe7d9e08bb3b33769",
-        url="https://github.com/PyO3/setuptools-rust/archive/v0.10.6.tar.gz",
-        deprecated=True,
-    )
-
-    depends_on("python@3.7:", when="@1.2.0:", type=("build", "run"))
-    depends_on("python@3.6:", when="@0.12:", type=("build", "run"))
     depends_on("py-setuptools@62.4:", when="@1.4.0:", type=("build", "run"))
-    depends_on("py-setuptools@46.1:", when="@0.11.6:", type=("build", "run"))
+    depends_on("py-setuptools@46.1:", type=("build", "run"))
     depends_on("py-setuptools", type=("build", "run"))
     depends_on("py-setuptools-scm+toml@6.3.2:", when="@1.2.0:1.4.1", type="build")
-    depends_on("py-setuptools-scm+toml@3.4.3:", when="@0.11:1.1", type="build")
+    depends_on("py-setuptools-scm+toml@3.4.3:", when="@:1.1", type="build")
     depends_on("py-semantic-version@2.8.2:2", when="@1.2.0:", type=("build", "run"))
     depends_on("py-semantic-version@2.6.0:", type=("build", "run"))
     depends_on("py-typing-extensions@3.7.4.3:", when="@1.2.0:", type=("build", "run"))

var/spack/repos/builtin/packages/py-sfepy/package.py

@@ -18,11 +18,6 @@ class PySfepy(PythonPackage):
     git = "https://github.com/sfepy/sfepy.git"
 
     version("2021.3", sha256="b2a760b0f3277ac223ff25821a4156b48d06b3769e6a9a3bd0bffef5a43cbe17")
-    version(
-        "2017.3",
-        sha256="d13642b7abed63b83b7eaef4dfce6e84a5afc5798bc7ffa1c413e3e44b5e5996",
-        deprecated=True,
-    )
 
     variant("petsc", default=False, description="Enable PETSc support")
     variant("slepc", default=False, description="Enable SLEPc support")
@@ -37,12 +32,12 @@ class PySfepy(PythonPackage):
     depends_on("py-sympy", type="run")
     depends_on("hdf5+hl", type="run")
     depends_on("py-tables", type="run")
-    depends_on("py-meshio", type="run", when="@2021.3")
+    depends_on("py-meshio", type="run")
-    depends_on("py-psutil", type="run", when="@2021.3")
+    depends_on("py-psutil", type="run")
-    depends_on("py-pyvista", type="run", when="@2021.3")
+    depends_on("py-pyvista", type="run")
-    depends_on("py-opt-einsum", type="run", when="@2021.3")
+    depends_on("py-opt-einsum", type="run")
-    depends_on("py-dask", type="run", when="@2021.3")
+    depends_on("py-dask", type="run")
     depends_on("py-petsc4py", type="run", when="+petsc")
-    depends_on("py-slepc4py", type="run", when="+slepc @2021.3")
+    depends_on("py-slepc4py", type="run", when="+slepc")
-    depends_on("py-pyamg", type="run", when="+pyamg @2021.3")
+    depends_on("py-pyamg", type="run", when="+pyamg")
-    depends_on("mumps", type="run", when="+mumps @2021.3")
+    depends_on("mumps", type="run", when="+mumps")

var/spack/repos/builtin/packages/py-sphobjinv/package.py

@@ -13,15 +13,8 @@ class PySphobjinv(PythonPackage):
     pypi = "sphobjinv/sphobjinv-2.3.1.tar.gz"
 
     version("2.3.1", sha256="1442a47fc93587a0177be95346904e388ef85a8366f90a1835a7c3eeeb122eb7")
-    version(
-        "2.1",
-        sha256="e41950a578dfd5acae24f12c7fe12b8d5e44f9162487aaa27189ca2e5c45d30c",
-        url="https://github.com/bskinn/sphobjinv/archive/refs/tags/v2.1.tar.gz",
-        deprecated=True,
-    )
 
     depends_on("py-setuptools", type=("build", "run"))
     depends_on("py-attrs@19.2:", type=("build", "run"))
     depends_on("py-certifi", type=("build", "run"))
     depends_on("py-jsonschema@3.0:", type=("build", "run"))
-    depends_on("py-fuzzywuzzy@0.8:", when="@2.1", type=("build", "run"))

var/spack/repos/builtin/packages/py-spyder/package.py

@@ -1,46 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PySpyder(PythonPackage):
-    """Scientific PYthon Development EnviRonment"""
-
-    homepage = "https://github.com/spyder-ide/spyder"
-    pypi = "spyder/spyder-3.1.3.tar.gz"
-
-    version("3.1.3", sha256="4978872cc5a006803bc8742d0a8fb43c49aef9524f0a9fcb8bd6dfcfdc2d2d6a")
-
-    depends_on("python@2.7.0:2.8.0,3.3.0:", type=("build", "run"))
-    # pip silently replaces distutils with setuptools
-    depends_on("py-setuptools", type="build")
-    depends_on("py-rope@0.9.4:", type=("build", "run"), when="^python@:3")
-    # depends_on('py-rope_py3k',    type=('build', 'run'), when='^python@3:')
-    depends_on("py-jedi@0.9.0", type=("build", "run"))
-    # otherwise collision with py-flake8
-    depends_on("py-pyflakes@1.2.3", type=("build", "run"))
-    depends_on("py-pygments@2.0:", type=("build", "run"))
-    depends_on("py-qtconsole@4.2.0:", type=("build", "run"))
-    depends_on("py-nbconvert", type=("build", "run"))
-    depends_on("py-sphinx", type=("build", "run"))
-    # The pycodestyle dependency is split in two, because internally it
-    # changes its name from pep8 to pycodestyle, and spyder does not cope
-    # with this change until @3.2.0
-    # https://github.com/PyCQA/pycodestyle/issues/466
-    # https://github.com/spyder-ide/spyder/blob/master/CHANGELOG.md#version-32-2017-07-24
-    depends_on("py-pycodestyle@:1.7.1", when="@:3.1", type=("build", "run"))
-    depends_on("py-pycodestyle@2.1.0:", when="@3.2.0:", type=("build", "run"))
-    depends_on("py-pylint", type=("build", "run"))
-    depends_on("py-psutil", type=("build", "run"))
-    depends_on("py-qtawesome@0.4.1:", type=("build", "run"))
-    depends_on("py-qtpy@1.1.0:", type=("build", "run"))
-    # technically this is a transitive dependency in order for py-pyqt4
-    # to pick up webkit, but this is the easier solution (see #9207)
-    depends_on("qt+webkit", type=("build", "run"))
-    depends_on("py-pickleshare", type=("build", "run"))
-    depends_on("py-pyzmq", type=("build", "run"))
-    depends_on("py-chardet@2.0.0:", type=("build", "run"))
-    depends_on("py-numpydoc", type=("build", "run"))

var/spack/repos/builtin/packages/py-thirdorder/package.py

@@ -1,44 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PyThirdorder(PythonPackage):
-    """It helps ShengBTE users create FORCE_CONSTANTS_3RD files efficiently"""
-
-    homepage = "https://www.shengbte.org"
-    url = "http://www.shengbte.org/downloads/thirdorder-v1.1.1-8526f47.tar.bz2"
-
-    # Deprecated because download doesn't work
-    version(
-        "1.1.1-8526f47",
-        sha256="5e1cc8d6ffa7efdb7325c397ca236863ea8a9c5bed1c558acca68b140f89167e",
-        deprecated=True,
-    )
-
-    depends_on("py-numpy", type=("build", "run"))
-    depends_on("py-scipy", type=("build", "run"))
-    depends_on("spglib", type=("build", "run"))
-
-    def patch(self):
-        setupfile = FileFilter("setup.py")
-        setupfile.filter(
-            "LIBRARY_DIRS = .*", 'LIBRARY_DIRS = ["%s"]' % self.spec["spglib"].prefix.lib
-        )
-        setupfile.filter(
-            "INCLUDE_DIRS = .*", 'INCLUDE_DIRS = ["%s"]' % self.spec["spglib"].prefix.include
-        )
-
-        sourcefile = FileFilter("thirdorder_core.c")
-        sourcefile.filter('#include "spglib.*"', '#include "spglib.h"')
-
-    @run_after("install")
-    def post_install(self):
-        mkdirp(self.prefix.bin)
-        install("thirdorder_espresso.py", self.prefix.bin)
-        install("thirdorder_vasp.py", self.prefix.bin)
-        install("thirdorder_castep.py", self.prefix.bin)
-        install("thirdorder_common.py", self.prefix.bin)

var/spack/repos/builtin/packages/py-tomopy/package.py

@@ -17,12 +17,6 @@ class PyTomopy(PythonPackage):
 
     version("master", branch="master")
     version("1.11.0", sha256="4e5691c2b083753692ba4376ce301578037071c83fc61a6ae9e5bc9e6fcd3d1f")
-    # Never was an official 1.10.4 release, checksum doesn't match for some reason
-    version(
-        "1.10.4",
-        sha256="2f15edda11b4337a1a5560684fcf8f28a35c5035932b22b842ce728bd13fba01",
-        deprecated=True,
-    )
     version("1.0.0", sha256="ee45f7a062e5a66d6f18a904d2e204e48d85a1ce1464156f9e2f6353057dfe4c")
 
     # GPU accel needs PTL which is a git submodule. Thus, we can only build it on master

var/spack/repos/builtin/packages/py-uproot4/package.py

@@ -1,60 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-from spack.package import *
-
-
-class PyUproot4(PythonPackage):
-    """DEPRECATED! This package was renamed to py-uproot.
-
-    ROOT I/O in pure Python and NumPy."""
-
-    homepage = "https://uproot4.readthedocs.io"
-    git = "https://github.com/scikit-hep/uproot4"
-    url = "https://github.com/scikit-hep/uproot4/archive/0.0.27.tar.gz"
-
-    maintainers("vvolkl")
-
-    tags = ["hep"]
-
-    version("master", branch="master", deprecated=True)
-    version(
-        "4.0.2",
-        sha256="8145af29788cbe6bf0ee279a7f176159f3eee801641ead4ad6e627f8c4dff0a9",
-        deprecated=True,
-    )
-    version(
-        "0.1.2",
-        sha256="b32dbffadc87bc5707ee0093964d2ce4a5ccfd521b17bbf10732afc25b820d82",
-        deprecated=True,
-    )
-    version(
-        "0.0.27",
-        sha256="de87555937332998b476f3e310392962bc983bddc008ed2b3c07a25c0379c4c9",
-        deprecated=True,
-    )
-
-    variant("xrootd", default=True, description="Build with xrootd support ")
-    variant(
-        "lz4",
-        default=True,
-        description="Build with support for reading " "lz4-compressed rootfiles ",
-    )
-
-    variant(
-        "zstd",
-        default=True,
-        description="Build with support for reading " "zstd-compressed rootfiles ",
-    )
-
-    depends_on("py-setuptools", type="build")
-    depends_on("py-numpy", type=("build", "run"))
-
-    depends_on("xrootd", when="+xrootd")
-
-    depends_on("lz4", when="+lz4")
-    depends_on("xxhash", when="+lz4")
-
-    depends_on("zstd", when="+zstd")

var/spack/repos/builtin/packages/py-wandb/package.py

@@ -16,44 +16,21 @@ class PyWandb(PythonPackage):
     maintainers("thomas-bouvier")
 
     version("0.13.9", sha256="0a17365ce1f18306ce7a7f16b943094fac7284bb85f4e52c0685705602f9e307")
-    version(
-        "0.10.1",
-        sha256="d02427cda58a6618ba10a027a76d9e3f68ad923d35964b1b68785c49e5160009",
-        deprecated=True,
-    )
 
-    depends_on("python@3.6:", type=("build", "link", "run"), when="@0.13.0:")
     depends_on("py-setuptools", type=("build", "run"))
 
-    with when("@0.13.0:"):
     depends_on("py-pathtools", type=("build", "run"))
     depends_on("py-setproctitle", type=("build", "run"))
     depends_on("py-appdirs@1.4.3:", type=("build", "run"))
     depends_on("py-protobuf@3.19:4", type=("build", "run"))
     conflicts("^py-protobuf@4.21.0")
-        depends_on("py-dataclasses", type=("build", "run"), when="^python@:3.6")
     depends_on("py-typing-extensions", type=("build", "run"), when="^python@:3.9")
 
-    with when("@0.10.1"):
-        depends_on("py-gql", type=("build", "run"))
-        depends_on("py-nvidia-ml-py3", type=("build", "run"))
-        depends_on("py-python-dateutil", type=("build", "run"))
-        depends_on("py-shortuuid", type=("build", "run"))
-        depends_on("py-six", type=("build", "run"))
-        depends_on("py-watchdog", type=("build", "run"))
-        depends_on("py-configparser", type=("build", "run"))
-
     depends_on("py-pyyaml", type=("build", "run"))
-    depends_on("py-click", type=("build", "run"))
+    depends_on("py-click@7:", type=("build", "run"))
-    depends_on("py-click@7:", type=("build", "run"), when="@0.13.0:")
     conflicts("^py-click@8.0.0")
-    depends_on("py-gitpython", type=("build", "run"))
+    depends_on("py-gitpython@1:", type=("build", "run"))
-    depends_on("py-gitpython@1:", type=("build", "run"), when="@0.13.0:")
+    depends_on("py-requests@2", type=("build", "run"))
-    depends_on("py-requests", type=("build", "run"))
+    depends_on("py-psutil@5:", type=("build", "run"))
-    depends_on("py-requests@2", type=("build", "run"), when="@0.13.0:")
+    depends_on("py-sentry-sdk@1.0.0:", type=("build", "run"))
-    depends_on("py-psutil", type=("build", "run"))
+    depends_on("py-dockerpy-creds@0.4.0:", type=("build", "run"))
-    depends_on("py-psutil@5:", type=("build", "run"), when="@0.13.0:")
-    depends_on("py-sentry-sdk", type=("build", "run"))
-    depends_on("py-sentry-sdk@1.0.0:", type=("build", "run"), when="@0.13.0:")
-    depends_on("py-dockerpy-creds", type=("build", "run"))
-    depends_on("py-dockerpy-creds@0.4.0:", type=("build", "run"), when="@0.13.0:")