gemma: add new package. (#31078)
Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>
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var/spack/repos/builtin/packages/gemma/package.py
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var/spack/repos/builtin/packages/gemma/package.py
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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Gemma(MakefilePackage):
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"""GEMMA is a software toolkit for fast application of linear mixed models
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(LMMs) and related models to genome-wide association studies (GWAS) and
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other large-scale data sets."""
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homepage = "https://github.com/genetics-statistics/GEMMA"
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url = "https://github.com/genetics-statistics/GEMMA/archive/refs/tags/v0.98.5.tar.gz"
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maintainers = ['snehring', 'dlkuehn']
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version('0.98.5', sha256='3ed336deee29e370f96ec8f1a240f7b62550e57dcd1694245ce7ec8f42241677')
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depends_on('zlib')
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# openblas is the default
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# other lapack implementors can be made to work
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# but must provide cblas, blas, and lapack libs
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depends_on('openblas')
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depends_on('gsl@2:')
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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install('bin/gemma', prefix.bin)
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