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r-xde: created new package (#6185)

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Yifan Zhu
2017-11-08 14:57:46 -06:00
committed by Christoph Junghans
parent 3943bc945b
commit 98baf49ba6
1 changed files with 43 additions and 0 deletions
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var/spack/repos/builtin/packages/r-xde/package.py Normal file
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##############################################################################
# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class RXde(RPackage):
"""Multi-level model for cross-study detection of differential gene
expression."""
homepage = "https://www.bioconductor.org/packages/XDE/"
url = "https://git.bioconductor.org/packages/XDE"
version('2.22.0', git='https://git.bioconductor.org/packages/XDE', commit='25bcec965ae42a410dd285a9db9be46d112d8e81')
depends_on('r-biobase', type=('build', 'run'))
depends_on('r-biocgenerics', type=('build', 'run'))
depends_on('r-genefilter', type=('build', 'run'))
depends_on('r-gtools', type=('build', 'run'))
depends_on('r-mergemaid', type=('build', 'run'))
depends_on('r-mvtnorm', type=('build', 'run'))
depends_on('r@3.4.0:3.4.9', when='@2.22.0')